Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
FLH200649.01F
Keyword:
None
Species:
Vibrio cholerae O1 biovar El Tor str. N16961
Type:
cDNA
Vector Name:
pDONR221
Format: 
FUSION
Source:
HIP
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
HIP
VcCD00020060
Price: 
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 2457nts
Open reading frame: 1 to 2457

ATGAGTGTGAATGTATCAACCGTACAACCACAAAGTATCGGCTTAAAAACTCGTTATGCA
CCACTCGATTGGTGTTACCAGTTAGCCAGTCAGCACATGGATTACGATATTGTGATGTGG
CAATCACTGGTGGGAAATTCTCGCTCGATTACCAAGCCCGACGATTTTCTTGAGTACTTG
CCTTTGACTCAGCGCGAGCATGCCGCGGGCTTTTTCGTGCAAGCAGATTTGGCGCCACAG
AGTCTCAATACCTTATTGGTGAGCGCCGAAAAGCTGGTGGCCTTAGTCGCGTTTTCGGTT
GACGAAGTGAGTAGCCAGCTTGTTCGAGGGACGATTACGCCATTACTGATTTTCCATTCT
GGTATGGAATCCGCCTTTGCCTTTGATGCTTTATTTGATAATGACCATCATGGAGTTGTG
ATTACCGATGATCAAACGCGAATTTTGGCGTGCAATCGTTATTTTGAGCAGCAAACGGGA
TATCAACAAAATGAGCTACTGGGGTTAAAAACCAGTATGTTCAATTCGGGCAAACATTCG
CAGCATTTCTATGTGGATATGTGGCAGCAATTGCGTGAGCAAGGCGGCTGGAGCGGCACG
ATTTTATCTCAGCGCGCTTCTGGTGAAGTCTGGCCACAAGACCTATCTATTAAACGTTTA
AGTCCTCAGAAAGGACAGATCTTTTATATCGGCTTTACCACGGATCTGGCACCGCATTTG
GATCGCGTACTGGATAAGCAAGCGGGCGATGTCGAATTGCTGACACAATTACCGACGCTG
TCTAAATTCAGTGATCAGTTGAAACAGCGTTTACCTAAGCAGCAAACCACCACTGGATTT
GTGTTGGCGATACAGCCTAAATTCAGCAGCGATAAATACTATGCGCAGATCCGCCGGCTG
GCTGCCAGTTTGGCGCAGAACCGGCAAGTGCAACTGTGTGGTTATCACGGTGAAGGGATT
TTTCTGTGTCAGTTGGATGCGGAGAAAAACCTAGAAGCTCAGCCTTTGGTAGGGTTACAG
CGCACTTTACGCCAGTTTTTTATTGAGTTGCGACAACGAGGTGGGCAGGAAGCTCATCAA
GCCGTTGCTAAGGGGCGTTTAGGGGTTTCGGTGTTAAATGTGGATACCGATAAAATAGAG
CGCCTCGTTCCCCATGCCATCCAAGCCATGTTGGAGCACCACGCGGGGGAAACTCGACAT
ATCAACTTTTATGATCGCGCAATCCATCAGCAGATTGAGCGTCGTAAAACACTGGAAAAA
TGGGTGCAGAAATGGATAGCAAATGGCGATGTCGAAGTGTTTTATCAGCCCATTGTGGAT
AGCCAGAGTTGGTCTGTGGTGAAGTTTGAGGCGCTGTGCCGTTTTCAAGCTCCTGAGCTT
TTACATGCATCAACGCAAGAGTTAATTTCGATAGCCGAAGATCTGGGGCTGATCAATCAG
TTGGATGAGTTGATTGGCGGTAAAGCCTTAAAGGATCTGCCTAAAATTCACGCTTTATTT
GGTCACCATGTGGGAGTCAGCATCAATCGTTCGTTAAACAGCGACTTGAGTGCTGAGCAG
ATTTTACAAAGCGTGGTTGACATGCTCGCTGAAACGCCGACTTTGGCGAAAAATATCACG
GTGGAGTTAACGGAAACGGCTTACTTTGACTCTCAATCACAGGGAGGCGAAGTGCTGCAG
CATTTACGAAATCGTGGAGTCACTGTTGCGATTGATGATTTTGGAACGGGCTTTTCTTCG
TTCTCTTACCTCACGGAGTGTCAGTTTGATTATTTGAAAATCGATAGAGAGTTTGTGACC
AATATCGAAGTGGGGTCACGCCGCTACGCCATCGTAAAAATGGTGACCGATCTTGCCCAT
ACTTTGGGTGTTAAGGTTGTCGCCGAAGGAGTAGAGACTGAACATGAAGTGTATGTCCTC
AAGTCGCTGGGGGTAGATCTATTACAGGGATTCTTTTTCGCCAAGCCTTTGCCACTGAGT
AACCTTATTCATGCCTCGGATTATCGTAAACATCTTAAGCTGACCAACCGTGAATCCGAT
AAGCAATCACGCGAAATTACAACACTGCAAAGTTTAGCGATTTTCACTCAATATCGGCTC
GACCCCGGAGATCCACTCTCGTTGGCGGTGGAATACTTTAACGCGGTGCAGTCCGATGTT
TTACCGGTTGTTACGGCTGGAGAATGTGTCGGCTTGGTGGATAGAGCCGCGCTGAATTTA
CACCTCACGCCGACGATGGGCACCGAATTGGAAACGGCACGTGAAGCCGCTATTTGGCGC
AAACCCGTCAATCAAATCATGCGCACGCCGCAAGTCAAACTGGCTCATGATACAGACCTC
AAGCTATTAGCCTCGTTGCTCAAAACTAATCCACCGCCACCTTGGGTTTTAGTCGAGGGT
AATAAATACAAAGGGATTGTGACTGCGCCGCGTCTGCTCGCTTATTTAGCGAGTTTG

Protein sequence predicted based on nucleotide sequence

MSVNVSTVQPQSIGLKTRYAPLDWCYQLASQHMDYDIVMWQSLVGNSRSITKPDDFLEYL
PLTQREHAAGFFVQADLAPQSLNTLLVSAEKLVALVAFSVDEVSSQLVRGTITPLLIFHS
GMESAFAFDALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHS
QHFYVDMWQQLREQGGWSGTILSQRASGEVWPQDLSIKRLSPQKGQIFYIGFTTDLAPHL
DRVLDKQAGDVELLTQLPTLSKFSDQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRL
AASLAQNRQVQLCGYHGEGIFLCQLDAEKNLEAQPLVGLQRTLRQFFIELRQRGGQEAHQ
AVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTLEK
WVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPELLHASTQELISIAEDLGLINQ
LDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAETPTLAKNIT
VELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDREFVT
NIEVGSRRYAIVKMVTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKPLPLS
NLIHASDYRKHLKLTNRESDKQSREITTLQSLAIFTQYRLDPGDPLSLAVEYFNAVQSDV
LPVVTAGECVGLVDRAALNLHLTPTMGTELETAREAAIWRKPVNQIMRTPQVKLAHDTDL
KLLASLLKTNPPPPWVLVEGNKYKGIVTAPRLLAYLASL

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 2457
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable