Gene: |
Gene Symbol:
SERPINE1 Gene Name:  serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 Sequence Map: pDNR-Dual_with_human_insert.pdf |
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Original Clone ID: | FLH016836.01L |
Keyword: | None |
Species: | Homo sapiens |
Type: | cDNA |
Vector Name: | pDNR-Dual Format: FUSION |
Source: | HIP |
Description: | None |
Comments: | None |
Mutation/ Discrepancy : |
No / No |
Publications: |
PMID: 16512675 Title: Functional proteomics approach to investigate the biological activities of cDNAs implicated in breast cancer. |
Authors: |
HIP |
HsCD00002398 Price: Login for Pricing AVAILABLE No restriction Special MTA: None |
Insert sequence: 1209nts
Open reading frame : 1 to 1209 Reference Sequence Alignment ATGCAGATGTCTCCAGCCCTCACCTGCCTAGTCCTGGGCCTGGCCCTTGTCTTTGGTGAA
GGGTCTGCTGTGCACCATCCCCCATCCTACGTGGCCCACCTGGCCTCAGACTTCGGGGTG
AGGGTGTTTCAGCAGGTGGCGCAGGCCTCCAAGGACCGCAACGTGGTTTTCTCACCCTAT
GGGGTGGCCTCGGTGTTGGCCATGCTCCAGCTGACAACAGGAGGAGAAACCCAGCAGCAG
ATTCAAGCAGCTATGGGATTCAAGATTGATGACAAGGGCATGGCCCCCGCCCTCCGGCAT
CTGTACAAGGAGCTCATGGGGCCATGGAACAAGGATGAGATCAGCACCACAGACGCGATC
TTCGTCCAGCGGGATCTGAAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAGGCTGTTC
CGGAGCACGGTCAAGCAAGTGGACTTTTCAGAGGTGGAGAGAGCCAGATTCATCATCAAT
GACTGGGTGAAGACACACACAAAAGGTATGATCAGCAACTTGCTTGGGAAAGGAGCCGTG
GACCAGCTGACACGGCTGGTGCTGGTGAATGCCCTCTACTTCAACGGCCAGTGGAAGACT
CCCTTCCCCGACTCCAGCACCCACCGCCGCCTCTTCCACAAATCAGACGGCAGCACTGTC
TCTGTGCCCATGATGGCTCAGACCAACAAGTTCAACTATACTGAGTTCACCACGCCCGAT
GGCCATTACTACGACATCCTGGAACTGCCCTACCACGGGGACACCCTCAGCATGTTCATT
GCTGCCCCTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGAGTGCCCAG
CTCATCAGCCACTGGAAAGGCAACATGACCAGGCTGCCCCGCCTCCTGGTTCTGCCCAAG
TTCTCCCTGGAGACTGAAGTCGACCTCAGGAAGCCCCTAGAGAACCTGGGAATGACCGAC
ATGTTCAGACAGTTTCAGGCTGACTTCACGAGTCTTTCAGACCAAGAGCCTCTCCACGTC
GCGCAGGCGCTGCAGAAAGTGAAGATCGAGGTGAACGAGAGTGGCACGGTGGCCTCCTCA
TCCACAGCTGTCATAGTCTCAGCCCGCATGGCCCCCGAGGAGATCATCATGGACAGACCC
TTCCTCTTTGTGGTCCGGCACAACCCCACAGGAACAGTCCTTTTCATGGGCCAAGTGATG
GAACCCTTG
|
Coding Sequence Details | |
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Insert Sequence Verified?: Y | Verification Method: Sequence Verification |
Reference Sequence Annotations: End on reference sequence 1331 Start on reference sequence 123 |
|
Mutations: None |
Discrepancy: None |
5' Linker Sequence:
5P GCGGCCGCATAACTTCGTATAGCATACATTATACGAAGTTATCAGTC GACACC(ATG-GOI) |
|
3' Linker Sequence:
5p (goi-stop)GGAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC |
Distributed in bacterial strain : | DH5-alpha T1 phage resistant |
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Antibiotic Selection: |
Host Type:
bacterial
Marker:
ampicillin Bacterial Selection Condition: 100 ug/mL ampicillin Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended. Comments: Commonly used conditions for ampicillin resistant plasmid clones. |
Protein Expression Results: | None |
Recommended expression in: | Not Applicable |
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Vector Name: | pDNR-Dual |
pDNR-Dual in advanced viewed |
Synonyms: | None | |
Sequencing Primer: | Forward:
M13F
Reverse: Unknown |
|
Description: | Recombinational donor/master vector with 6xHN tag ORF, T7 and M13 primer sites; ampicillin resistance; restriction enzyme cloning (into) and recombinational cloning (from). | |
Comments: | The position of features were detemined for the empty form of the vector, which is described in detail on the BD/Clontech website. Subcloning into the MCS was performed using the infusion reaction strategy and some restriction sites in the MCS may be lost after an insert is added. | |
Size (bp): | 4938 | |
Parent Vector: | None | |
Empty Vector: | None | |
Properties: | Creator, donor (entry), loxP, multiple cloning site, recombinational cloning, with tag/fusion/marker | |
Author Name: |
BD Biosciences Clontech |
|
Publications: | None | |
Vector Map: |
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Sequence: |
Vector Features:
Type | Name | Description | Start Position | End Position |
---|---|---|---|---|
MCS | MCS | restriction enzyme-type multiple cloning site | 45 | 129 |
bacterial origin | ColE1 | ColE1 (pUC-type) origin of replication | 4111 | 4574 |
negative selection marker | SacB | SacB negative selection marker gene (sucrose sensitivity) | 1057 | 2972 |
primer site | M13 primer | M13 primer sequencing site | 4839 | 4855 |
primer site | T7 primer | T7 RNA Pol primer sequencing site | 4865 | 4883 |
recombination site | loxP site | loxP recombination site | 1015 | 1048 |
recombination site | loxP site | loxP recombination site | 9 | 42 |
selectable marker | CmR | chloramphenicol resistance gene ORF (functional only after recombination of insert into vector with promoter) | 986 | 327 |
selectable marker | AmpR | ampicillin resistance gene | 3103 | 3963 |
splice donor site | SD site | splice donor site | 132 | 136 |
tag | HN | 6xHN epitope tag | 141 | 176 |
- Gene
- Pathways
- Protein
- Clone
- Organism
- Genome
- Reagents
Gene
Gene Symbol : | SERPINE1 |
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Symbol Nomenclature : | SERPINE1 |
SYNONYM : | PAI; PAI-1; PAI1; PLANH1 |
Designation : | endothelial plasminogen activator inhibitor|plasminogen activator inhibitor 1|serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1|serpin E1 |
Full Nomenclature : | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
GENEID : | 5054 |
GI : | 61370956 |
GenBank Accession : | AY891655 |
HGNC : | 8583 |
MIM : | 173360 |
Vega : | OTTHUMG00000157107 |
Target GenBank: | BC010860 |
Reference Sequence Alignment
HsCD00002398 ATGCAGATGTCTCCAGCCCTCACCTGCCTAGTCCTGGGCCTGGCCCTTGTCTTTGGTGAA NM_000602.4 ATGCAGATGTCTCCAGCCCTCACCTGCCTAGTCCTGGGCCTGGCCCTTGTCTTTGGTGAA ************************************************************ HsCD00002398 GGGTCTGCTGTGCACCATCCCCCATCCTACGTGGCCCACCTGGCCTCAGACTTCGGGGTG NM_000602.4 GGGTCTGCTGTGCACCATCCCCCATCCTACGTGGCCCACCTGGCCTCAGACTTCGGGGTG ************************************************************ HsCD00002398 AGGGTGTTTCAGCAGGTGGCGCAGGCCTCCAAGGACCGCAACGTGGTTTTCTCACCCTAT NM_000602.4 AGGGTGTTTCAGCAGGTGGCGCAGGCCTCCAAGGACCGCAACGTGGTTTTCTCACCCTAT ************************************************************ HsCD00002398 GGGGTGGCCTCGGTGTTGGCCATGCTCCAGCTGACAACAGGAGGAGAAACCCAGCAGCAG NM_000602.4 GGGGTGGCCTCGGTGTTGGCCATGCTCCAGCTGACAACAGGAGGAGAAACCCAGCAGCAG ************************************************************ HsCD00002398 ATTCAAGCAGCTATGGGATTCAAGATTGATGACAAGGGCATGGCCCCCGCCCTCCGGCAT NM_000602.4 ATTCAAGCAGCTATGGGATTCAAGATTGATGACAAGGGCATGGCCCCCGCCCTCCGGCAT ************************************************************ HsCD00002398 CTGTACAAGGAGCTCATGGGGCCATGGAACAAGGATGAGATCAGCACCACAGACGCGATC NM_000602.4 CTGTACAAGGAGCTCATGGGGCCATGGAACAAGGATGAGATCAGCACCACAGACGCGATC ************************************************************ HsCD00002398 TTCGTCCAGCGGGATCTGAAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAGGCTGTTC NM_000602.4 TTCGTCCAGCGGGATCTGAAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAGGCTGTTC ************************************************************ HsCD00002398 CGGAGCACGGTCAAGCAAGTGGACTTTTCAGAGGTGGAGAGAGCCAGATTCATCATCAAT NM_000602.4 CGGAGCACGGTCAAGCAAGTGGACTTTTCAGAGGTGGAGAGAGCCAGATTCATCATCAAT ************************************************************ HsCD00002398 GACTGGGTGAAGACACACACAAAAGGTATGATCAGCAACTTGCTTGGGAAAGGAGCCGTG NM_000602.4 GACTGGGTGAAGACACACACAAAAGGTATGATCAGCAACTTGCTTGGGAAAGGAGCCGTG ************************************************************ HsCD00002398 GACCAGCTGACACGGCTGGTGCTGGTGAATGCCCTCTACTTCAACGGCCAGTGGAAGACT NM_000602.4 GACCAGCTGACACGGCTGGTGCTGGTGAATGCCCTCTACTTCAACGGCCAGTGGAAGACT ************************************************************ HsCD00002398 CCCTTCCCCGACTCCAGCACCCACCGCCGCCTCTTCCACAAATCAGACGGCAGCACTGTC NM_000602.4 CCCTTCCCCGACTCCAGCACCCACCGCCGCCTCTTCCACAAATCAGACGGCAGCACTGTC ************************************************************ HsCD00002398 TCTGTGCCCATGATGGCTCAGACCAACAAGTTCAACTATACTGAGTTCACCACGCCCGAT NM_000602.4 TCTGTGCCCATGATGGCTCAGACCAACAAGTTCAACTATACTGAGTTCACCACGCCCGAT ************************************************************ HsCD00002398 GGCCATTACTACGACATCCTGGAACTGCCCTACCACGGGGACACCCTCAGCATGTTCATT NM_000602.4 GGCCATTACTACGACATCCTGGAACTGCCCTACCACGGGGACACCCTCAGCATGTTCATT ************************************************************ HsCD00002398 GCTGCCCCTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGAGTGCCCAG NM_000602.4 GCTGCCCCTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGAGTGCCCAG ************************************************************ HsCD00002398 CTCATCAGCCACTGGAAAGGCAACATGACCAGGCTGCCCCGCCTCCTGGTTCTGCCCAAG NM_000602.4 CTCATCAGCCACTGGAAAGGCAACATGACCAGGCTGCCCCGCCTCCTGGTTCTGCCCAAG ************************************************************ HsCD00002398 TTCTCCCTGGAGACTGAAGTCGACCTCAGGAAGCCCCTAGAGAACCTGGGAATGACCGAC NM_000602.4 TTCTCCCTGGAGACTGAAGTCGACCTCAGGAAGCCCCTAGAGAACCTGGGAATGACCGAC ************************************************************ HsCD00002398 ATGTTCAGACAGTTTCAGGCTGACTTCACGAGTCTTTCAGACCAAGAGCCTCTCCACGTC NM_000602.4 ATGTTCAGACAGTTTCAGGCTGACTTCACGAGTCTTTCAGACCAAGAGCCTCTCCACGTC ************************************************************ HsCD00002398 GCGCAGGCGCTGCAGAAAGTGAAGATCGAGGTGAACGAGAGTGGCACGGTGGCCTCCTCA NM_000602.4 GCGCAGGCGCTGCAGAAAGTGAAGATCGAGGTGAACGAGAGTGGCACGGTGGCCTCCTCA ************************************************************ HsCD00002398 TCCACAGCTGTCATAGTCTCAGCCCGCATGGCCCCCGAGGAGATCATCATGGACAGACCC NM_000602.4 TCCACAGCTGTCATAGTCTCAGCCCGCATGGCCCCCGAGGAGATCATCATGGACAGACCC ************************************************************ HsCD00002398 TTCCTCTTTGTGGTCCGGCACAACCCCACAGGAACAGTCCTTTTCATGGGCCAAGTGATG NM_000602.4 TTCCTCTTTGTGGTCCGGCACAACCCCACAGGAACAGTCCTTTTCATGGGCCAAGTGATG ************************************************************ HsCD00002398 GAACCCTTG NM_000602.4 GAACCCTGA ******* .
Pathways
NCI : | Direct p53 effectors |
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NCI : | E2F transcription factor network |
NCI : | HIF-1-alpha transcription factor network |
NCI : | HIF-2-alpha transcription factor network |
NCI : | Regulation of nuclear SMAD2/3 signaling |
NCI : | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
NCI : | p73 transcription factor network |
Panther : | Blood coagulation |
Panther : | Plasminogen activating cascade |
Panther : | p53 pathway |
Reactome : | BMAL1:CLOCK,NPAS2 activates circadian gene expression |
Reactome : | Circadian Clock |
Reactome : | Disease |
Reactome : | Dissolution of Fibrin Clot |
Reactome : | ECM proteoglycans |
Reactome : | Extracellular matrix organization |
Reactome : | Gene Expression |
Reactome : | Generic Transcription Pathway |
Reactome : | Hemostasis |
Reactome : | Loss of Function of SMAD2/3 in Cancer |
Reactome : | Loss of Function of SMAD4 in Cancer |
Reactome : | Loss of Function of TGFBR1 in Cancer |
Reactome : | Loss of Function of TGFBR2 in Cancer |
Reactome : | Platelet activation, signaling and aggregation |
Reactome : | Platelet degranulation |
Reactome : | Response to elevated platelet cytosolic Ca2+ |
Reactome : | SMAD2/3 MH2 Domain Mutants in Cancer |
Reactome : | SMAD2/3 Phosphorylation Motif Mutants in Cancer |
Reactome : | SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
Reactome : | SMAD4 MH2 Domain Mutants in Cancer |
Reactome : | Signal Transduction |
Reactome : | Signaling by TGF-beta Receptor Complex |
Reactome : | Signaling by TGF-beta Receptor Complex in Cancer |
Reactome : | TGFBR1 KD Mutants in Cancer |
Reactome : | TGFBR1 LBD Mutants in Cancer |
Reactome : | TGFBR2 Kinase Domain Mutants in Cancer |
Reactome : | TGFBR2 MSI Frameshift Mutants in Cancer |
Reactome : | Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer |
WikiPathway : | Adipogenesis |
WikiPathway : | Blood Clotting Cascade |
WikiPathway : | Complement and Coagulation Cascades |
WikiPathway : | Folate Metabolism |
WikiPathway : | Selenium Pathway |
WikiPathway : | Senescence and Autophagy |
WikiPathway : | TGF Beta Signaling Pathway |
WikiPathway : | Vitamin B12 Metabolism |
Protein
SMART domain : | SERPIN : SERine Proteinase INhibitors |
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UniProt : | P05121 |
UniProt : | B7Z4S0 |
HPRD : | 01418 |
Clone
Cloning Information : | 16836 |
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HIP Master Clone ID : | 31035 |
Original Clone ID : | FLH016836.01L |
Genome
Chromosome : | 7 |
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Map Location : | 7q22.1 |
Ensembl : | ENSG00000106366 |
Reagents
Labome : | PAI-1-antibody |
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