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TAF6 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  TAF6
Gene Name:  TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
Sequence             
Original Clone ID: FLH269148.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329413

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 2034nts         Open reading frame : 1 to 2034
Reference Sequence Alignment

ATGGCTGAGGAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAG
GTGGTGGCTGAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACG
GATGAGGTCAGCTACCGCATCAAAGAGATCGCACAGGATGCCTTGAAGTTCATGCACATG
GGGAAGCGGCAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTC
GAGCCACTCTATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGG
GGCCGGGAGCTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACC
CCTCTGCCCCGGGTGCCCCTGGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGC
TGCCAGCCAGCTATCCCCGAGAACCCGCCCCCAGCTCCCAAAGAGCAACAGAAGGCTGAA
GCCACAGAACCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGGACCCCTGAAGGGC
AAAGGTCAAGGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGCGCCGCCCTTG
CTGGAGGGGGCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAG
CAGCTCTACTACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCG
GAAGCCCTGCAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGT
ACCTTTATCTCGGAGGGGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATC
TACCTGATGCGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAAAAATAC
GTCCATGAGCTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGA
CCAGATGTGGACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATC
TGCAAGCATTTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACC
AAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTG
GCTGAGCTGGGACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGG
GAGCGGATCCGCAGTGTGCTGGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCA
GACCATGTGCAGAGCCTCCTGCTGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCA
CCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGC
TCCCAGGTGGTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACC
ACTCTGACCATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGC
CCTCGCACCCCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTG
GTGTCTGCACGAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTA
ATGTCATCGTCCTCCAGCGCCCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCC
CCCGGCTCAGGTTCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCC
ATCGTCAAGTTGGTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCTCTGGTCCT
GGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGC
CCCACCTCCCATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGC
AGTGCCCTTTGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACT
CCAAAAGCCAATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 2231
Start on reference sequence 198
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : TAF6
Symbol Nomenclature : TAF6
SYNONYM : MGC:8964; TAF(II)70; TAF(II)80; TAF2E; TAFII-70; TAFII-80; TAFII70; TAFII80; TAFII85
Designation : RNA polymerase II TBP-associated factor subunit E|TATA box binding protein (TBP)-associated factor, RNA polymerase II, E, 70/85kD|transcription initiation factor TFIID 70 kDa subunit|transcription initiation factor TFIID subunit 6
Full Nomenclature : TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
GENEID : 6878
HGNC : 11540
MIM : 602955
Vega : OTTHUMG00000154771
Target GenBank: BC018115

 

Reference Sequence Alignment

  

HsCD00329413        ------------------------------------------------------------
NM_001190415.1      ATGACAAAGCGCCGTCTACAAACAATCACCGCTTGCCTTCAACTTCGGGAAGGGTCTCCG
NM_139315.2         ------------------------------------------------------------
NM_005641.3         ------------------------------------------------------------
                                                                                

HsCD00329413        ---------------------------------------------------ATGGCTGAG
NM_001190415.1      TCTCTCCACCGGGGGCTTCATCCTTCCAGGGAGGAGAAGAGGGACTCCAGAATGGCTGAG
NM_139315.2         ---------------------------------------------------ATGGCTGAG
NM_005641.3         ---------------------------------------------------ATGGCTGAG
                                                                       *********

HsCD00329413        GAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCT
NM_001190415.1      GAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCT
NM_139315.2         GAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCT
NM_005641.3         GAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCT
                    ************************************************************

HsCD00329413        GAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACGGATGAGGTC
NM_001190415.1      GAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACGGATGAGGTC
NM_139315.2         GAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACGGATGAGGTC
NM_005641.3         GAATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACGGATGAGGTC
                    ************************************************************

HsCD00329413        AGCTACCGCATCAAAGAGATCGCACAGGATGCCTTGAAGTTCATGCACATGGGGAAGCGG
NM_001190415.1      AGCTACCGCATCAAAGAGATCGCACAGGATGCCTTGAAGTTCATGCACATGGGGAAGCGG
NM_139315.2         AGCTACCGCATCAAAGAGATCGCACAGGATGCCTTGAAGTTCATGCACATGGGGAAGCGG
NM_005641.3         AGCTACCGCATCAAAGAGATCGCACAGGATGCCTTGAAGTTCATGCACATGGGGAAGCGG
                    ************************************************************

HsCD00329413        CAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTCGAGCCACTC
NM_001190415.1      CAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTCGAGCCACTC
NM_139315.2         CAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTCGAGCCACTC
NM_005641.3         CAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTCGAGCCACTC
                    ************************************************************

HsCD00329413        TATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAG
NM_001190415.1      TATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAG
NM_139315.2         TATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAG
NM_005641.3         TATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAG
                    ************************************************************

HsCD00329413        CTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCC
NM_001190415.1      CTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCC
NM_139315.2         CTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCC
NM_005641.3         CTTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCC
                    ************************************************************

HsCD00329413        CGGGTGCCCCTGGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGCTGCCAGCCA
NM_001190415.1      CGGGTGCCCCTGGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGCTGCCAGCCA
NM_139315.2         CGGGTGCCCCTGGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGCTGCCAGCCA
NM_005641.3         CGGGTGCCCCTGGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGCTGCCAGCCA
                    ************************************************************

HsCD00329413        GCTATCCCCGAGAACCCGCCCCCAGCTCCCAAAGAGCAACAGAAGGCTGAAGCCACAGAA
NM_001190415.1      GCTATCCCCGAGAACCCGCCCCCAGCTCCCAAAGAGCAACAGAAGGCTGAAGCCACAGAA
NM_139315.2         GCTATCCCCGAGAACCCGCCCCCAGCTCCCAAAGAGCAACAGAAGGCTGAAGCCACAGAA
NM_005641.3         GCTATCCCCGAGAACCCGCCCCCAGCTCCCAAAGAGCAACAGAAGGCTGAAGCCACAGAA
                    ************************************************************

HsCD00329413        CCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGGACCCCTGAAGGGCAAAGGTCAA
NM_001190415.1      CCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGGACCCCTGAAGGGCAAAGGTCAA
NM_139315.2         CCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGGACCCCTGAAGGGCAAAGGTCAA
NM_005641.3         CCCCTGAAGTCAGCCAAGCCAGGCCAGGAGGAAGACGGACCCCTGAAGGGCAAAGGTCAA
                    ************************************************************

HsCD00329413        GGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGCGCCGCCCTTGCTGGAGGGG
NM_001190415.1      GGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGCGCCGCCCTTGCTGGAGGGG
NM_139315.2         GGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGCGCCGCCCTTGCTGGAGGGG
NM_005641.3         GGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGCGCCGCCCTTGCTGGAGGGG
                    ************************************************************

HsCD00329413        GCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAGCAGCTCTAC
NM_001190415.1      GCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAGCAGCTCTAC
NM_139315.2         GCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAGCAGCTCTAC
NM_005641.3         GCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAGCAGCTCTAC
                    ************************************************************

HsCD00329413        TACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCGGAAGCCCTG
NM_001190415.1      TACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCGGAAGCCCTG
NM_139315.2         TACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCGGAAGCCCTG
NM_005641.3         TACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCGGAAGCCCTG
                    ************************************************************

HsCD00329413        CAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTTTATC
NM_001190415.1      CAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTTTATC
NM_139315.2         CAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTTTATC
NM_005641.3         CAAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTTTATC
                    ************************************************************

HsCD00329413        TCGGAGGGGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATCTACCTGATG
NM_001190415.1      TCGGAGGGGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATCTACCTGATG
NM_139315.2         TCGGAGGGGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATCTACCTGATG
NM_005641.3         TCGGAGGGGGTCCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATCTACCTGATG
                    ************************************************************

HsCD00329413        CGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAAAAATACGTCCATGAG
NM_001190415.1      CGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAAAAATACGTCCATGAG
NM_139315.2         CGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAAAAATACGTCCATGAG
NM_005641.3         CGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAAAAATACGTCCATGAG
                    ************************************************************

HsCD00329413        CTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGACCAGATGTG
NM_001190415.1      CTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGACCAGATGTG
NM_139315.2         CTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGACCAGATGTG
NM_005641.3         CTGATTCCAGCTGTGATGACCTGCATCGTGAGCAGACAGTTGTGCCTGCGACCAGATGTG
                    ************************************************************

HsCD00329413        GACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATCTGCAAGCAT
NM_001190415.1      GACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATCTGCAAGCAT
NM_139315.2         GACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATCTGCAAGCAT
NM_005641.3         GACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGTGGCCCAGATCTGCAAGCAT
                    ************************************************************

HsCD00329413        TTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACCAAGAGCTGG
NM_001190415.1      TTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACCAAGAGCTGG
NM_139315.2         TTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACCAAGAGCTGG
NM_005641.3         TTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACCAAGAGCTGG
                    ************************************************************

HsCD00329413        GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTG
NM_001190415.1      GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTG
NM_139315.2         GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTG
NM_005641.3         GTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTG
                    ************************************************************

HsCD00329413        GGACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGGGAGCGGATC
NM_001190415.1      GGACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGGGAGCGGATC
NM_139315.2         GGACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGGGAGCGGATC
NM_005641.3         GGACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGGGAGCGGATC
                    ************************************************************

HsCD00329413        CGCAGTGTGCTGGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCAGACCATGTG
NM_001190415.1      CGCAGTGTGCTGGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCAGACCATGTG
NM_139315.2         CGCAGTGTGCTGGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCAGACCATGTG
NM_005641.3         CGCAGTGTGCTGGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCAGACCATGTG
                    ************************************************************

HsCD00329413        CAGAGCCTCCTGCTGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGAC
NM_001190415.1      CAGAGCCTCCTGCTGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGAC
NM_139315.2         CAGAGCCTCCTGCTGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGAC
NM_005641.3         CAGAGCCTCCTGCTGAAACACTGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGAC
                    ************************************************************

HsCD00329413        AATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGCTCCCAGGTG
NM_001190415.1      AATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGCTCCCAGGTG
NM_139315.2         AATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGCTCCCAGGTG
NM_005641.3         AATCAGGACGCCTATCGGGCAGAATTCGGGTCCCTTGGGCCCCTCCTCTGCTCCCAGGTG
                    ************************************************************

HsCD00329413        GTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACC
NM_001190415.1      GTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACC
NM_139315.2         GTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACC
NM_005641.3         GTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACC
                    ************************************************************

HsCD00329413        ATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGCCCTCGCACC
NM_001190415.1      ATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGCCCTCGCACC
NM_139315.2         ATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGCCCTCGCACC
NM_005641.3         ATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGCCCTCGCACC
                    ************************************************************

HsCD00329413        CCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCA
NM_001190415.1      CCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCA
NM_139315.2         CCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCA
NM_005641.3         CCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCA
                    ************************************************************

HsCD00329413        CGAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCG
NM_001190415.1      CGAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCG
NM_139315.2         CGAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCG
NM_005641.3         CGAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCG
                    ************************************************************

HsCD00329413        TCCTCCAGCGCCCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCA
NM_001190415.1      TCCTCCAGCGCCCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCA
NM_139315.2         TCCTCCAGCGCCCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCA
NM_005641.3         TCCTCCAGCGCCCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCA
                    ************************************************************

HsCD00329413        GGTTCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAG
NM_001190415.1      GGTTCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAG
NM_139315.2         GGTTCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAG
NM_005641.3         GGTTCCACCACCACTTCGCCCGTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAG
                    ************************************************************

HsCD00329413        TTGGTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCTCTGGTCCTGGGAGTGTC
NM_001190415.1      TTGGTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCTCTGGTCCTGGGAGTGTC
NM_139315.2         TTGGTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCTCTGGTCCTGGGAGTGTC
NM_005641.3         TTGGTCTCCACCGCCACCACCGCACCCCCCAGCACTGCTCCCTCTGGTCCTGGGAGTGTC
                    ************************************************************

HsCD00329413        CAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGCCCCACCTCC
NM_001190415.1      CAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGCCCCACCTCC
NM_139315.2         CAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGCCCCACCTCC
NM_005641.3         CAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGGCAAAGGAGGCCCCACCTCC
                    ************************************************************

HsCD00329413        CATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGCAGTGCCCTT
NM_001190415.1      CATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGCAGTGCCCTT
NM_139315.2         CATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGCAGTGCCCTT
NM_005641.3         CATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGCAGTGCCCTT
                    ************************************************************

HsCD00329413        TGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCC
NM_001190415.1      TGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCC
NM_139315.2         TGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCC
NM_005641.3         TGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCC
                    ************************************************************

HsCD00329413        AATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTTG
NM_001190415.1      AATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTGA
NM_139315.2         AATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTGA
NM_005641.3         AATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTGA
                    ******************************************* .

Pathways

Panther : General transcription regulation
Panther : Transcription regulation by bZIP transcription factor
Reactome : Disease
Reactome : Gene Expression
Reactome : HIV Infection
Reactome : HIV Life Cycle
Reactome : HIV Transcription Initiation
Reactome : Late Phase of HIV Life Cycle
Reactome : RNA Polymerase II HIV Promoter Escape
Reactome : RNA Polymerase II Pre-transcription Events
Reactome : RNA Polymerase II Promoter Escape
Reactome : RNA Polymerase II Transcription
Reactome : RNA Polymerase II Transcription Initiation
Reactome : RNA Polymerase II Transcription Initiation And Promoter Clearance
Reactome : RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
Reactome : Transcription
Reactome : Transcription of the HIV genome
WikiPathway : Eukaryotic Transcription Initiation

Protein

SMART domain : TAF : TATA box binding protein associated factor
UniProt : P49848
UniProt : B4DT11
HPRD : 11807

Clone

Cloning Information : 269148
HIP Master Clone ID : 153722
Original Clone ID : FLH269148.01L

Organism


TAX_ID : 9606
Species Specific ID: 6878

Genome

Chromosome : 7
Map Location : 7q22.1
Ensembl : ENSG00000106290

Reagents

Labome : TAF6-antibody