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ZNF597 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  ZNF597
Gene Name:  zinc finger protein 597
Sequence             
Original Clone ID: FLH268378.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329488

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1275nts         Open reading frame : 1 to 1275
Reference Sequence Alignment

ATGGCGTCCATGCCCCCGACGCCCGAGGCCCAGGGACCAATACTGTTTGAGGATCTGGCT
GTGTATTTTTCTCAAGAGGAGTGCGTGACTCTGCACCCTGCCCAGAGGTCCCTCAGCAAA
GATGGTACAAAAGAGTCTTTGGAGGATGCGGCTTTGATGGGAGAGGAAGGCAAGCCTGAG
ATTAATCAGCAGTTAAGCCTAGAGTCTATGGAACTTGACGAGCTTGCCTTAGAAAAGTAC
CCCATTGCTGCACCCCTTGTCCCTTACCCAGAAAAATCCTCTGAGGATGGAGTTGGAAAC
CCTGAAGCGAAAATATTAAGTGGAACTCCCACTTACAAGAGAAGGGTCATCAGCCTTTTA
GTTACCATTGAAAACCACACCCCATTAGTAGAACTCTCTGAATATTTAGGAACCAACACA
CTTTCTGAAATTCTTGATTCTCCCTGGGAAGGAGCCAAAAATGTGTACAAATGTCCTGAG
TGTGACCAAAACTTCAGCGATCATTCATACCTAGTTTTGCATCAGAAAATTCATTCAGGA
GAGAAAAAACATAAATGTGGTGACTGTGGAAAGATCTTCAATCATAGAGCCAACCTGAGG
ACACACAGGAGAATCCATACTGGTGAGAAACCTTATAAGTGTGCCAAGTGCAGTGCCAGC
TTTCGCCAGCACTCTCATCTATCCCGACACATGAATAGCCACGTAAAGGAGAAGCCCTAT
ACATGTAGCATATGTGGTAGAGGTTTTATGTGGCTCCCAGGATTGGCACAGCATCAGAAA
AGCCACAGTGCTGAAAACACCTACGAATCTACTAACTGTGATAAACATTTTAATGAGAAA
CCAAATCTTGCTTTGCCTGAGGAAACATTCGTATCAGGCCCCCAGTACCAGCACACTAAG
TGCATGAAGAGCTTCAGGCAGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAG
GACTCTGAACGCTGCAGCGATGATGGGGACAATTTCTTCTCATTCTCAAAATTCAAGCCC
TTACAGTGTCCTGACTGTGACATGACCTTTCCTTGTTTCTCTGAGCTTATTTCCCATCAG
AACATTCATACAGAGGAAAGGCCCCATAAGTGCAAAACATGCGAGGAAAGTTTTGCTTTG
GACTCAGAACTTGCATGCCACCAGAAGAGCCACATGCTAGCGGAACCTTTTAAATGTACC
GTGTGTGGGAAAACTTTCAAGTCGAATTTGCATCTCATTACTCATAAGCGAACTCACATA
AAAAACACCACGTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 1459
Start on reference sequence 185
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : ZNF597
Symbol Nomenclature : ZNF597
Full Nomenclature : zinc finger protein 597
GENEID : 146434
HGNC : 26573
MIM : 614685
Vega : OTTHUMG00000129359
Target GenBank: BC029899

 

Reference Sequence Alignment

  

HsCD00329488      ATGGCGTCCATGCCCCCGACGCCCGAGGCCCAGGGACCAATACTGTTTGAGGATCTGGCT
NM_152457.1       ATGGCGTCCATGCCCCCGACGCCCGAGGCCCAGGGACCAATACTGTTTGAGGATCTGGCT
                  ************************************************************

HsCD00329488      GTGTATTTTTCTCAAGAGGAGTGCGTGACTCTGCACCCTGCCCAGAGGTCCCTCAGCAAA
NM_152457.1       GTGTATTTTTCTCAAGAGGAGTGCGTGACTCTGCACCCTGCCCAGAGGTCCCTCAGCAAA
                  ************************************************************

HsCD00329488      GATGGTACAAAAGAGTCTTTGGAGGATGCGGCTTTGATGGGAGAGGAAGGCAAGCCTGAG
NM_152457.1       GATGGTACAAAAGAGTCTTTGGAGGATGCGGCTTTGATGGGAGAGGAAGGCAAGCCTGAG
                  ************************************************************

HsCD00329488      ATTAATCAGCAGTTAAGCCTAGAGTCTATGGAACTTGACGAGCTTGCCTTAGAAAAGTAC
NM_152457.1       ATTAATCAGCAGTTAAGCCTAGAGTCTATGGAACTTGACGAGCTTGCCTTAGAAAAGTAC
                  ************************************************************

HsCD00329488      CCCATTGCTGCACCCCTTGTCCCTTACCCAGAAAAATCCTCTGAGGATGGAGTTGGAAAC
NM_152457.1       CCCATTGCTGCACCCCTTGTCCCTTACCCAGAAAAATCCTCTGAGGATGGAGTTGGAAAC
                  ************************************************************

HsCD00329488      CCTGAAGCGAAAATATTAAGTGGAACTCCCACTTACAAGAGAAGGGTCATCAGCCTTTTA
NM_152457.1       CCTGAAGCGAAAATATTAAGTGGAACTCCCACTTACAAGAGAAGGGTCATCAGCCTTTTA
                  ************************************************************

HsCD00329488      GTTACCATTGAAAACCACACCCCATTAGTAGAACTCTCTGAATATTTAGGAACCAACACA
NM_152457.1       GTTACCATTGAAAACCACACCCCATTAGTAGAACTCTCTGAATATTTAGGAACCAACACA
                  ************************************************************

HsCD00329488      CTTTCTGAAATTCTTGATTCTCCCTGGGAAGGAGCCAAAAATGTGTACAAATGTCCTGAG
NM_152457.1       CTTTCTGAAATTCTTGATTCTCCCTGGGAAGGAGCCAAAAATGTGTACAAATGTCCTGAG
                  ************************************************************

HsCD00329488      TGTGACCAAAACTTCAGCGATCATTCATACCTAGTTTTGCATCAGAAAATTCATTCAGGA
NM_152457.1       TGTGACCAAAACTTCAGCGATCATTCATACCTAGTTTTGCATCAGAAAATTCATTCAGGA
                  ************************************************************

HsCD00329488      GAGAAAAAACATAAATGTGGTGACTGTGGAAAGATCTTCAATCATAGAGCCAACCTGAGG
NM_152457.1       GAGAAAAAACATAAATGTGGTGACTGTGGAAAGATCTTCAATCATAGAGCCAACCTGAGG
                  ************************************************************

HsCD00329488      ACACACAGGAGAATCCATACTGGTGAGAAACCTTATAAGTGTGCCAAGTGCAGTGCCAGC
NM_152457.1       ACACACAGGAGAATCCATACTGGTGAGAAACCTTATAAGTGTGCCAAGTGCAGTGCCAGC
                  ************************************************************

HsCD00329488      TTTCGCCAGCACTCTCATCTATCCCGACACATGAATAGCCACGTAAAGGAGAAGCCCTAT
NM_152457.1       TTTCGCCAGCACTCTCATCTATCCCGACACATGAATAGCCACGTAAAGGAGAAGCCCTAT
                  ************************************************************

HsCD00329488      ACATGTAGCATATGTGGTAGAGGTTTTATGTGGCTCCCAGGATTGGCACAGCATCAGAAA
NM_152457.1       ACATGTAGCATATGTGGTAGAGGTTTTATGTGGCTCCCAGGATTGGCACAGCATCAGAAA
                  ************************************************************

HsCD00329488      AGCCACAGTGCTGAAAACACCTACGAATCTACTAACTGTGATAAACATTTTAATGAGAAA
NM_152457.1       AGCCACAGTGCTGAAAACACCTACGAATCTACTAACTGTGATAAACATTTTAATGAGAAA
                  ************************************************************

HsCD00329488      CCAAATCTTGCTTTGCCTGAGGAAACATTCGTATCAGGCCCCCAGTACCAGCACACTAAG
NM_152457.1       CCAAATCTTGCTTTGCCTGAGGAAACATTCGTATCAGGCCCCCAGTACCAGCACACTAAG
                  ************************************************************

HsCD00329488      TGCATGAAGAGCTTCAGGCAGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAG
NM_152457.1       TGCATGAAGAGCTTCAGGCAGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAG
                  ************************************************************

HsCD00329488      GACTCTGAACGCTGCAGCGATGATGGGGACAATTTCTTCTCATTCTCAAAATTCAAGCCC
NM_152457.1       GACTCTGAACGCTGCAGCGATGATGGGGACAATTTCTTCTCATTCTCAAAATTCAAGCCC
                  ************************************************************

HsCD00329488      TTACAGTGTCCTGACTGTGACATGACCTTTCCTTGTTTCTCTGAGCTTATTTCCCATCAG
NM_152457.1       TTACAGTGTCCTGACTGTGACATGACCTTTCCTTGTTTCTCTGAGCTTATTTCCCATCAG
                  ************************************************************

HsCD00329488      AACATTCATACAGAGGAAAGGCCCCATAAGTGCAAAACATGCGAGGAAAGTTTTGCTTTG
NM_152457.1       AACATTCATACAGAGGAAAGGCCCCATAAGTGCAAAACATGCGAGGAAAGTTTTGCTTTG
                  ************************************************************

HsCD00329488      GACTCAGAACTTGCATGCCACCAGAAGAGCCACATGCTAGCGGAACCTTTTAAATGTACC
NM_152457.1       GACTCAGAACTTGCATGCCACCAGAAGAGCCACATGCTAGCGGAACCTTTTAAATGTACC
                  ************************************************************

HsCD00329488      GTGTGTGGGAAAACTTTCAAGTCGAATTTGCATCTCATTACTCATAAGCGAACTCACATA
NM_152457.1       GTGTGTGGGAAAACTTTCAAGTCGAATTTGCATCTCATTACTCATAAGCGAACTCACATA
                  ************************************************************

HsCD00329488      AAAAACACCACGTTG
NM_152457.1       AAAAACACCACGTAA
                  *************:.

Pathways

Reactome : Gene Expression
Reactome : Generic Transcription Pathway

Protein

SMART domain : KRAB : krueppel associated box
SMART domain : ZnF_C2H2 : zinc finger
UniProt : Q96LX8
HPRD : 15869

Clone

Cloning Information : 268378
HIP Master Clone ID : 194853
Original Clone ID : FLH268378.01L

Organism


TAX_ID : 9606
Species Specific ID: 146434

Genome

Chromosome : 16
Map Location : 16p13.3
Ensembl : ENSG00000167981

Reagents

Labome : ZNF597-antibody