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TFCP2L1 (H. sapiens ) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  TFCP2L1
Gene Name:  transcription factor CP2-like 1
Sequence             
Original Clone ID: FLH268390.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329500

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1440nts         Open reading frame : 1 to 1440
Reference Sequence Alignment

ATGCTCTTCTGGCACACGCAGCCCGAGCACTACAACCAGCACAACTCCGGCAGCTACCTG
CGTGATGTGCTCGCTCTGCCCATCTTCAAGCAGGAGGAACCCCAGCTGTCCCCCGAGAAC
GAGGCCCGCCTGCCACCCCTGCAATATGTGTTGTGTGCTGCCACGTCCCCAGCCGTGAAG
CTGCATGAAGAGACGCTGACCTACCTCAACCAAGGTCAGTCTTATGAAATCCGACTACTG
GAGAATCGGAAGCTGGGAGACTTTCAAGATCTGAACACAAAATATGTCAAGAGCATCATC
CGTGTGGTCTTCCATGACCGCCGGCTGCAGTATACGGAGCACCAGCAGCTGGAGGGCTGG
CGGTGGAGTCGGCCAGGGGACCGGATCCTGGACATCGATATTCCACTGTCTGTTGGTATC
TTGGACCCCAGGGCCAGCCCGACCCAGCTGAATGCAGTCGAGTTTTTGTGGGACCCTGCG
AAGAGAGCTTCTGCATTCATTCAGGTACACTGCATCAGCACAGAATTCACCCCCAGGAAG
CACGGGGGCGAGAAGGGAGTGCCCTTTCGAGTCCAGATTGACACGTTTAAGCAGAACGAG
AATGGGGAGTACACGGAGCACCTGCACTCAGCCAGCTGCCAGATCAAGGTGTTCAAGCCG
AAGGGAGCCGATCGGAAACAGAAGACTGACCGGGAGAAGATGGAGAAAAGAACTGCCCAA
GAGAAGGAGAAATACCAGCCGTCCTATGAAACCACCATCCTCACAGAGTGCTCTCCATGG
CCCGACGTGGCCTACCAGGTGAACAGCGCCCCGTCCCCAAGCTACAATGGTTCTCCAAAC
AGCTTTGGCCTCGGCGAAGGCAACGCCTCTCCGACCCACCCGGTGGAGGCCCTGCCCGTG
GGCAGTGACCACCTGCTCCCATCAGCTTCGATCCAGGATGCCCAGCAGTGGCTTCACCGC
AACAGGTTCTCGCAGTTCTGCCGGCTCTTTGCCAGCTTCTCAGGTGCTGACTTGCTGAAG
ATGTCCCGAGATGATTTGGTCCAGATCTGTGGTCCCGCAGATGGGATCCGGCTCTTCAAC
GCCATCAAAGGCCGGAATGTGAGGCCAAAGATGACCATTTATGTCTGTCAGGAGCTGGAG
CAGAATCGAGTGCCCCTGCAGCAGAAGCGGGACGGCAGTGGAGACAGCAACCTGTCTGTG
TACCACGCCATCTTCCTGGAAGAGCTGACCACCTTGGAGCTGATTGAGAAGATCGCCAAC
CTGTACAGCATCTCCCCCCAGCACATCCACCGAGTCTACCGGCAGGGCCCCACGGGCATC
CATGTGGTGGTGAGCAACGAGATGGTGCAGAACTTCCAAGATGAATCCTGTTTTGTCCTC
AGCACAATTAAAGCTGAGAGCAATGATGGCTACCACATCATCCTGAAATGTGGACTCTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 1533
Start on reference sequence 94
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : TFCP2L1
Symbol Nomenclature : TFCP2L1
SYNONYM : CRTR1; LBP-9; LBP9
Designation : CP2-related transcriptional repressor 1|CRTR-1|transcription factor CP2-like protein 1|transcription factor LBP-9
Full Nomenclature : transcription factor CP2-like 1
GENEID : 29842
HGNC : 17925
MIM : 609785
Vega : OTTHUMG00000131443
Target GenBank: BC064698

 

Reference Sequence Alignment

  

HsCD00329500      ATGCTCTTCTGGCACACGCAGCCCGAGCACTACAACCAGCACAACTCCGGCAGCTACCTG
NM_014553.2       ATGCTCTTCTGGCACACGCAGCCCGAGCACTACAACCAGCACAACTCCGGCAGCTACCTG
                  ************************************************************

HsCD00329500      CGTGATGTGCTCGCTCTGCCCATCTTCAAGCAGGAGGAACCCCAGCTGTCCCCCGAGAAC
NM_014553.2       CGTGATGTGCTCGCTCTGCCCATCTTCAAGCAGGAGGAACCCCAGCTGTCCCCCGAGAAC
                  ************************************************************

HsCD00329500      GAGGCCCGCCTGCCACCCCTGCAATATGTGTTGTGTGCTGCCACGTCCCCAGCCGTGAAG
NM_014553.2       GAGGCCCGCCTGCCACCCCTGCAATATGTGTTGTGTGCTGCCACGTCCCCAGCCGTGAAG
                  ************************************************************

HsCD00329500      CTGCATGAAGAGACGCTGACCTACCTCAACCAAGGTCAGTCTTATGAAATCCGACTACTG
NM_014553.2       CTGCATGAAGAGACGCTGACCTACCTCAACCAAGGTCAGTCTTATGAAATCCGACTACTG
                  ************************************************************

HsCD00329500      GAGAATCGGAAGCTGGGAGACTTTCAAGATCTGAACACAAAATATGTCAAGAGCATCATC
NM_014553.2       GAGAATCGGAAGCTGGGAGACTTTCAAGATCTGAACACAAAATATGTCAAGAGCATCATC
                  ************************************************************

HsCD00329500      CGTGTGGTCTTCCATGACCGCCGGCTGCAGTATACGGAGCACCAGCAGCTGGAGGGCTGG
NM_014553.2       CGTGTGGTCTTCCATGACCGCCGGCTGCAGTATACGGAGCACCAGCAGCTGGAGGGCTGG
                  ************************************************************

HsCD00329500      CGGTGGAGTCGGCCAGGGGACCGGATCCTGGACATCGATATTCCACTGTCTGTTGGTATC
NM_014553.2       CGGTGGAGTCGGCCAGGGGACCGGATCCTGGACATCGATATTCCACTGTCTGTTGGTATC
                  ************************************************************

HsCD00329500      TTGGACCCCAGGGCCAGCCCGACCCAGCTGAATGCAGTCGAGTTTTTGTGGGACCCTGCG
NM_014553.2       TTGGACCCCAGGGCCAGCCCGACCCAGCTGAATGCAGTCGAGTTTTTGTGGGACCCTGCG
                  ************************************************************

HsCD00329500      AAGAGAGCTTCTGCATTCATTCAGGTACACTGCATCAGCACAGAATTCACCCCCAGGAAG
NM_014553.2       AAGAGAGCTTCTGCATTCATTCAGGTACACTGCATCAGCACAGAATTCACCCCCAGGAAG
                  ************************************************************

HsCD00329500      CACGGGGGCGAGAAGGGAGTGCCCTTTCGAGTCCAGATTGACACGTTTAAGCAGAACGAG
NM_014553.2       CACGGGGGCGAGAAGGGAGTGCCCTTTCGAGTCCAGATTGACACGTTTAAGCAGAACGAG
                  ************************************************************

HsCD00329500      AATGGGGAGTACACGGAGCACCTGCACTCAGCCAGCTGCCAGATCAAGGTGTTCAAGCCG
NM_014553.2       AATGGGGAGTACACGGAGCACCTGCACTCAGCCAGCTGCCAGATCAAGGTGTTCAAGCCG
                  ************************************************************

HsCD00329500      AAGGGAGCCGATCGGAAACAGAAGACTGACCGGGAGAAGATGGAGAAAAGAACTGCCCAA
NM_014553.2       AAGGGAGCCGATCGGAAACAGAAGACTGACCGGGAGAAGATGGAGAAAAGAACTGCCCAA
                  ************************************************************

HsCD00329500      GAGAAGGAGAAATACCAGCCGTCCTATGAAACCACCATCCTCACAGAGTGCTCTCCATGG
NM_014553.2       GAGAAGGAGAAATACCAGCCGTCCTATGAAACCACCATCCTCACAGAGTGCTCTCCATGG
                  ************************************************************

HsCD00329500      CCCGACGTGGCCTACCAGGTGAACAGCGCCCCGTCCCCAAGCTACAATGGTTCTCCAAAC
NM_014553.2       CCCGACGTGGCCTACCAGGTGAACAGCGCCCCGTCCCCAAGCTACAATGGTTCTCCAAAC
                  ************************************************************

HsCD00329500      AGCTTTGGCCTCGGCGAAGGCAACGCCTCTCCGACCCACCCGGTGGAGGCCCTGCCCGTG
NM_014553.2       AGCTTTGGCCTCGGCGAAGGCAACGCCTCTCCGACCCACCCGGTGGAGGCCCTGCCCGTG
                  ************************************************************

HsCD00329500      GGCAGTGACCACCTGCTCCCATCAGCTTCGATCCAGGATGCCCAGCAGTGGCTTCACCGC
NM_014553.2       GGCAGTGACCACCTGCTCCCATCAGCTTCGATCCAGGATGCCCAGCAGTGGCTTCACCGC
                  ************************************************************

HsCD00329500      AACAGGTTCTCGCAGTTCTGCCGGCTCTTTGCCAGCTTCTCAGGTGCTGACTTGCTGAAG
NM_014553.2       AACAGGTTCTCGCAGTTCTGCCGGCTCTTTGCCAGCTTCTCAGGTGCTGACTTGCTGAAG
                  ************************************************************

HsCD00329500      ATGTCCCGAGATGATTTGGTCCAGATCTGTGGTCCCGCAGATGGGATCCGGCTCTTCAAC
NM_014553.2       ATGTCCCGAGATGATTTGGTCCAGATCTGTGGTCCCGCAGATGGGATCCGGCTCTTCAAC
                  ************************************************************

HsCD00329500      GCCATCAAAGGCCGGAATGTGAGGCCAAAGATGACCATTTATGTCTGTCAGGAGCTGGAG
NM_014553.2       GCCATCAAAGGCCGGAATGTGAGGCCAAAGATGACCATTTATGTCTGTCAGGAGCTGGAG
                  ************************************************************

HsCD00329500      CAGAATCGAGTGCCCCTGCAGCAGAAGCGGGACGGCAGTGGAGACAGCAACCTGTCTGTG
NM_014553.2       CAGAATCGAGTGCCCCTGCAGCAGAAGCGGGACGGCAGTGGAGACAGCAACCTGTCTGTG
                  ************************************************************

HsCD00329500      TACCACGCCATCTTCCTGGAAGAGCTGACCACCTTGGAGCTGATTGAGAAGATCGCCAAC
NM_014553.2       TACCACGCCATCTTCCTGGAAGAGCTGACCACCTTGGAGCTGATTGAGAAGATCGCCAAC
                  ************************************************************

HsCD00329500      CTGTACAGCATCTCCCCCCAGCACATCCACCGAGTCTACCGGCAGGGCCCCACGGGCATC
NM_014553.2       CTGTACAGCATCTCCCCCCAGCACATCCACCGAGTCTACCGGCAGGGCCCCACGGGCATC
                  ************************************************************

HsCD00329500      CATGTGGTGGTGAGCAACGAGATGGTGCAGAACTTCCAAGATGAATCCTGTTTTGTCCTC
NM_014553.2       CATGTGGTGGTGAGCAACGAGATGGTGCAGAACTTCCAAGATGAATCCTGTTTTGTCCTC
                  ************************************************************

HsCD00329500      AGCACAATTAAAGCTGAGAGCAATGATGGCTACCACATCATCCTGAAATGTGGACTCTTG
NM_014553.2       AGCACAATTAAAGCTGAGAGCAATGATGGCTACCACATCATCCTGAAATGTGGACTCTGA
                  ********************************************************** .

Protein

UniProt : Q9NZI6
HPRD : 18175

Clone

Cloning Information : 268390
HIP Master Clone ID : 194869
Original Clone ID : FLH268390.01L

Organism


TAX_ID : 9606
Species Specific ID: 29842

Genome

Chromosome : 2
Map Location : 2q14
Ensembl : ENSG00000115112

Reagents

Labome : TFCP2L1-antibody