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LIMS1 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  LIMS1
Gene Name:  LIM and senescent cell antigen-like domains 1
Sequence             
Original Clone ID: FLH268415.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329525

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 978nts         Open reading frame : 1 to 978
Reference Sequence Alignment

ATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCGCCCGCT
GAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGCGCTCAG
TGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTACTGTGAA
CATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCACCATTGGC
CGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGACCTCTGC
CAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGTCGCCCC
TGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGCCATGCT
ATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCATTTCAAC
TGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAGCTATAC
TGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGGCCCATC
GAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTTTGTGCC
AAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCATATTGT
GAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTTATAGAA
GGTGGTGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGTTCTACC
TGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCAGTCTGT
AAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTAGCTGAG
ACCTTAGGAAGGAAATTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 1145
Start on reference sequence 168
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : LIMS1
Symbol Nomenclature : LIMS1
SYNONYM : PINCH; PINCH-1; PINCH1
Designation : LIM and senescent cell antigen-like-containing domain protein 1|particularly interesting new Cys-His protein 1|renal carcinoma antigen NY-REN-48
Full Nomenclature : LIM and senescent cell antigen-like domains 1
GENEID : 3987
HGNC : 6616
MIM : 602567
Vega : OTTHUMG00000130983
Target GenBank: BC005341

 

Reference Sequence Alignment

  

HsCD00329525        ------------------------------------------------------------
NM_001193485.2      ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGA
XM_005263949.1      ------------------------------------------------------------
XM_005263946.1      ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGA
NM_001193483.2      ------------------------------------------------------------
NM_004987.5         ------------------------------------------------------------
XM_005263947.1      ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGA
XM_005263948.1      -----------------------------------------ATGACTGCATTACAGCTTA
NM_001193482.1      ------------------------------------------------------------
NM_001193484.1      -----------------------------------------ATGACTGCATTACAGCTTA
XM_005263950.1      ------------------------------------------------------------
NM_001193488.1      ------------------------------------------------------------
                                                                                

HsCD00329525        ------------------------------------------------------------
NM_001193485.2      GCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAA
XM_005263949.1      --------------------------------------------------------ATGC
XM_005263946.1      GCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAA
NM_001193483.2      ------------------------------------------------------------
NM_004987.5         ------------------------------------------------------------
XM_005263947.1      GCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAA
XM_005263948.1      AAGAGCTTTCACATTCAGGTCTCTACAGGAGAAGACGAGATCGCCCCGATAGTTTGAGAG
NM_001193482.1      ------------------------------------------------------------
NM_001193484.1      AAGAGCTTTCACATTCAGGTCTCTACAGGAGAAGACGAGATCGCCCCGATAGTTTGAGAG
XM_005263950.1      ------------------------------------------------------------
NM_001193488.1      ------------------------------------------------------------
                                                                                

HsCD00329525        ------------------------------------------------------------
NM_001193485.2      CTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAA
XM_005263949.1      TGGGCGTGGCGGCCGGGA----------------------------------TGACCCAC
XM_005263946.1      CTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAA
NM_001193483.2      ------------------------------ATGCTGGGCGTGGCGGCCGGGATGACCCAC
NM_004987.5         ------------------------------------------------------------
XM_005263947.1      CTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAA
XM_005263948.1      TAAATGGGTTACCAGAGG----------------------------------AAGAGCTA
NM_001193482.1      ------------------------------------------------------ATGACA
NM_001193484.1      TAAATGGGTTACCAGAGG----------------------------------AAGAGCTA
XM_005263950.1      ------------------------------------------------------------
NM_001193488.1      ------------------------------------------------------------
                                                                                

HsCD00329525        ------ATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_001193485.2      TTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
XM_005263949.1      AGCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
XM_005263946.1      TTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_001193483.2      AGCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_004987.5         ------ATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
XM_005263947.1      TTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
XM_005263948.1      AGCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_001193482.1      TGCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_001193484.1      AGCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
XM_005263950.1      ------ATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
NM_001193488.1      ------ATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCG
                          ******************************************************

HsCD00329525        CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_001193485.2      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
XM_005263949.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
XM_005263946.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_001193483.2      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_004987.5         CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
XM_005263947.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
XM_005263948.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_001193482.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_001193484.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
XM_005263950.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
NM_001193488.1      CCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGC
                    ************************************************************

HsCD00329525        GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_001193485.2      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
XM_005263949.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
XM_005263946.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_001193483.2      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_004987.5         GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
XM_005263947.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
XM_005263948.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_001193482.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_001193484.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
XM_005263950.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
NM_001193488.1      GCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTAC
                    ************************************************************

HsCD00329525        TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCACC
NM_001193485.2      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
XM_005263949.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
XM_005263946.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
NM_001193483.2      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
NM_004987.5         TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
XM_005263947.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
XM_005263948.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
NM_001193482.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
NM_001193484.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
XM_005263950.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
NM_001193488.1      TGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATC
                    ********************************************************** *

HsCD00329525        ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_001193485.2      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
XM_005263949.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
XM_005263946.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_001193483.2      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_004987.5         ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
XM_005263947.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
XM_005263948.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_001193482.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_001193484.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
XM_005263950.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
NM_001193488.1      ATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGAC
                    ************************************************************

HsCD00329525        CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_001193485.2      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
XM_005263949.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
XM_005263946.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_001193483.2      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_004987.5         CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
XM_005263947.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
XM_005263948.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_001193482.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_001193484.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
XM_005263950.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
NM_001193488.1      CTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGT
                    ************************************************************

HsCD00329525        CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_001193485.2      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
XM_005263949.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
XM_005263946.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_001193483.2      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_004987.5         CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
XM_005263947.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
XM_005263948.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_001193482.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_001193484.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
XM_005263950.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
NM_001193488.1      CGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGC
                    ************************************************************

HsCD00329525        CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_001193485.2      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
XM_005263949.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
XM_005263946.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_001193483.2      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_004987.5         CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
XM_005263947.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
XM_005263948.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_001193482.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_001193484.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
XM_005263950.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
NM_001193488.1      CATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCAT
                    ************************************************************

HsCD00329525        TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_001193485.2      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
XM_005263949.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
XM_005263946.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_001193483.2      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_004987.5         TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
XM_005263947.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
XM_005263948.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_001193482.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_001193484.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
XM_005263950.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
NM_001193488.1      TTCAACTGCGCCAACTGCGGGAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAG
                    ************************************************************

HsCD00329525        CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_001193485.2      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
XM_005263949.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
XM_005263946.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_001193483.2      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_004987.5         CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
XM_005263947.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
XM_005263948.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_001193482.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_001193484.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
XM_005263950.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
NM_001193488.1      CTATACTGCCTCCCATGCCATGATAAAATGGGGGTCCCCATCTGTGGTGCTTGCCGACGG
                    ************************************************************

HsCD00329525        CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_001193485.2      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
XM_005263949.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
XM_005263946.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_001193483.2      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_004987.5         CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
XM_005263947.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
XM_005263948.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_001193482.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_001193484.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
XM_005263950.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
NM_001193488.1      CCCATCGAAGGGCGCGTGGTGAACGCTATGGGCAAGCAGTGGCATGTGGAGCATTTTGTT
                    ************************************************************

HsCD00329525        TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_001193485.2      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
XM_005263949.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
XM_005263946.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_001193483.2      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_004987.5         TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
XM_005263947.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
XM_005263948.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_001193482.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_001193484.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
XM_005263950.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
NM_001193488.1      TGTGCCAAGTGTGAGAAACCCTTTCTTGGACATCGCCATTATGAGAGGAAAGGCCTGGCA
                    ************************************************************

HsCD00329525        TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_001193485.2      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
XM_005263949.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
XM_005263946.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_001193483.2      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_004987.5         TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
XM_005263947.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
XM_005263948.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_001193482.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_001193484.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
XM_005263950.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
NM_001193488.1      TATTGTGAAACTCACTATAACCAGCTATTTGGTGATGTTTGCTTCCACTGCAATCGTGTT
                    ************************************************************

HsCD00329525        ATAGAAGGTGGTGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_001193485.2      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
XM_005263949.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
XM_005263946.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_001193483.2      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_004987.5         ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
XM_005263947.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
XM_005263948.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_001193482.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_001193484.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
XM_005263950.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
NM_001193488.1      ATAGAAGGTGATGTGGTCTCTGCTCTTAATAAGGCCTGGTGCGTGAACTGCTTTGCCTGT
                    **********.*************************************************

HsCD00329525        TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
NM_001193485.2      TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
XM_005263949.1      TCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCA
XM_005263946.1      TCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCA
NM_001193483.2      TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
NM_004987.5         TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
XM_005263947.1      TCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCA
XM_005263948.1      TCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCA
NM_001193482.1      TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
NM_001193484.1      TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
XM_005263950.1      TCTACCTGCAACACTAAATTAACACTCAAGGATAAGTTTGTTGAAATTGACCTAAAGCCA
NM_001193488.1      TCTACCTGCAACACTAAATTAACACTCAAGAATAAGTTTGTGGAGTTTGACATGAAGCCA
                    ******************************.********** **.:*****.*.******

HsCD00329525        GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
NM_001193485.2      GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
XM_005263949.1      GTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGG
XM_005263946.1      GTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGG
NM_001193483.2      GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
NM_004987.5         GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
XM_005263947.1      GTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGG
XM_005263948.1      GTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGG
NM_001193482.1      GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
NM_001193484.1      GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
XM_005263950.1      GTCTGCAAACACTGTTATGAGAAAATGCCAGAAGAATTTAAGAGGCGACTTGCCAAACGG
NM_001193488.1      GTCTGTAAGAAGTGCTATGAGAAATTTCCATTGGAGCTGAAGAAAAGACTTAAGAAACTA
                    ***** **..* ** *********:* *** :.**. * ****...*****.. **** .

HsCD00329525        GCTGAGACCTTAGGAAGGAAATTG---------------------------------
NM_001193485.2      GCTGAGACCTTAGGAAGGAAATAA---------------------------------
XM_005263949.1      GAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
XM_005263946.1      GAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
NM_001193483.2      GCTGAGACCTTAGGAAGGAAATAA---------------------------------
NM_004987.5         GCTGAGACCTTAGGAAGGAAATAA---------------------------------
XM_005263947.1      GAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
XM_005263948.1      GAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
NM_001193482.1      GCTGAGACCTTAGGAAGGAAATAA---------------------------------
NM_001193484.1      GCTGAGACCTTAGGAAGGAAATAA---------------------------------
XM_005263950.1      GAGAGAGAAGCAAAGGATAAGGACAAGCAGAAAAAGAAAAAGCCAGTCTGTTTGTAA
NM_001193488.1      GCTGAGACCTTAGGAAGGAAATAA---------------------------------
                    *. ......  *..... **. :                                  

Pathways

NCI : Integrin-linked kinase signaling
Panther : Integrin signalling pathway
Reactome : Cell junction organization
Reactome : Cell-Cell communication
Reactome : Cell-extracellular matrix interactions
Reactome : Regulation of cytoskeletal remodeling and cell spreading by IPP complex components

Protein

SMART domain : LIM : Zinc-binding domain present in Lin-11, Isl-1, Mec-3.
UniProt : B7Z7R3
UniProt : B7Z483
UniProt : B7Z907
UniProt : P48059
HPRD : 03978

Clone

Cloning Information : 268415
HIP Master Clone ID : 194919
Original Clone ID : FLH268415.01L

Organism


TAX_ID : 9606
Species Specific ID: 3987

Genome

Chromosome : 2
Map Location : 2q12.3
Ensembl : ENSG00000169756

Reagents

Labome : PINCH-antibody