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C1D (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  C1D
Gene Name:  C1D nuclear receptor corepressor
Sequence             
Original Clone ID: FLH268431.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329539

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 426nts         Open reading frame : 1 to 426
Reference Sequence Alignment

ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
AGTTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 475
Start on reference sequence 50
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : C1D
Symbol Nomenclature : C1D
SYNONYM : LRP1; SUN-CoR; SUNCOR; hC1D
Designation : C1D DNA-binding protein|C1D nuclear receptor co-repressor|nuclear DNA-binding protein|nuclear nucleic acid-binding protein C1D|small unique nuclear receptor co-repressor|small unique nuclear receptor corepressor
Full Nomenclature : C1D nuclear receptor corepressor
GENEID : 10438
HGNC : 29911
MIM : 606997
Target GenBank: BC009589

 

Reference Sequence Alignment

  

HsCD00329539        ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
NM_006333.3         ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
NM_001190263.1      ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
NM_001190265.1      ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
NM_173177.2         ATGGCAGGTGAAGAAATTAATGAAGACTATCCAGTAGAAATTCACGAGTATTTGTCAGCG
                    ************************************************************

HsCD00329539        TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
NM_006333.3         TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
NM_001190263.1      TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
NM_001190265.1      TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
NM_173177.2         TTTGAGAATTCCATTGGTGCTGTGGATGAGATGCTGAAGACCATGATGTCTGTTTCTAGA
                    ************************************************************

HsCD00329539        AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
NM_006333.3         AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
NM_001190263.1      AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
NM_001190265.1      AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
NM_173177.2         AATGAGTTGTTGCAGAAGTTGGATCCACTTGAACAAGCAAAAGTGGATTTGGTTTCTGCA
                    ************************************************************

HsCD00329539        TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
NM_006333.3         TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
NM_001190263.1      TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
NM_001190265.1      TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
NM_173177.2         TACACATTAAATTCAATGTTTTGGGTTTATTTGGCAACCCAAGGAGTTAATCCTAAGGAA
                    ************************************************************

HsCD00329539        CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
NM_006333.3         CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
NM_001190263.1      CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
NM_001190265.1      CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
NM_173177.2         CATCCAGTAAAACAGGAATTGGAAAGAATCAGAGTATATATGAACAGAGTCAAGGAAATA
                    ************************************************************

HsCD00329539        ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
NM_006333.3         ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
NM_001190263.1      ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
NM_001190265.1      ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
NM_173177.2         ACAGACAAGAAAAAGGCTGGCAAGCTGGACAGAGGTGCAGCTTCAAGATTTGTAAAAAAT
                    ************************************************************

HsCD00329539        GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
NM_006333.3         GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
NM_001190263.1      GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
NM_001190265.1      GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
NM_173177.2         GCCCTCTGGGAACCAAAATCGAAAAATGCATCAAAAGTTGCCAATAAAGGAAAAAGTAAA
                    ************************************************************

HsCD00329539        AGTTTG
NM_006333.3         AGTTAA
NM_001190263.1      AGTTAA
NM_001190265.1      AGTTAA
NM_173177.2         AGTTAA
                    ****:.

Protein

UniProt : Q13901
HPRD : 07382

Clone

Cloning Information : 268431
HIP Master Clone ID : 193438
Original Clone ID : FLH268431.01L

Organism


TAX_ID : 9606
Species Specific ID: 10438

Genome

Chromosome : 2
Map Location : 2p13-p12

Reagents

Labome : C1D-antibody