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ERCC3 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  ERCC3
Gene Name:  excision repair cross-complementing rodent repair deficiency, complementation group 3
Sequence             
Original Clone ID: FLH269080.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / Yes
Publications: None
Authors:
HsCD00329578

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 2349nts         Open reading frame : 1 to 2349
Reference Sequence Alignment

ATGGGCAAAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAG
GATGAAGAGGATGATGAAGAGGACGCCCCGGGGAACGACCCTCAGGAAGCGGTTCCCTCG
GCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGAC
TACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCC
GATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTG
GTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCC
TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTC
AGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACT
GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGC
CACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGA
AACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
TCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
GAAGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTC
CAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGAT
TCTGTCAACCCTGATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAG
GAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTT
CCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGC
TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATG
TGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCC
ATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCC
TGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCC
CACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTA
AATTTTCTGATTGGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGC
TACATCGCCAAAGTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGG
GAATACGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAA
TTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTC
TTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATC
TACGGACCTACGTCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCC
AAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCA
AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTA
GGGCGGGTGCTTCGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTAC
TCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTG
GTAGATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
TTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACT
GACCTGGATGCCGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCA
TCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAG
TACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTT
AGGAAATTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 2422
Start on reference sequence 74
Mutations:
None
Discrepancy:
t1566c
                                

5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : ERCC3
Symbol Nomenclature : ERCC3
SYNONYM : BTF2; GTF2H; RAD25; TFIIH; XPB
Designation : BTF2 p89|DNA excision repair protein ERCC-3|DNA repair protein complementing XP-B cells|TFIIH 89 kDa subunit|TFIIH basal transcription factor complex 89 kDa subunit|TFIIH basal transcription factor complex helicase XPB subunit|TFIIH p89|basic transcription factor 2 89 kDa subunit|xeroderma pigmentosum group B-complementing protein|xeroderma pigmentosum, complementation group B
Full Nomenclature : excision repair cross-complementing rodent repair deficiency, complementation group 3
GENEID : 2071
HGNC : 3435
MIM : 133510
Vega : OTTHUMG00000131530
Target GenBank: BC008820

 

Reference Sequence Alignment

  

HsCD00329578        ATGGGCAAAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAG
XM_005263618.1      ------------------------------------------------------------
NM_000122.1         ATGGGCAAAAGAGACCGAGCGGACCGCGACAAGAAGAAATCCAGGAAGCGGCACTATGAG
                                                                                

HsCD00329578        GATGAAGAGGATGATGAAGAGGACGCCCCGGGGAACGACCCTCAGGAAGCGGTTCCCTCG
XM_005263618.1      ------------------------------------------------------------
NM_000122.1         GATGAAGAGGATGATGAAGAGGACGCCCCGGGGAACGACCCTCAGGAAGCGGTTCCCTCG
                                                                                

HsCD00329578        GCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGAC
XM_005263618.1      ------------------------------------------------------------
NM_000122.1         GCGGCGGGGAAGCAGGTGGATGAGTCAGGCACCAAAGTGGATGAATATGGAGCCAAGGAC
                                                                                

HsCD00329578        TACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCC
XM_005263618.1      ------------ATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCC
NM_000122.1         TACAGGCTGCAAATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTCTGGGTGGCTCCC
                                ************************************************

HsCD00329578        GATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTG
XM_005263618.1      GATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTG
NM_000122.1         GATGGCCATATCTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCTTG
                    ************************************************************

HsCD00329578        GTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCC
XM_005263618.1      GTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCC
NM_000122.1         GTGGCTATTGCAGAGCCAGTGTGCCGACCAACCCATGTGCATGAGTACAAACTAACTGCC
                    ************************************************************

HsCD00329578        TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTC
XM_005263618.1      TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTC
NM_000122.1         TACTCCTTGTATGCAGCTGTCAGCGTTGGGCTGCAAACCAGTGACATCACCGAGTACCTC
                    ************************************************************

HsCD00329578        AGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACT
XM_005263618.1      AGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACT
NM_000122.1         AGGAAGCTCAGCAAGACTGGAGTCCCTGATGGAATTATGCAGTTTATTAAGTTGTGTACT
                    ************************************************************

HsCD00329578        GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGC
XM_005263618.1      GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGC
NM_000122.1         GTCAGCTATGGAAAAGTCAAGCTGGTCTTGAAGCACAACAGATACTTCGTTGAAAGTTGC
                    ************************************************************

HsCD00329578        CACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGA
XM_005263618.1      CACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGA
NM_000122.1         CACCCTGATGTAATCCAGCATCTTCTCCAGGACCCCGTGATCCGAGAATGCCGCTTAAGA
                    ************************************************************

HsCD00329578        AACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
XM_005263618.1      AACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
NM_000122.1         AACTCTGAAGGGGAGGCCACTGAGCTCATCACAGAGACTTTCACAAGCAAATCTGCCATT
                    ************************************************************

HsCD00329578        TCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
XM_005263618.1      TCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
NM_000122.1         TCTAAGACTGCTGAAAGCAGTGGTGGGCCCTCCACTTCCCGAGTGACAGATCCACAGGGT
                    ************************************************************

HsCD00329578        AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
XM_005263618.1      AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
NM_000122.1         AAATCTGACATCCCCATGGACCTGTTTGACTTCTATGAGCAAATGGACAAGGATGAAGAA
                    ************************************************************

HsCD00329578        GAAGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTC
XM_005263618.1      GAAGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTC
NM_000122.1         GAAGAAGAAGAGACACAGACAGTGTCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTC
                    ************************************************************

HsCD00329578        CAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGAT
XM_005263618.1      CAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGAT
NM_000122.1         CAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATATGACTTCCGGAATGAT
                    ************************************************************

HsCD00329578        TCTGTCAACCCTGATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAG
XM_005263618.1      TCTGTCAACCCTGATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAG
NM_000122.1         TCTGTCAACCCTGATATCAACATTGACCTAAAGCCCACAGCTGTCCTCAGACCCTATCAG
                    ************************************************************

HsCD00329578        GAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTT
XM_005263618.1      GAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTT
NM_000122.1         GAGAAGAGCTTGCGAAAGATGTTTGGAAACGGGCGTGCACGTTCGGGGGTCATTGTTCTT
                    ************************************************************

HsCD00329578        CCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGC
XM_005263618.1      CCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGC
NM_000122.1         CCCTGCGGTGCTGGAAAGTCCCTGGTTGGTGTGACTGCTGCATGCACTGTCAGAAAACGC
                    ************************************************************

HsCD00329578        TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATG
XM_005263618.1      TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATG
NM_000122.1         TGTCTGGTGCTGGGCAACTCAGCTGTTTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATG
                    ************************************************************

HsCD00329578        TGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCC
XM_005263618.1      TGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCC
NM_000122.1         TGGTCCACCATTGACGACAGCCAGATCTGCCGGTTCACCTCCGATGCCAAGGACAAGCCC
                    ************************************************************

HsCD00329578        ATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCC
XM_005263618.1      ATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCC
NM_000122.1         ATCGGCTGCTCCGTTGCCATTAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCC
                    ************************************************************

HsCD00329578        TGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
XM_005263618.1      TGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
NM_000122.1         TGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGTGGGGCCTCATGATCCTG
                    ************************************************************

HsCD00329578        GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCC
XM_005263618.1      GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCC
NM_000122.1         GATGAAGTGCACACCATACCAGCCAAGATGTTCCGAAGGGTGCTCACCATCGTGCAGGCC
                    ************************************************************

HsCD00329578        CACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTA
XM_005263618.1      CACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTA
NM_000122.1         CACTGTAAGCTGGGTTTGACTGCGACCCTCGTCCGCGAAGATGACAAAATTGTGGATTTA
                    ************************************************************

HsCD00329578        AATTTTCTGATTGGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGC
XM_005263618.1      AATTTTCTGATTGGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGC
NM_000122.1         AATTTTCTGATTGGGCCTAAGCTCTACGAAGCCAACTGGATGGAGCTGCAGAATAATGGC
                    ************************************************************

HsCD00329578        TACATCGCCAAAGTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGG
XM_005263618.1      TACATCGCCAAAGTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGG
NM_000122.1         TACATCGCCAAAGTCCAGTGTGCTGAGGTCTGGTGCCCTATGTCTCCTGAATTTTACCGG
                    ************************************************************

HsCD00329578        GAATACGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAA
XM_005263618.1      GAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAA
NM_000122.1         GAATATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAA
                    ***** ******************************************************

HsCD00329578        TTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTC
XM_005263618.1      TTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTC
NM_000122.1         TTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTC
                    ************************************************************

HsCD00329578        TTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATC
XM_005263618.1      TTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATC
NM_000122.1         TTTGCTGACAATGTGTTTGCCCTAAAGGAATATGCCATTCGACTGAACAAACCCTATATC
                    ************************************************************

HsCD00329578        TACGGACCTACGTCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCC
XM_005263618.1      TACGGACCTACGTCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCC
NM_000122.1         TACGGACCTACGTCTCAGGGGGAAAGGATGCAAATTCTCCAGAATTTCAAGCACAACCCC
                    ************************************************************

HsCD00329578        AAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCA
XM_005263618.1      AAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCA
NM_000122.1         AAAATTAACACCATCTTCATATCCAAGGTAGGTGACACTTCGTTTGATCTGCCGGAAGCA
                    ************************************************************

HsCD00329578        AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTA
XM_005263618.1      AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTA
NM_000122.1         AATGTCCTCATTCAGATCTCATCCCATGGTGGCTCCAGGCGTCAGGAAGCCCAAAGGCTA
                    ************************************************************

HsCD00329578        GGGCGGGTGCTTCGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTAC
XM_005263618.1      GGGCGGGTGCTTCGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTAC
NM_000122.1         GGGCGGGTGCTTCGAGCTAAAAAAGGGATGGTTGCAGAAGAGTACAATGCCTTTTTCTAC
                    ************************************************************

HsCD00329578        TCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTG
XM_005263618.1      TCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTG
NM_000122.1         TCACTGGTATCCCAGGACACACAGGAAATGGCTTACTCAACCAAGCGGCAGAGATTCTTG
                    ************************************************************

HsCD00329578        GTAGATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
XM_005263618.1      GTAGATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
NM_000122.1         GTAGATCAAGGTTATAGCTTCAAGGTGATCACGAAACTCGCTGGCATGGAGGAGGAAGAC
                    ************************************************************

HsCD00329578        TTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACT
XM_005263618.1      TTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACT
NM_000122.1         TTGGCGTTTTCGACAAAAGAAGAGCAACAGCAGCTCTTACAGAAAGTCCTGGCAGCCACT
                    ************************************************************

HsCD00329578        GACCTGGATGCCGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCA
XM_005263618.1      GACCTGGATGCCGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCA
NM_000122.1         GACCTGGATGCCGAGGAGGAGGTGGTGGCTGGGGAATTTGGCTCCAGATCCAGCCAGGCA
                    ************************************************************

HsCD00329578        TCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAG
XM_005263618.1      TCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAG
NM_000122.1         TCTCGGCGCTTTGGCACCATGAGTTCTATGTCTGGGGCCGACGACACTGTGTACATGGAG
                    ************************************************************

HsCD00329578        TACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTT
XM_005263618.1      TACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTT
NM_000122.1         TACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGTACACCCGCTCTTCAAGCGCTTT
                    ************************************************************

HsCD00329578        AGGAAATTG
XM_005263618.1      AGGAAATGA
NM_000122.1         AGGAAATGA
                    ******* .

Pathways

Reactome : DNA Repair
Reactome : Disease
Reactome : Dual incision reaction in GG-NER
Reactome : Dual incision reaction in TC-NER
Reactome : Epigenetic regulation of gene expression
Reactome : Formation of HIV elongation complex in the absence of HIV Tat
Reactome : Formation of HIV-1 elongation complex containing HIV-1 Tat
Reactome : Formation of RNA Pol II elongation complex
Reactome : Formation of incision complex in GG-NER
Reactome : Formation of the Early Elongation Complex
Reactome : Formation of the HIV-1 Early Elongation Complex
Reactome : Formation of transcription-coupled NER (TC-NER) repair complex
Reactome : Gene Expression
Reactome : Global Genomic NER (GG-NER)
Reactome : HIV Infection
Reactome : HIV Life Cycle
Reactome : HIV Transcription Elongation
Reactome : HIV Transcription Initiation
Reactome : Late Phase of HIV Life Cycle
Reactome : Negative epigenetic regulation of rRNA expression
Reactome : NoRC negatively regulates rRNA expression
Reactome : Nucleotide Excision Repair
Reactome : RNA Pol II CTD phosphorylation and interaction with CE
Reactome : RNA Polymerase I Chain Elongation
Reactome : RNA Polymerase I Promoter Clearance
Reactome : RNA Polymerase I Promoter Escape
Reactome : RNA Polymerase I Transcription
Reactome : RNA Polymerase I Transcription Initiation
Reactome : RNA Polymerase I Transcription Termination
Reactome : RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription
Reactome : RNA Polymerase II HIV Promoter Escape
Reactome : RNA Polymerase II Pre-transcription Events
Reactome : RNA Polymerase II Promoter Escape
Reactome : RNA Polymerase II Transcription
Reactome : RNA Polymerase II Transcription Elongation
Reactome : RNA Polymerase II Transcription Initiation
Reactome : RNA Polymerase II Transcription Initiation And Promoter Clearance
Reactome : RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
Reactome : Tat-mediated elongation of the HIV-1 transcript
Reactome : Transcription
Reactome : Transcription of the HIV genome
Reactome : Transcription-coupled NER (TC-NER)
Reactome : mRNA Capping
WikiPathway : Eukaryotic Transcription Initiation

Clone

Cloning Information : 269080
HIP Master Clone ID : 137726
Original Clone ID : FLH269080.01L

Organism


TAX_ID : 9606
Species Specific ID: 2071

Genome

Chromosome : 2
Map Location : 2q21
Ensembl : ENSG00000163161

Reagents

Labome : ERCC3-antibody