Gene: |
Gene Symbol:
CERS4 Gene Name:  ceramide synthase 4 Sequence |
---|---|
Original Clone ID: | FLH269106.01L |
Keyword: | None |
Species: | Homo sapiens |
Type: | cDNA |
Vector Name: | pLenti6.2/V5-DEST Format: FUSION |
Source: | HIP |
Description: | None |
Comments: | None |
Mutation/ Discrepancy : |
No / No |
Publications: | None |
Authors: |
HsCD00329604 Price: Login for Pricing AVAILABLE No restriction Special MTA: None |
Insert sequence: 1185nts
Open reading frame : 1 to 1185 Reference Sequence Alignment ATGCTGTCCAGTTTCAACGAGTGGTTTTGGCAGGACAGGTTCTGGTTACCACCCAATGTC
ACGTGGACAGAGCTAGAAGACCGGGATGGCCGTGTCTACCCCCACCCCCAGGACTTGTTG
GCAGCCCTGCCCCTGGCGCTGGTCCTCCTGGCCATGCGCCTTGCCTTTGAGAGATTCATT
GGCCTGCCCCTGAGCCGGTGGCTGGGTGTGAGGGATCAGACCAGGAGGCAAGTGAAGCCC
AACGCCACGCTGGAGAAACACTTCCTCACGGAAGGGCACAGGCCCAAGGAGCCCCAGCTG
TCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAGCAGACCCAGCGATGGTTCCGGAGA
CGCCGGAACCAGGATCGACCCCAGCTGACCAAGAAGTTCTGTGAGGCCAGCTGGAGGTTT
CTCTTCTACCTGTCCTCCTTCGTGGGCGGCCTCTCGGTCCTGTACCACGAGTCATGGCTG
TGGGCACCAGTAATGTGCTGGGACAGGTACCCAAACCAGACTCTGAAGCCATCCCTGTAC
TGGTGGTACCTCTTGGAGCTGGGTTTCTACCTCTCACTGCTAATCAGGCTGCCCTTTGAT
GTCAAGCGCAAGGATTTCAAGGAGCAGGTGATACACCACTTCGTGGCGGTCATCCTGATG
ACCTTCTCCTACAGTGCCAACCTGCTGCGCATTGGCTCTCTGGTGCTGCTGTTACATGAT
TCCTCTGACTACCTGCTGGAGGCCTGTAAGATGGTCAACTACATGCAGTATCAGCAAGTG
TGCGACGCTCTCTTCCTCATCTTCTCCTTTGTCTTCTTCTACACCCGACTGGTCCTCTTT
CCCACCCAGATCCTCTACACCACATACTACGAGTCCATCAGCAACAGGGGCCCCTTCTTC
GGCTACTACTTCTTCAACGGGCTTCTGATGTTGCTGCAGCTGCTGCACGTGTTCTGGTCT
TGCCTCATTCTGCGCATGCTCTATAGCTTCATGAAGAAGGGCCAGATGGAGAAGGACATT
CGTAGTGATGTAGAAGAATCAGACTCCAGTGAGGAGGTGGCGGCGGCCCAGGAACCTCTG
CAGCTAAAGAACGGGGCAGCTGGAGGGCCCAGGCCAGCCCCCACTGATGGCCCTCAGAGC
CGGGTGGCCGGGCGTCTGACCAACAGGCACACAACAGCCACATTG
|
Coding Sequence Details | |
---|---|
Insert Sequence Verified?: N | Verification Method: Insert was fully sequenced in parent vector |
Reference Sequence Annotations: End on reference sequence 1317 Start on reference sequence 133 |
|
Mutations: None |
Discrepancy: None |
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi) |
|
3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC |
Distributed in bacterial strain : | DH5-alpha T1 phage resistant |
---|---|
Antibiotic Selection: |
Host Type:
bacterial
Marker:
ampicillin Host Type: mammalian Marker: blasticidin Bacterial Selection Condition: 100 ug/mL ampicillin Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended. Comments: Commonly used conditions for ampicillin resistant plasmid clones. |
Protein Expression Results: | None |
Recommended expression in: | Not Applicable |
  Powered by LabGenius |
||
Vector Name: | pLenti6.2/V5-DEST |
pLenti6.2V5-DEST in advanced viewed |
Synonyms: | pLenti6.2/V5-DEST | |
Sequencing Primer: | Forward:
CMV forward
Reverse: V5 reverse |
|
Description: | Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning. | |
Comments: | None | |
Size (bp): | 8813 | |
Parent Vector: | None | |
Empty Vector: | None | |
Properties: | Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker | |
Author Name: |
Invitrogen |
|
Publications: | None | |
Vector Map: |
![]() ![]() |
|
Sequence: |
Vector Features:
Type | Name | Description | Start Position | End Position |
---|---|---|---|---|
bacterial origin | pUC ori | pUC origin of replication | 7733 | 8406 |
death cassette | ccdB | ccdB death cassette (removed when insert is present) | 3767 | 3976 |
packaging signal | HIV-1 psi | HIV-1 psi packaging signal | 521 | 565 |
poly-A signal | SV40 | SV40 polyadenylation signal | 5639 | 5770 |
promoter | RSV | RSV/5' LTR hybrid promoter | 1 | 410 |
promoter | CMV | CMV promoter driving gene of interest | 1809 | 2392 |
promoter | PGK | PGK promoter to drive selection marker in mammalian cells | 4266 | 4771 |
recombination site | attR2 | attR2 recombinational cloning site | 4127 | 4142 |
recombination site | attR1 | attR1 recombinational cloning site | 2440 | 2456 |
response element | HIV-1 RRE | HIV-1 Rev response element (RRE) | 1075 | 1308 |
selectable marker | AmpR | Ampicillin resistance gene for selection in bacteria | 6728 | 7588 |
selectable marker | BlastR | Blasticidin resistance gene in mammalian cells | 4849 | 5249 |
selectable marker | CmR | chloramphenicol resistance marker (removed in plasmids with insert) | 2673 | 3329 |
splice acceptor site | 3' splice acceptor | two 3' splice acceptors at 1656 and 1684 | 1656 | 1656 |
splice donor site | 5' splice donor | 5' splice donor | 520 | 520 |
tag | V5 | C-terminal V5 epitope tag | 4197 | 4238 |
- Gene
- Pathways
- Protein
- Clone
- Organism
- Genome
- Reagents
Gene
Gene Symbol : | CERS4 |
---|---|
Symbol Nomenclature : | CERS4 |
SYNONYM : | LASS4; Trh1 |
Designation : | LAG1 homolog, ceramide synthase 4|LAG1 longevity assurance homolog 4 |
Full Nomenclature : | ceramide synthase 4 |
GENEID : | 79603 |
HGNC : | 23747 |
MIM : | 615334 |
Vega : | OTTHUMG00000172570 |
Target GenBank: | BC009828 |
Reference Sequence Alignment
HsCD00329604 ATGCTGTCCAGTTTCAACGAGTGGTTTTGGCAGGACAGGTTCTGGTTACCACCCAATGTC NM_024552.2 ATGCTGTCCAGTTTCAACGAGTGGTTTTGGCAGGACAGGTTCTGGTTACCACCCAATGTC ************************************************************ HsCD00329604 ACGTGGACAGAGCTAGAAGACCGGGATGGCCGTGTCTACCCCCACCCCCAGGACTTGTTG NM_024552.2 ACGTGGACAGAGCTAGAAGACCGGGATGGCCGTGTCTACCCCCACCCCCAGGACTTGTTG ************************************************************ HsCD00329604 GCAGCCCTGCCCCTGGCGCTGGTCCTCCTGGCCATGCGCCTTGCCTTTGAGAGATTCATT NM_024552.2 GCAGCCCTGCCCCTGGCGCTGGTCCTCCTGGCCATGCGCCTTGCCTTTGAGAGATTCATT ************************************************************ HsCD00329604 GGCCTGCCCCTGAGCCGGTGGCTGGGTGTGAGGGATCAGACCAGGAGGCAAGTGAAGCCC NM_024552.2 GGCCTGCCCCTGAGCCGGTGGCTGGGTGTGAGGGATCAGACCAGGAGGCAAGTGAAGCCC ************************************************************ HsCD00329604 AACGCCACGCTGGAGAAACACTTCCTCACGGAAGGGCACAGGCCCAAGGAGCCCCAGCTG NM_024552.2 AACGCCACGCTGGAGAAACACTTCCTCACGGAAGGGCACAGGCCCAAGGAGCCCCAGCTG ************************************************************ HsCD00329604 TCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAGCAGACCCAGCGATGGTTCCGGAGA NM_024552.2 TCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAGCAGACCCAGCGATGGTTCCGGAGA ************************************************************ HsCD00329604 CGCCGGAACCAGGATCGACCCCAGCTGACCAAGAAGTTCTGTGAGGCCAGCTGGAGGTTT NM_024552.2 CGCCGGAACCAGGATCGACCCCAGCTGACCAAGAAGTTCTGTGAGGCCAGCTGGAGGTTT ************************************************************ HsCD00329604 CTCTTCTACCTGTCCTCCTTCGTGGGCGGCCTCTCGGTCCTGTACCACGAGTCATGGCTG NM_024552.2 CTCTTCTACCTGTCCTCCTTCGTGGGCGGCCTCTCGGTCCTGTACCACGAGTCATGGCTG ************************************************************ HsCD00329604 TGGGCACCAGTAATGTGCTGGGACAGGTACCCAAACCAGACTCTGAAGCCATCCCTGTAC NM_024552.2 TGGGCACCAGTAATGTGCTGGGACAGGTACCCAAACCAGACTCTGAAGCCATCCCTGTAC ************************************************************ HsCD00329604 TGGTGGTACCTCTTGGAGCTGGGTTTCTACCTCTCACTGCTAATCAGGCTGCCCTTTGAT NM_024552.2 TGGTGGTACCTCTTGGAGCTGGGTTTCTACCTCTCACTGCTAATCAGGCTGCCCTTTGAT ************************************************************ HsCD00329604 GTCAAGCGCAAGGATTTCAAGGAGCAGGTGATACACCACTTCGTGGCGGTCATCCTGATG NM_024552.2 GTCAAGCGCAAGGATTTCAAGGAGCAGGTGATACACCACTTCGTGGCGGTCATCCTGATG ************************************************************ HsCD00329604 ACCTTCTCCTACAGTGCCAACCTGCTGCGCATTGGCTCTCTGGTGCTGCTGTTACATGAT NM_024552.2 ACCTTCTCCTACAGTGCCAACCTGCTGCGCATTGGCTCTCTGGTGCTGCTGTTACACGAT ******************************************************** *** HsCD00329604 TCCTCTGACTACCTGCTGGAGGCCTGTAAGATGGTCAACTACATGCAGTATCAGCAAGTG NM_024552.2 TCCTCTGACTACCTGCTGGAGGCCTGTAAGATGGTCAACTACATGCAGTATCAGCAAGTG ************************************************************ HsCD00329604 TGCGACGCTCTCTTCCTCATCTTCTCCTTTGTCTTCTTCTACACCCGACTGGTCCTCTTT NM_024552.2 TGCGACGCTCTCTTCCTCATCTTCTCCTTTGTCTTCTTCTACACCCGACTGGTCCTCTTT ************************************************************ HsCD00329604 CCCACCCAGATCCTCTACACCACATACTACGAGTCCATCAGCAACAGGGGCCCCTTCTTC NM_024552.2 CCCACCCAGATCCTCTACACCACATACTACGAGTCCATCAGCAACAGGGGCCCCTTCTTC ************************************************************ HsCD00329604 GGCTACTACTTCTTCAACGGGCTTCTGATGTTGCTGCAGCTGCTGCACGTGTTCTGGTCT NM_024552.2 GGCTACTACTTCTTCAACGGGCTTCTGATGTTGCTGCAGCTGCTGCACGTGTTCTGGTCT ************************************************************ HsCD00329604 TGCCTCATTCTGCGCATGCTCTATAGCTTCATGAAGAAGGGCCAGATGGAGAAGGACATT NM_024552.2 TGCCTCATTCTGCGCATGCTCTATAGCTTCATGAAGAAGGGCCAGATGGAGAAGGACATT ************************************************************ HsCD00329604 CGTAGTGATGTAGAAGAATCAGACTCCAGTGAGGAGGTGGCGGCGGCCCAGGAACCTCTG NM_024552.2 CGTAGTGATGTAGAAGAATCAGACTCCAGTGAGGAGGCGGCGGCGGCCCAGGAACCTCTG ************************************* ********************** HsCD00329604 CAGCTAAAGAACGGGGCAGCTGGAGGGCCCAGGCCAGCCCCCACTGATGGCCCTCAGAGC NM_024552.2 CAGCTAAAGAACGGGGCAGCTGGAGGGCCCAGGCCAGCCCCCACTGATGGCCCTCGGAGC *******************************************************.**** HsCD00329604 CGGGTGGCCGGGCGTCTGACCAACAGGCACACAACAGCCACATTG NM_024552.2 CGGGTGGCCGGGCGTCTGACCAACAGGCACACAACAGCCACATAG *******************************************:*
Pathways
Reactome : | Metabolism |
---|---|
Reactome : | Metabolism of lipids and lipoproteins |
Reactome : | Sphingolipid de novo biosynthesis |
Reactome : | Sphingolipid metabolism |
Protein
SMART domain : | HOX : Homeodomain |
---|---|
SMART domain : | TLC : TRAM, LAG1 and CLN8 homology domains. |
UniProt : | Q9HA82 |
UniProt : | Q53HF9 |
HPRD : | 13962 |
Clone
Cloning Information : | 269106 |
---|---|
HIP Master Clone ID : | 170021 |
Original Clone ID : | FLH269106.01L |
Genome
Chromosome : | 19 |
---|---|
Map Location : | 19p13.2 |
Ensembl : | ENSG00000090661 |
Reagents
Labome : | CERS4-antibody |
---|