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TEF (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  TEF
Gene Name:  thyrotrophic embryonic factor
Sequence             
Original Clone ID: FLH269117.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329615

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 912nts         Open reading frame : 1 to 912
Reference Sequence Alignment

ATGTCCGACGCGGGCGGCGGAAAGAAGCCGCCTGTGGACCCGCAGGCAGGACCCGGTCCG
GGGCCGGGGCGCGCAGCTGGGGAAAGGGGCCTGTCGGGGTCCTTCCCCCTGGTCCTGAAG
AAGCTGATGGAGAACCCCCCGCGCGAGGCGCGCCTCGATAAGGAAAAGGGGAAGGAAAAG
CTGGAGGAGGACGAGGCCGCAGCCGCCAGCACCATGGCTGTCTCAGCCTCCCTCATGCCA
CCCATCTGGGACAAGACCATCCCATATGATGGCGAATCTTTCCACCTGGAGTACATGGAC
CTGGATGAGTTCCTGCTGGAGAATGGCATCCCCGCCAGCCCCACCCACCTGGCCCACAAC
CTGCTGCTGCCTGTAGCAGAGCTAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCATCC
CCACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTGAAACTGTGTCCAGCACAGAATCT
TCCCTGGAGAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGAT
GTGAACTTCAATCCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTC
TTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTATGATCAAA
AAGGCCAAGAAGGTCTTTGTCCCCGACGAGCAGAAGGATGAAAAGTACTGGACAAGACGC
AAGAAGAACAACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGCCTGAAAGAGAATCAG
ATCACCATCCGGGCAGCCTTCCTGGAGAAGGAGAACACAGCCCTGCGGACGGAGGTGGCC
GAGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATAC
GGGCCCTTGTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 997
Start on reference sequence 86
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : TEF
Symbol Nomenclature : TEF
Designation : thyrotroph embryonic factor
Full Nomenclature : thyrotrophic embryonic factor
GENEID : 7008
Locus Tag : CTA-223H9.6
HGNC : 11722
MIM : 188595
Vega : OTTHUMG00000150968
Target GenBank: BC039258

 

Reference Sequence Alignment

  

HsCD00329615      ATGTCCGACGCGGGCGGCGGAAAGAAGCCGCCTGTGGACCCGCAGGCAGGACCCGGTCCG
NM_003216.3       ATGTCCGACGCGGGCGGCGGAAAGAAGCCGCCTGTGGACCCGCAGGCAGGACCCGGTCCG
                  ************************************************************

HsCD00329615      GGGCCGGGGCGCGCAGCTGGGGAAAGGGGCCTGTCGGGGTCCTTCCCCCTGGTCCTGAAG
NM_003216.3       GGGCCGGGGCGCGCAGCTGGGGAAAGGGGCCTGTCGGGGTCCTTCCCCCTGGTCCTGAAG
                  ************************************************************

HsCD00329615      AAGCTGATGGAGAACCCCCCGCGCGAGGCGCGCCTCGATAAGGAAAAGGGGAAGGAAAAG
NM_003216.3       AAGCTGATGGAGAACCCCCCGCGCGAGGCGCGCCTCGATAAGGAAAAGGGGAAGGAAAAG
                  ************************************************************

HsCD00329615      CTGGAGGAGGACGAGGCCGCAGCCGCCAGCACCATGGCTGTCTCAGCCTCCCTCATGCCA
NM_003216.3       CTGGAGGAGGACGAGGCCGCAGCCGCCAGCACCATGGCTGTCTCAGCCTCCCTCATGCCA
                  ************************************************************

HsCD00329615      CCCATCTGGGACAAGACCATCCCATATGATGGCGAATCTTTCCACCTGGAGTACATGGAC
NM_003216.3       CCCATCTGGGACAAGACCATCCCATATGATGGCGAATCTTTCCACCTGGAGTACATGGAC
                  ************************************************************

HsCD00329615      CTGGATGAGTTCCTGCTGGAGAATGGCATCCCCGCCAGCCCCACCCACCTGGCCCACAAC
NM_003216.3       CTGGATGAGTTCCTGCTGGAGAATGGCATCCCCGCCAGCCCCACCCACCTGGCCCACAAC
                  ************************************************************

HsCD00329615      CTGCTGCTGCCTGTAGCAGAGCTAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCATCC
NM_003216.3       CTGCTGCTGCCTGTAGCAGAGCTAGAAGGGAAGGAGTCTGCCAGCTCTTCCACAGCATCC
                  ************************************************************

HsCD00329615      CCACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTGAAACTGTGTCCAGCACAGAATCT
NM_003216.3       CCACCATCCTCCTCCACTGCCATCTTTCAGCCCTCTGAAACCGTGTCCAGCACAGAATCT
                  ***************************************** ******************

HsCD00329615      TCCCTGGAGAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGAT
NM_003216.3       TCCCTGGAGAAGGAGAGGGAGACTCCCAGTCCCATCGACCCCAATTGTGTGGAAGTGGAT
                  ************************************************************

HsCD00329615      GTGAACTTCAATCCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTC
NM_003216.3       GTGAACTTCAATCCGGACCCCGCCGACCTGGTGCTCTCCAGTGTGCCAGGCGGGGAGCTC
                  ************************************************************

HsCD00329615      TTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTATGATCAAA
NM_003216.3       TTCAACCCTCGGAAGCACAAGTTTGCTGAGGAGGACCTGAAGCCCCAGCCTATGATCAAA
                  ************************************************************

HsCD00329615      AAGGCCAAGAAGGTCTTTGTCCCCGACGAGCAGAAGGATGAAAAGTACTGGACAAGACGC
NM_003216.3       AAGGCCAAGAAGGTCTTTGTCCCCGACGAGCAGAAGGATGAAAAGTACTGGACAAGACGC
                  ************************************************************

HsCD00329615      AAGAAGAACAACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGCCTGAAAGAGAATCAG
NM_003216.3       AAGAAGAACAACGTGGCAGCTAAACGGTCACGGGATGCCCGGCGCCTGAAAGAGAATCAG
                  ************************************************************

HsCD00329615      ATCACCATCCGGGCAGCCTTCCTGGAGAAGGAGAACACAGCCCTGCGGACGGAGGTGGCC
NM_003216.3       ATCACCATCCGGGCAGCCTTCCTGGAGAAGGAGAACACAGCCCTGCGGACGGAGGTGGCC
                  ************************************************************

HsCD00329615      GAGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATAC
NM_003216.3       GAGCTACGCAAGGAGGTGGGCAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATAC
                  ************************************************************

HsCD00329615      GGGCCCTTGTTG
NM_003216.3       GGGCCCTTGTAA
                  **********:.

Protein

SMART domain : BRLZ : basic region leucin zipper
UniProt : Q10587
HPRD : 01783

Clone

Cloning Information : 269117
HIP Master Clone ID : 141845
Original Clone ID : FLH269117.01L

Organism


TAX_ID : 9606
Species Specific ID: 7008

Genome

Chromosome : 22
Map Location : 22q13.2
Ensembl : ENSG00000167074

Reagents

Labome : TEF-antibody