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ZNF677 (Homo sapiens) in pLenti6.2/V5-DEST (V5-tagged lentiviral mammalian expression vector)

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Explanation of Terms


Gene: Gene Symbol:  ZNF677
Gene Name:  zinc finger protein 677
Sequence             
Original Clone ID: FLH268158.01L
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLenti6.2/V5-DEST               Format:  FUSION
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
HsCD00329701

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1755nts         Open reading frame : 1 to 1755
Reference Sequence Alignment

ATGGCTCTTTCTCAGGGACTGTTTACATTCAAGGATGTGGCCATAGAATTCTCTCAAGAG
GAGTGGGAGTGCCTGGACCCTGCCCAGAGGGCCTTGTACAGGGACGTGATGTTGGAGAAC
TACAGGAACCTGCTTTCTCTCGATGAGGATAACATCCCTCCAGAAGATGATATTTCTGTT
GGATTTACAAGCAAGGGATTATCACCAAAGGAAAATAATAAAGAGGAATTATACCATCTG
GTGATATTAGAAAGAAAGGAAAGCCATGGCATCAACAATTTTGACCTCAAGGAAGTCTGG
GAAAATATGCCTAAGTTTGACAGCCTGTGGGACTATGATGTAAAAAATTACAAAGGAATG
CCTTTGACCTGTAACAAAAATCTCACTCACAGAAAAGATCAACAACATAATAAATCCTCA
ATACATTTCTCTTTAAAGCAGAGTGTTTCTATAAGAGATAGTGCACACCAGTATTTCATC
CATGACAAGCCATTTATAAGGAATTTGTTAAAACTGAAAAATAACATAAGGTATGCCGGA
AACAAATACGTGAAGTGTTTTGAAAATAAAATTGGATTAAGCTTACAGGCACAGCTGGCT
GAACTACAGAGATTTCAAACTGGGGAGAAAATGTATGAATGTAATCCAGTTGAGAAGTCT
ATCAATAGTTCCTCAGTTTCACCACTTCCTCCTTGTGTCAAAAACATTTGTAATAAATAT
AGGAAGATTTTGAAATACCCTTTATTACATACACAGTATGGGAGAACACACATTAGAGAA
AAATCATACAAGTGTAATGACTGTGGAAAGGCTTTTAGCAAAAGTTCGAACCTCACTAAT
CATCAGAGAATTCACTCTGGACAGAGACCTTACAAATGTAACGAGTGTGGCAAAGCCTTT
AACCAGTGTTCGAACCTCACTAGGCATCAGAGAGTCCATACAGGAGAGAAACCATATCAA
TGTAATATATGTGGCAAGGTCTGTAGTCAAAATTCAAATCTTGCAAGTCATCAGAGGATG
CATACTGGAGAGAAACCTTACAAATGTAATGAATGTGGTAAGGCATTTATCCAGCGTTCA
CACCTTTGGGGTCATGAAAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAATGT
GACAAAGCCTTTGCTGAACGTTCAAGCCTTACCCAACATAAGAGAATCCATACTGGAGAG
AAGCCTTACATATGTAATGAGTGTGGCAAAGCTTTTAAGCAGTGCTCACATCTCACTAGG
CATCAGAATATACATCCTGGAGAGAAACCACACAAATGTAATGTGTGTGGCAGGGCTTTT
ATCCAAAGTTCAAGTCTTGTGGAACATCAGAGAATTCACACTGGAGAAAAACCTTACAAA
TGTAATAAATGTGATAAAGCTTTTATCAAACGTTCACACCTTTGGGGTCATCAGAGAACT
CATACTGGAGAGAAACCTTACAAATGTACTGAATGTGGCAAAGCCTTTACTGAACGTTCA
AATCTTACTCAGCATAAGAAAATCCATACTGGAGAGAAACCTTACAAATGTACTGAATGT
GGCAAAGCTTTTACCCAATTTGCAAACCTCACTAGACACCAGAAAATACACATTGAAAAG
AAACATTGTAAACATAATATACATGGTAATGCTTTATTCCAAAGTTCAAACCTTGGAGAT
CATCAAAAAAGTTATAATAGAGAAAAACATATCAAATATAATGAGACAAAAATTAAGTAT
TCAAGCTGTACCTTG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 1906
Start on reference sequence 152
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLenti6.2/V5-DEST

pLenti6.2V5-DEST in advanced viewed

Synonyms: pLenti6.2/V5-DEST
Sequencing Primer: Forward:  CMV forward
Reverse:  V5 reverse
Description: Lentiviral mammalian expression vector;CMV promoter and C-terminal V5 tag; ampicillin resistance in bacteria; blasticidin resistance in mammalian cells; Gateway recombinational cloning.
Comments: None
Size (bp): 8813
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name: Invitrogen
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin pUC ori pUC origin of replication 7733 8406
death cassette ccdB ccdB death cassette (removed when insert is present) 3767 3976
packaging signal HIV-1 psi HIV-1 psi packaging signal 521 565
poly-A signal SV40 SV40 polyadenylation signal 5639 5770
promoter RSV RSV/5' LTR hybrid promoter 1 410
promoter CMV CMV promoter driving gene of interest 1809 2392
promoter PGK PGK promoter to drive selection marker in mammalian cells 4266 4771
recombination site attR2 attR2 recombinational cloning site 4127 4142
recombination site attR1 attR1 recombinational cloning site 2440 2456
response element HIV-1 RRE HIV-1 Rev response element (RRE) 1075 1308
selectable marker AmpR Ampicillin resistance gene for selection in bacteria 6728 7588
selectable marker BlastR Blasticidin resistance gene in mammalian cells 4849 5249
selectable marker CmR chloramphenicol resistance marker (removed in plasmids with insert) 2673 3329
splice acceptor site 3' splice acceptor two 3' splice acceptors at 1656 and 1684 1656 1656
splice donor site 5' splice donor 5' splice donor 520 520
tag V5 C-terminal V5 epitope tag 4197 4238

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : ZNF677
Symbol Nomenclature : ZNF677
Designation : hypothetical protein MGC48625
Full Nomenclature : zinc finger protein 677
GENEID : 342926
HGNC : 28730
Vega : OTTHUMG00000182890
Target GenBank: BC050038

 

Reference Sequence Alignment

  

HsCD00329701      ATGGCTCTTTCTCAGGGACTGTTTACATTCAAGGATGTGGCCATAGAATTCTCTCAAGAG
NM_182609.2       ATGGCTCTTTCTCAGGGACTGTTTACATTCAAGGATGTGGCCATAGAATTCTCTCAAGAG
                  ************************************************************

HsCD00329701      GAGTGGGAGTGCCTGGACCCTGCCCAGAGGGCCTTGTACAGGGACGTGATGTTGGAGAAC
NM_182609.2       GAGTGGGAGTGCCTGGACCCTGCCCAGAGGGCCTTGTACAGGGACGTGATGTTGGAGAAC
                  ************************************************************

HsCD00329701      TACAGGAACCTGCTTTCTCTCGATGAGGATAACATCCCTCCAGAAGATGATATTTCTGTT
NM_182609.2       TACAGGAACCTGCTTTCTCTCGATGAGGATAACATCCCTCCAGAAGATGATATTTCTGTT
                  ************************************************************

HsCD00329701      GGATTTACAAGCAAGGGATTATCACCAAAGGAAAATAATAAAGAGGAATTATACCATCTG
NM_182609.2       GGATTTACAAGCAAGGGATTATCACCAAAGGAAAATAATAAAGAGGAATTATACCATCTG
                  ************************************************************

HsCD00329701      GTGATATTAGAAAGAAAGGAAAGCCATGGCATCAACAATTTTGACCTCAAGGAAGTCTGG
NM_182609.2       GTGATATTAGAAAGAAAGGAAAGCCATGGCATCAACAATTTTGACCTCAAGGAAGTCTGG
                  ************************************************************

HsCD00329701      GAAAATATGCCTAAGTTTGACAGCCTGTGGGACTATGATGTAAAAAATTACAAAGGAATG
NM_182609.2       GAAAATATGCCTAAGTTTGACAGCCTGTGGGACTATGATGTAAAAAATTACAAAGGAATG
                  ************************************************************

HsCD00329701      CCTTTGACCTGTAACAAAAATCTCACTCACAGAAAAGATCAACAACATAATAAATCCTCA
NM_182609.2       CCTTTGACCTGTAACAAAAATCTCACTCACAGAAAAGATCAACAACATAATAAATCCTCA
                  ************************************************************

HsCD00329701      ATACATTTCTCTTTAAAGCAGAGTGTTTCTATAAGAGATAGTGCACACCAGTATTTCATC
NM_182609.2       ATACATTTCTCTTTAAAGCAGAGTGTTTCTATAAGAGATAGTGCACACCAGTATTTCATC
                  ************************************************************

HsCD00329701      CATGACAAGCCATTTATAAGGAATTTGTTAAAACTGAAAAATAACATAAGGTATGCCGGA
NM_182609.2       CATGACAAGCCATTTATAAGGAATTTGTTAAAACTGAAAAATAACATAAGGTATGCCGGA
                  ************************************************************

HsCD00329701      AACAAATACGTGAAGTGTTTTGAAAATAAAATTGGATTAAGCTTACAGGCACAGCTGGCT
NM_182609.2       AACAAATACGTGAAGTGTTTTGAAAATAAAATTGGATTAAGCTTACAGGCACAGCTGGCT
                  ************************************************************

HsCD00329701      GAACTACAGAGATTTCAAACTGGGGAGAAAATGTATGAATGTAATCCAGTTGAGAAGTCT
NM_182609.2       GAACTACAGAGATTTCAAACTGGGGAGAAAATGTATGAATGTAATCCAGTTGAGAAGTCT
                  ************************************************************

HsCD00329701      ATCAATAGTTCCTCAGTTTCACCACTTCCTCCTTGTGTCAAAAACATTTGTAATAAATAT
NM_182609.2       ATCAATAGTTCCTCAGTTTCACCACTTCCTCCTTGTGTCAAAAACATTTGTAATAAATAT
                  ************************************************************

HsCD00329701      AGGAAGATTTTGAAATACCCTTTATTACATACACAGTATGGGAGAACACACATTAGAGAA
NM_182609.2       AGGAAGATTTTGAAATACCCTTTATTACATACACAGTATGGGAGAACACACATTAGAGAA
                  ************************************************************

HsCD00329701      AAATCATACAAGTGTAATGACTGTGGAAAGGCTTTTAGCAAAAGTTCGAACCTCACTAAT
NM_182609.2       AAATCATACAAGTGTAATGACTGTGGAAAGGCTTTTAGCAAAAGTTCGAACCTCACTAAT
                  ************************************************************

HsCD00329701      CATCAGAGAATTCACTCTGGACAGAGACCTTACAAATGTAACGAGTGTGGCAAAGCCTTT
NM_182609.2       CATCAGAGAATTCACTCTGGACAGAGACCTTACAAATGTAACGAGTGTGGCAAAGCCTTT
                  ************************************************************

HsCD00329701      AACCAGTGTTCGAACCTCACTAGGCATCAGAGAGTCCATACAGGAGAGAAACCATATCAA
NM_182609.2       AACCAGTGTTCGAACCTCACTAGGCATCAGAGAGTCCATACAGGAGAGAAACCATATCAA
                  ************************************************************

HsCD00329701      TGTAATATATGTGGCAAGGTCTGTAGTCAAAATTCAAATCTTGCAAGTCATCAGAGGATG
NM_182609.2       TGTAATATATGTGGCAAGGTCTGTAGTCAAAATTCAAATCTTGCAAGTCATCAGAGGATG
                  ************************************************************

HsCD00329701      CATACTGGAGAGAAACCTTACAAATGTAATGAATGTGGTAAGGCATTTATCCAGCGTTCA
NM_182609.2       CATACTGGAGAGAAACCTTACAAATGTAATGAATGTGGTAAGGCATTTATCCAGCGTTCA
                  ************************************************************

HsCD00329701      CACCTTTGGGGTCATGAAAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAATGT
NM_182609.2       CACCTTTGGGGTCATGAAAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAATGT
                  ************************************************************

HsCD00329701      GACAAAGCCTTTGCTGAACGTTCAAGCCTTACCCAACATAAGAGAATCCATACTGGAGAG
NM_182609.2       GACAAAGCCTTTGCTGAACGTTCAAGCCTTACCCAACATAAGAGAATCCATACTGGAGAG
                  ************************************************************

HsCD00329701      AAGCCTTACATATGTAATGAGTGTGGCAAAGCTTTTAAGCAGTGCTCACATCTCACTAGG
NM_182609.2       AAGCCTTACATATGTAATGAGTGTGGCAAAGCTTTTAAGCAGTGCTCACATCTCACTAGG
                  ************************************************************

HsCD00329701      CATCAGAATATACATCCTGGAGAGAAACCACACAAATGTAATGTGTGTGGCAGGGCTTTT
NM_182609.2       CATCAGAATATACATCCTGGAGAGAAACCACACAAATGTAATGTGTGTGGCAGGGCTTTT
                  ************************************************************

HsCD00329701      ATCCAAAGTTCAAGTCTTGTGGAACATCAGAGAATTCACACTGGAGAAAAACCTTACAAA
NM_182609.2       ATCCAAAGTTCAAGTCTTGTGGAACATCAGAGAATTCACACTGGAGAAAAACCTTACAAA
                  ************************************************************

HsCD00329701      TGTAATAAATGTGATAAAGCTTTTATCAAACGTTCACACCTTTGGGGTCATCAGAGAACT
NM_182609.2       TGTAATAAATGTGATAAAGCTTTTATCAAACGTTCACACCTTTGGGGTCATCAGAGAACT
                  ************************************************************

HsCD00329701      CATACTGGAGAGAAACCTTACAAATGTACTGAATGTGGCAAAGCCTTTACTGAACGTTCA
NM_182609.2       CATACTGGAGAGAAACCTTACAAATGTACTGAATGTGGCAAAGCCTTTACTGAACGTTCA
                  ************************************************************

HsCD00329701      AATCTTACTCAGCATAAGAAAATCCATACTGGAGAGAAACCTTACAAATGTACTGAATGT
NM_182609.2       AATCTTACTCAGCATAAGAAAATCCATACTGGAGAGAAACCTTACAAATGTACTGAATGT
                  ************************************************************

HsCD00329701      GGCAAAGCTTTTACCCAATTTGCAAACCTCACTAGACACCAGAAAATACACATTGAAAAG
NM_182609.2       GGCAAAGCTTTTACCCAATTTGCAAACCTCACTAGACACCAGAAAATACACATTGAAAAG
                  ************************************************************

HsCD00329701      AAACATTGTAAACATAATATACATGGTAATGCTTTATTCCAAAGTTCAAACCTTGGAGAT
NM_182609.2       AAACATTGTAAACATAATATACATGGTAATGCTTTATTCCAAAGTTCAAACCTTGGAGAT
                  ************************************************************

HsCD00329701      CATCAAAAAAGTTATAATAGAGAAAAACATATCAAATATAATGAGACAAAAATTAAGTAT
NM_182609.2       CATCAAAAAAGTTATAATAGAGAAAAACATATCAAATATAATGAGACAAAAATTAAGTAT
                  ************************************************************

HsCD00329701      TCAAGCTGTACCTTG
NM_182609.2       TCAAGCTGTACCTAG
                  *************:*

Pathways

Reactome : Gene Expression
Reactome : Generic Transcription Pathway

Protein

SMART domain : ZnF_C2H2 : zinc finger
SMART domain : KRAB : krueppel associated box
UniProt : Q86XU0
HPRD : 14658

Clone

Cloning Information : 268158
HIP Master Clone ID : 193202
Original Clone ID : FLH268158.01L

Organism


TAX_ID : 9606
Species Specific ID: 342926

Genome

Chromosome : 19
Map Location : 19q13.42
Ensembl : ENSG00000197928

Reagents

Labome : ZNF677-antibody