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FBXO8 (Homo sapiens) in pANT7_cGST (GST-tagged in vitro expression vector)

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Explanation of Terms


Gene: Gene Symbol:  FBXO8
Gene Name:  F-box protein 8
Sequence              Map: pANT7_cGST.doc
Original Clone ID: None
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pANT7_cGST               Format:  FUSION
Source: Center for Personalized Diagnostics
Description: None
Comments: generated from ORFeome entry clone (IMAGE:100071176)
Mutation/
Discrepancy :
No / No
Publications: None
Authors: Center for Personalized Diagnostics
HsCD00356314

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 957nts         Open reading frame : 1 to 957
Reference Sequence Alignment

ATGGGTCAAGGGTTGTGGAGAGTGGTCAGAAACCAGCAGCTGCAACAAGAAGGCTACAGT
GAGCAAGGCTACCTCACCAGAGAGCAGAGCAGGAGAATGGCTGCGAGCAACATTTCTAAC
ACCAATCATCGTAAACAAGTCCAAGGAGGCATTGACATATATCATCTTTTGAAGGCAAGG
AAATCGAAAGAACAGGAAGGATTCATTAATTTGGAAATGTTGCCTCCTGAGCTAAGCTTT
ACCATCTTGTCCTACCTGAATGCAACTGACCTTTGCTTGGCTTCATGTGTTTGGCAGGAC
CTTGCGAATGATGAACTTCTCTGGCAAGGGTTGTGCAAATCCACTTGGGGTCACTGTTCC
ATATACAATAAGAACCCACCTTTAGGATTTTCTTTTAGAAAATTGTATATGCAGCTGGAT
GAAGGCAGCCTCACCTTTAATGCCAACCCAGATGAGGGAGTGAACTACTTTATGTCCAAG
GGTATCCTGGATGATTCGCCAAAGGAAATAGCAAAGTTTATCTTCTGTACAAGAACACTA
AATTGGAAAAAACTGAGAATCTATCTTGATGAAAGGAGAGATGTCTTGGATGACCTTGTA
ACATTGCATAATTTTAGAAATCAGTTCTTGCCAAATGCACTGAGAGAATTTTTTCGTCAT
ATCCATGCCCCTGAAGAGCGTGGAGAGTATCTTGAAACTCTTATAACAAAGTTCTCACAT
AGATTCTGTGCTTGCAACCCTGATTTAATGCGAGAACTTGGCCTTAGTCCTGATGCTGTC
TATGTACTGTGCTACTCTTTGATTCTACTTTCCATTGACCTCACTAGCCCTCATGTGAAG
AATAAAATGTCAAAAAGGGAATTTATTCGAAATACCCGTCGCGCTGCTCAAAATATTAGT
GAAGATTTTGTAGGGCATCTTTATGACAATATCTACCTTATTGGCCATGTGGCTGCA


Coding Sequence Details
Insert Sequence Verified?: Y Verification Method: Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pANT7_cGST

pANT7_cGST in advanced viewed

Synonyms: pANT7-cGST
Sequencing Primer: Forward:  NAP150
Reverse:  NAP138R
Description: with tag/fusion/marker assay, Gateway and reg, acceptor (destination), recombinational cloning clone, in vitro transcription expression with attR1 and NAP150 and ccdB and attR2 and GST and CmR and T7 and NAP138 and ColE and AmpR ampicillin resistance in bacterial
Comments: One in a series of pANT7 vectors made by A. Lau and N. Ramachandran for use with NAPPA arrays. Can be used for cell free expression of the gene insert using human IVTT from Thermo Fisher or rabbit reticulocyte systems
Size (bp): 5964
Parent Vector: None
Empty Vector: EvNO00023103
Properties: Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name: Al Lau
Niroshan Ramachandran
Joshua LaBaer
Publications: PMID: 15232106
Title: Self-assembling protein microarrays

Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin ColE ColE1 bacterial origin of replication 3931 3249
death cassette ccdB ccdB death cassette present in 'empty vector' form only (replace with gene of interest) 1876 2085
primer NAP138 NAP138 reverse sequencing primer 5? TGTTTCGCCATTTATCACCTTC 3? 2405 2384
primer NAP150 Forward sequencing primer NAP150 5?-CCC ATT GTA TGG GAT CTG ATC-3? 388 408
promoter T7 T7 transcriptional start sequence 5940 5964
recombination site attR2 AttR2 site for recombination in empty vector 2236 2251
recombination site attR1 AttR1 site for recombination in empty vector 549 565
selectable marker CmR chloramphenicol resistance 782 1438
selectable marker AmpR ampicillin resistance gene 4688 4029
tag GST Glutathione transferase (GST) tag 2282 2950

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : FBXO8
Symbol Nomenclature : FBXO8
SYNONYM : FBS; FBX8
Designation : F-box only protein 8|F-box protein Fbx8|F-box/SEC7 protein FBS
Full Nomenclature : F-box protein 8
GENEID : 26269
Locus Tag : DC10
GenBank Accession : 567710
HGNC : 13587
MIM : 605649
Vega : OTTHUMG00000160746
Target GenBank: HQ447833

 

Reference Sequence Alignment

  

HsCD00356314      ATGGGTCAAGGGTTGTGGAGAGTGGTCAGAAACCAGCAGCTGCAACAAGAAGGCTACAGT
NM_012180.2       ATGGGTCAAGGGTTGTGGAGAGTGGTCAGAAACCAGCAGCTGCAACAAGAAGGCTACAGT
                  ************************************************************

HsCD00356314      GAGCAAGGCTACCTCACCAGAGAGCAGAGCAGGAGAATGGCTGCGAGCAACATTTCTAAC
NM_012180.2       GAGCAAGGCTACCTCACCAGAGAGCAGAGCAGGAGAATGGCTGCGAGCAACATTTCTAAC
                  ************************************************************

HsCD00356314      ACCAATCATCGTAAACAAGTCCAAGGAGGCATTGACATATATCATCTTTTGAAGGCAAGG
NM_012180.2       ACCAATCATCGTAAACAAGTCCAAGGAGGCATTGACATATATCATCTTTTGAAGGCAAGG
                  ************************************************************

HsCD00356314      AAATCGAAAGAACAGGAAGGATTCATTAATTTGGAAATGTTGCCTCCTGAGCTAAGCTTT
NM_012180.2       AAATCGAAAGAACAGGAAGGATTCATTAATTTGGAAATGTTGCCTCCTGAGCTAAGCTTT
                  ************************************************************

HsCD00356314      ACCATCTTGTCCTACCTGAATGCAACTGACCTTTGCTTGGCTTCATGTGTTTGGCAGGAC
NM_012180.2       ACCATCTTGTCCTACCTGAATGCAACTGACCTTTGCTTGGCTTCATGTGTTTGGCAGGAC
                  ************************************************************

HsCD00356314      CTTGCGAATGATGAACTTCTCTGGCAAGGGTTGTGCAAATCCACTTGGGGTCACTGTTCC
NM_012180.2       CTTGCGAATGATGAACTTCTCTGGCAAGGGTTGTGCAAATCCACTTGGGGTCACTGTTCC
                  ************************************************************

HsCD00356314      ATATACAATAAGAACCCACCTTTAGGATTTTCTTTTAGAAAATTGTATATGCAGCTGGAT
NM_012180.2       ATATACAATAAGAACCCACCTTTAGGATTTTCTTTTAGAAAATTGTATATGCAGCTGGAT
                  ************************************************************

HsCD00356314      GAAGGCAGCCTCACCTTTAATGCCAACCCAGATGAGGGAGTGAACTACTTTATGTCCAAG
NM_012180.2       GAAGGCAGCCTCACCTTTAATGCCAACCCAGATGAGGGAGTGAACTACTTTATGTCCAAG
                  ************************************************************

HsCD00356314      GGTATCCTGGATGATTCGCCAAAGGAAATAGCAAAGTTTATCTTCTGTACAAGAACACTA
NM_012180.2       GGTATCCTGGATGATTCGCCAAAGGAAATAGCAAAGTTTATCTTCTGTACAAGAACACTA
                  ************************************************************

HsCD00356314      AATTGGAAAAAACTGAGAATCTATCTTGATGAAAGGAGAGATGTCTTGGATGACCTTGTA
NM_012180.2       AATTGGAAAAAACTGAGAATCTATCTTGATGAAAGGAGAGATGTCTTGGATGACCTTGTA
                  ************************************************************

HsCD00356314      ACATTGCATAATTTTAGAAATCAGTTCTTGCCAAATGCACTGAGAGAATTTTTTCGTCAT
NM_012180.2       ACATTGCATAATTTTAGAAATCAGTTCTTGCCAAATGCACTGAGAGAATTTTTTCGTCAT
                  ************************************************************

HsCD00356314      ATCCATGCCCCTGAAGAGCGTGGAGAGTATCTTGAAACTCTTATAACAAAGTTCTCACAT
NM_012180.2       ATCCATGCCCCTGAAGAGCGTGGAGAGTATCTTGAAACTCTTATAACAAAGTTCTCACAT
                  ************************************************************

HsCD00356314      AGATTCTGTGCTTGCAACCCTGATTTAATGCGAGAACTTGGCCTTAGTCCTGATGCTGTC
NM_012180.2       AGATTCTGTGCTTGCAACCCTGATTTAATGCGAGAACTTGGCCTTAGTCCTGATGCTGTC
                  ************************************************************

HsCD00356314      TATGTACTGTGCTACTCTTTGATTCTACTTTCCATTGACCTCACTAGCCCTCATGTGAAG
NM_012180.2       TATGTACTGTGCTACTCTTTGATTCTACTTTCCATTGACCTCACTAGCCCTCATGTGAAG
                  ************************************************************

HsCD00356314      AATAAAATGTCAAAAAGGGAATTTATTCGAAATACCCGTCGCGCTGCTCAAAATATTAGT
NM_012180.2       AATAAAATGTCAAAAAGGGAATTTATTCGAAATACCCGTCGCGCTGCTCAAAATATTAGT
                  ************************************************************

HsCD00356314      GAAGATTTTGTAGGGCATCTTTATGACAATATCTACCTTATTGGCCATGTGGCTGCA---
NM_012180.2       GAAGATTTTGTAGGGCATCTTTATGACAATATCTACCTTATTGGCCATGTGGCTGCATAA
                  *********************************************************   

Pathways

NCI : Arf6 signaling events

Protein

SMART domain : Sec7 : Sec7 domain
UniProt : Q8IXA8
UniProt : Q9NRD0
HPRD : 07293

Clone

Cloning Information : 567710

Organism


TAX_ID : 9606
Species Specific ID: 26269

Genome

Chromosome : 4
Map Location : 4q34.1
Ensembl : ENSG00000164117

Reagents

Labome : FBXO8-antibody