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PER3 (Homo sapiens) in pLX304 (Gateway V5-tagged lentiviral expression vector)

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Explanation of Terms


Gene: Gene Symbol:  PER3
Gene Name:  period circadian clock 3
Sequence             
Original Clone ID: ccsbBroad304_11314
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLX304               Format:  FUSION
Source: The ORFeome Collaboration
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors: The ORFeome Collaboration
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
Harvard Medical School
HsCD00438145

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1135nts         Open reading frame : 1 to 1135
Reference Sequence Alignment

ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCCCTGGGC
GAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGC
AGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTTGTCCAA
GAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGATGCCCTC
AACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAGATTCTC
AGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
ATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCATTTCTG
TCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAGAAAGAT
GTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTAC
GCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCTGCACGG
TATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAAGACAGAAAG
CAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCACCCT
GCCCAGCCAGAATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGATTCACTCT
GGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCACACACACCCCA
GGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTACCTACCTCAG
GACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTCTCTGATGGTT
GCCATACACCAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACATTCTCCCATT
CGATTTTGTACTCAAAACGGAGACTACATCATACTGGATTCCAGTTGGTCCAGCTTTGTG
AATCCCTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pLX304

pLX304 in advanced viewed

Synonyms: None
Sequencing Primer: Forward:  CMV forward
Reverse:  Unknown
Description: Gateway compatible lentiviral vector with a C-terminal V5 tag and CMV promoter for mammalian cell expression; blasticidin resistance in mammalian cells; ampicillin resistance in bacteria; Gateway cloning.
Comments: None
Size (bp): 9377
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, recombinational cloning, with tag/fusion/marker
Author Name: David Root
Publications: PMID: 21706014
Title: A public genome-scale lentiviral expression library of human ORFs

Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
polypurine tract cPPT human immunodeficiency virus type 1 central polypurine tract 3027 3042
promoter T7 T7 promoter 3690 3672
promoter CMV CMV promoter 14 566
recombination site attR1 595 719
recombination site attR2 2282 2297
selectable marker CAT CAT/CamR Chloramphenical resistance 828 1487
selectable marker ccdB Control of cell death B gene 1829 2134
selectable marker AmpR Ampicillin resistance gene 4444 5304
selectable marker BlastR Blasticidin resistance gene 8753 9148
tag V5 C-terminal V5 tag 2301 2342
trxn regulatory element WPRE woodchuck hepatitis post-transcriptional regulatory element 2386 2961

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : PER3
Symbol Nomenclature : PER3
SYNONYM : GIG13
Designation : cell growth-inhibiting gene 13 protein|circadian clock protein PERIOD 3|growth-inhibiting protein 13|hPER3|period 3|period circadian protein 3|period circadian protein homolog 3|period homolog 3
Full Nomenclature : period circadian clock 3
GENEID : 8863
Locus Tag : RP3-467L1.3
GenBank Accession : JF432535
HGNC : 8847
MIM : 603427
Vega : OTTHUMG00000001216
Target GenBank: JF432535

 

Reference Sequence Alignment

  

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCCCTGGGC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCCCTGGGC
XM_005263522.1      ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCCCTGGGC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      GAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGC
XM_005263522.1      GAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCGGACAGC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTTGTCCAA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      AGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTTGTCCAA
XM_005263522.1      AGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTTGTCCAA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGATGCCCTC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      GAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGATGCCCTC
XM_005263522.1      GAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGATGCCCTC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAGATTCTC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      AACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAGATTCTC
XM_005263522.1      AACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAGATTCTC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      AGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
XM_005263522.1      AGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTGGCCACT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCATTTCTG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCATTTCTG
XM_005263522.1      ATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCATTTCTG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAGAAAGAT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      TCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAGAAAGAT
XM_005263522.1      TCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAGAAAGAT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTAC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ---------------------------------------------ATGAGGGTATTCTAC
XM_005263523.1      GTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTAC
XM_005263522.1      GTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTATTCTAC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCAGCTGCA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCAGCTGCA
XM_005263523.1      GCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCAGCTGCA
XM_005263522.1      GCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCT---GCA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAAGACAGA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAAGACAGA
XM_005263523.1      CGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAAGACAGA
XM_005263522.1      CGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAAGACAGA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCAC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      AAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCAC
XM_005263523.1      AAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCAC
XM_005263522.1      AAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTACATCAC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCTGCCCAGCCAGAATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGATTCAC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CCTGCCCAGCCAGAATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGATTCAC
XM_005263523.1      CCTGCCCAGCCAGAATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGATTCAC
XM_005263522.1      CCTGCCCAGCCAGAATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAAGATTCAC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCACACACACC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      TCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCACACACACC
XM_005263523.1      TCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCACACACACC
XM_005263522.1      TCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCACACACACC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTACCTACCT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTACCTACCT
XM_005263523.1      CCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTACCTACCT
XM_005263522.1      CCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTACCTACCT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTCTCTGATG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTCTCTGATG
XM_005263523.1      CAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTCTCTGATG
XM_005263522.1      CAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTCTCTGATG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GTTGCCATACACCAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACATTCTCCC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GTTGCCATACACCAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACATTCTCCC
XM_005263523.1      GTTGCCATACACCAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACATTCTCCC
XM_005263522.1      GTTGCCATACACCAAAAAGTTTTGAAGTATGCAGGGCATCCTCCCTTTGAACATTCTCCC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ATTCGATTTTGTACTCAAAACGGAGACTACATCATACTGGATTCCAGTTGGTCCAGCTTT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ATTCGATTTTGTACTCAAAACGGAGACTACATCATACTGGATTCCAGTTGGTCCAGCTTT
XM_005263523.1      ATTCGATTTTGTACTCAAAACGGAGACTACATCATACTGGATTCCAGTTGGTCCAGCTTT
XM_005263522.1      ATTCGATTTTGTACTCAAAACGGAGACTACATCATACTGGATTCCAGTTGGTCCAGCTTT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GTGAATCCCTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAGC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GTGAATCCCTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAGC
XM_005263523.1      GTGAATCCCTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAGC
XM_005263522.1      GTGAATCCCTGGAGCCGGAAGATTTCTTTCATCATTGGTCGGCATAAAGTTCGAACGAGC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCACTAAATGAGGATGTTTTTGCTACCAAAATTAAAAAGATGAACGATAATGACAAAGAC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CCACTAAATGAGGATGTTTTTGCTACCAAAATTAAAAAGATGAACGATAATGACAAAGAC
XM_005263523.1      CCACTAAATGAGGATGTTTTTGCTACCAAAATTAAAAAGATGAACGATAATGACAAAGAC
XM_005263522.1      CCACTAAATGAGGATGTTTTTGCTACCAAAATTAAAAAGATGAACGATAATGACAAAGAC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ATAACAGAATTACAAGAACAAATTTACAAACTTCTCTTACAGCCAGTTCACGTGAGCGTG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      ATAACAGAATTACAAGAACAAATTTACAAACTTCTCTTACAGCCAGTTCACGTGAGCGTG
XM_005263523.1      ATAACAGAATTACAAGAACAAATTTACAAACTTCTCTTACAGCCAGTTCACGTGAGCGTG
XM_005263522.1      ATAACAGAATTACAAGAACAAATTTACAAACTTCTCTTACAGCCAGTTCACGTGAGCGTG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCCAGCGGCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGCC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      TCCAGCGGCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGCC
XM_005263523.1      TCCAGCGGCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGCC
XM_005263522.1      TCCAGCGGCTACGGGAGCCTGGGGAGCAGCGGGTCGCAGGAGCAGCTTGTCAGCATCGCC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTTG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      TCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTTG
XM_005263523.1      TCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTTG
XM_005263522.1      TCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGAGACGAAGGCGGAGCAGATGACCTTG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CAGCAGGTCTATGCCAGTGTGAACAAAATTAAAAATCTGGGTCAGCAGCTCTACATTGAG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CAGCAGGTCTATGCCAGTGTGAACAAAATTAAAAATCTGGGTCAGCAGCTCTACATTGAG
XM_005263523.1      CAGCAGGTCTATGCCAGTGTGAACAAAATTAAAAATCTGGGTCAGCAGCTCTACATTGAG
XM_005263522.1      CAGCAGGTCTATGCCAGTGTGAACAAAATTAAAAATCTGGGTCAGCAGCTCTACATTGAG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      TCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGT
XM_005263523.1      TCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGT
XM_005263522.1      TCAATGACCAAATCATCATTCAAGCCAGTGACGGGGACACGCACAGAACCGAATGGTGGT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GGTGAGTCAGCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTG
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GGTGAGTCAGCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTG
XM_005263523.1      G---------------------GTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTG
XM_005263522.1      GGTGAGTCAGCGAATGGTGGTGGTGAATGTAAGACCTTTACTTCCTTCCACCAAACACTG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      AAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCA
XM_005263523.1      AAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCA
XM_005263522.1      AAAAACAATAGTGTGTACACTGAGCCCTGTGAGGATTTGAGGAACGATGAGCACAGCCCA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTGAAGAGCTACAACATT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      TCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTGAAGAGCTACAACATT
XM_005263523.1      TCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTGAAGAGCTACAACATT
XM_005263522.1      TCCTATCAACAGATCAACTGTATCGACAGTGTCATCAGATACCTGAAGAGCTACAACATT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCCTCCTCAGAAGAA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCCTCCTCAGAAGAA
XM_005263523.1      CCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCCTCCTCAGAAGAA
XM_005263522.1      CCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAATACAACTTCTTCCTCCTCAGAAGAA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCCA
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCCA
XM_005263523.1      GACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCCA
XM_005263522.1      GACAAACAGAACCACAAGGCAGATGATGTCCAAGCCTTACAAGCTGGTTTGCAAATCCCA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GCCATACCTAAATCAGAAATGCCAACAAATGGACGGTCCATAGACACAGGAGGAGGAGCT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      GCCATACCTAAATCAGAAATGCCAACAAATGGACGGTCCATAGACACAGGAGGAGGAGCT
XM_005263523.1      GCCATACCTAAATCAGAAATGCCAACAAATGGACGGTCCATAGACACAGGAGGAGGAGCT
XM_005263522.1      GCCATACCTAAATCAGAAATGCCAACAAATGGACGGTCCATAGACACAGGAGGAGGAGCT
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTTAC
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      CCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTTAC
XM_005263523.1      CCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTTAC
XM_005263522.1      CCACAGATCCTGTCCACGGCGATGCTGAGCTTGGGGTCGGGCATAAGCCAATGCGGTTAC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCAGGGATGCTACCCTCTTCTGT
XM_005263524.1      ------------------------------------------------------------
XM_005263529.1      AGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCAGGGATGCTACCCTCTTCTGT
XM_005263523.1      AGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCAGGGATGCTACCCTCTTCTGT
XM_005263522.1      AGCAGCACCATTGTCCATGTCCCACCCCCAGAGACAGCCAGGGATGCTACCCTCTTCTGT
                                                                                

HsCD00438145        ------ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCC
XM_005263521.1      GAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTG
XM_005263524.1      ------ATGCCCCGCGGGGAAGCTCCTGGCCCCGGGAGACGGGGGGCTAAGGACGAGGCC
XM_005263529.1      GAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTG
XM_005263523.1      GAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTG
XM_005263522.1      GAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTTGACCTCGGAAGAATTTAAACACGTG
                          : *.***  .. .:. . **:* ***   ** .  **..*.::: .*. * *  

HsCD00438145        CTGGGCGAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCG
XM_005263521.1      GGGCTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAATTATGTTGAT
XM_005263524.1      CTGGGCGAAGAATCGGGGGAGCGGTGGAGCCCCGAGTTCCATCTGCAGAGGAAATTGGCG
XM_005263529.1      GGGCTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAATTATGTTGAT
XM_005263523.1      GGGCTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAATTATGTTGAT
XM_005263522.1      GGGCTCACAGCGGCTGTTCTGTCAGCGCACACCCAGAAGGAAGAGCAGAATTATGTTGAT
                      *  *..**.. * *   :*  .  *..*.** **::  *: :*****. :*: * *. 

HsCD00438145        GACAGCAGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTT
XM_005263521.1      AAATTCCGAGAAAAGATCCTGTCATCACCCTACAGCTCCTATCTTCAGCAAGAAAGCAGG
XM_005263524.1      GACAGCAGCCACAGTGAACAGCAAGATCGAAACAGAGTTTCTGAAGAACTTATCATGGTT
XM_005263529.1      AAATTCCGAGAAAAGATCCTGTCATCACCCTACAGCTCCTATCTTCAGCAAGAAAGCAGG
XM_005263523.1      AAATTCCGAGAAAAGATCCTGTCATCACCCTACAGCTCCTATCTTCAGCAAGAAAGCAGG
XM_005263522.1      AAATTCCGAGAAAAGATCCTGTCATCACCCTACAGCTCCTATCTTCAGCAAGAAAGCAGG
                    .*.: *.*. *.*. .:.*:* .* .:* .:****.   *.* :: *.*::.:.*  .  

HsCD00438145        GTCCAAGAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGAT
XM_005263521.1      AGCAAAGCTAAATATTCATATTTTCAAGGAGATTCTACTTCCAAGCAGACGCGGTCGGCC
XM_005263524.1      GTCCAAGAAATGAAAAAATACTTCCCCTCGGAGAGACGCAATAAACCAAGCACTCTAGAT
XM_005263529.1      AGCAAAGCTAAATATTCATATTTTCAAGGAGATTCTACTTCCAAGCAGACGCGGTCGGCC
XM_005263523.1      AGCAAAGCTAAATATTCATATTTTCAAGGAGATTCTACTTCCAAGCAGACGCGGTCGGCC
XM_005263522.1      AGCAAAGCTAAATATTCATATTTTCAAGGAGATTCTACTTCCAAGCAGACGCGGTCGGCC
                    . *.***.:*:.:*::.*** ** *..  .** : :.  :. **.*..*  .    .*. 

HsCD00438145        GCCCTCAACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAG
XM_005263521.1      GGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGC
XM_005263524.1      GCCCTCAACTATGCTCTCCGCTGTGTCCACAGCGTTCAAGCAAACAGTGAGTTTTTCCAG
XM_005263529.1      GGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGC
XM_005263523.1      GGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGC
XM_005263522.1      GGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCTGCCGGAGCCGCCAGACAGCAGCAGC
                    * *  **. :*:*  .: *.*:.    .* *.  * *..*.... . :** :  : *.. 

HsCD00438145        ATTCTCAGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTG
XM_005263521.1      TCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC
XM_005263524.1      ATTCTCAGTCAGAATGGAGCACCTCAGGCAGATGTGAGCATGTACAGTCTTGAGGAGCTG
XM_005263529.1      TCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC
XM_005263523.1      TCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC
XM_005263522.1      TCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCATCAGAACGCACAGCCCTGCTGCCCC
                    :  .:**   . :.***: *.*  ..** **.  : .. *:  .... *   .  . *  

HsCD00438145        GCCACTATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCA
XM_005263521.1      TCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCC
XM_005263524.1      GCCACTATCGCTTCAGAACACACTTCCAAAAACACAGATACCTTTGTGGCAGTATTTTCA
XM_005263529.1      TCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCC
XM_005263523.1      TCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCC
XM_005263522.1      TCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGACCTTCCCACCTGCCGCCATGGTGCCC
                     **.* . * * **: ..***** ** *.... **. : .*.  **  **..*. *  *.

HsCD00438145        TTTCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAG
XM_005263521.1      AGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCTCCCAGCCGCGACCTCACCCGGAAGA
XM_005263524.1      TTTCTGTCTGGAAGGTTAGTGCACATTTCTGAACAGGCTGCTTTGATCCTGAATCGTAAG
XM_005263529.1      AGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCTCCCAGCCGCGACCTCACCCGGAAGA
XM_005263523.1      AGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCTCCCAGCCGCGACCTCACCCGGAAGA
XM_005263522.1      AGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCTCCCAGCCGCGACCTCACCCGGAAGA
                    :  *:* *   ::.  *.** *... ** * ..*:  *:**   ** *  ...  *:*..

HsCD00438145        AAAGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTA
XM_005263521.1      GAATACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTCCGAGGGC
XM_005263524.1      AAAGATGTCCTGGCGTCTTCTCACTTTGTTGACCTGCTTGCACCTCAAGACATGAGGGTA
XM_005263529.1      GAATACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTCCGAGGGC
XM_005263523.1      GAATACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTCCGAGGGC
XM_005263522.1      GAATACGCAGCCCCCGGAACTGCACCGGAAGGCCTGCATGGGCTGCCCTTGTCCGAGGGC
                    .** * * .    *   ::** ..   *::*.*****:** .*  *.. : :  ..** .

HsCD00438145        TTCTACGCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCT
XM_005263521.1      TTGCAGCCTTACCCAGCTTTCCCTTTTCCTTACTTGGATACTTTTATGACCGTTTTCCTG
XM_005263524.1      TTCTACGCGCACACTGCCAGAGCTCAGCTTCCTTTCTGGAACAACTGGACCCAAAGAGCA
XM_005263529.1      TTGCAGCCTTACCCAGCTTTCCCTTTTCCTTACTTGGATACTTTTATGACCGTTTTCCTG
XM_005263523.1      TTGCAGCCTTACCCAGCTTTCCCTTTTCCTTACTTGGATACTTTTATGACCGTTTTCCTG
XM_005263522.1      TTGCAGCCTTACCCAGCTTTCCCTTTTCCTTACTTGGATACTTTTATGACCGTTTTCCTG
                    **  *  *  **.*:** : . ** : * * . **  . *. :: : **** ::: .   

HsCD00438145        ---GCACGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAA
XM_005263521.1      CCTGACCCCCCTGTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG
XM_005263524.1      GCTGCACGGTATGAATGTGCTCCGGTGAAACCTTTTTTCTGCAGGATCCGTGGAGGTGAA
XM_005263529.1      CCTGACCCCCCTGTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG
XM_005263523.1      CCTGACCCCCCTGTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG
XM_005263522.1      CCTGACCCCCCTGTCTGTCCTCTGTTGTCGCCATCGTTTTTGCCATGTCCATTCCTGGGG
                       *..*   .**:.*** *** * **:..**:*  ** *  . .:  * :  .   *..

HsCD00438145        GACAGAAAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTA
XM_005263521.1      GCGACAGCCTCTTCTGCGATATCACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGGAC
XM_005263524.1      GACAGAAAGCAAGAGAAGTGTCACTCCCCATTCCGGATCATCCCCTATCTGATTCATGTA
XM_005263529.1      GCGACAGCCTCTTCTGCGATATCACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGGAC
XM_005263523.1      GCGACAGCCTCTTCTGCGATATCACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGGAC
XM_005263522.1      GCGACAGCCTCTTCTGCGATATCACCCTCAATGTCGTCAGCAATGAGTCCAACTCTGGAC
                    *. * *..  .: . ..*: : .. ** **:*   *: .. ..  :.** .* **: *:.

HsCD00438145        CATCACCCTGCCCAGCCAG-----------------------------------------
XM_005263521.1      CCACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGAAAAGTGGGAGGCACAAAGCGAG
XM_005263524.1      CATCACCCTGCCCAGCCAG-----------------------------------------
XM_005263529.1      CCACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGAAAAGTGGGAGGCACAAAGCGAG
XM_005263523.1      CCACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGAAAAGTGGGAGGCACAAAGCGAG
XM_005263522.1      CCACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGAGGAAAAGTGGGAGGCACAAAGCGAG
                    *.:*.**** *. : .*..                                         

HsCD00438145        --------------------AATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAA
XM_005263521.1      GGGCACCCGTTCATTACTTCGAGAAGCAGCTCACCCTTGCAGTTAAACTTACTTCAGGAA
XM_005263524.1      --------------------AATTGGAATCGGAACCTTGCTGTCTCACTGTGGTTGAAAA
XM_005263529.1      GGGCACCCGTTCATTACTTCGAGAAGCAGCTCACCCTTGCAGTTAAACTTACTTCAGGAA
XM_005263523.1      GGGCACCCGTTCATTACTTCGAGAAGCAGCTCACCCTTGCAGTTAAACTTACTTCAGGAA
XM_005263522.1      GGGCACCCGTTCATTACTTCGAGAAGCAGCTCACCCTTGCAGTTAAACTTACTTCAGGAA
                                        .* :.*.* *  *.******:** :.*** :  * ...**

HsCD00438145        GATTCACTCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCAC
XM_005263521.1      GAGATGCCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGGAACACGTGCCCACAAACT
XM_005263524.1      GATTCACTCTGGTTATGAAGCTCCTCGGATCCCAGTGAATAAAAGAATCTTCACCACCAC
XM_005263529.1      GAGATGCCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGGAACACGTGCCCACAAACT
XM_005263523.1      GAGATGCCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGGAACACGTGCCCACAAACT
XM_005263522.1      GAGATGCCCAGACCCTCTGAATCTCCAGATCAGATGAGAAGGAACACGTGCCCACAAACT
                    ** : .* *:*.  .* :...**  *.****. *  ..*:..** *.    *..**... 

HsCD00438145        ACACACCCCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTA
XM_005263521.1      GAGTATTG---TGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGCA
XM_005263524.1      ACACACCCCAGGGTGTGTTTTTCTTGAAGTAGATGAAAAAGCAGTGCCTTTGCTGGGTTA
XM_005263529.1      GAGTATCAGTGTGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGCA
XM_005263523.1      GAGTATCAGTGTGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGCA
XM_005263522.1      GAGTATCAGTGTGTTACAGGCAACAATGGCAGTGAGAGCAGTCCTGCTACTACCGGTGCA
                    ... *       ** : :   :. :.:.* **: ..*..** . *** : *.* **   *

HsCD00438145        CCTACCTCAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTC
XM_005263521.1      CTGTCCACGGGGTCACCTCCCAGGGAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCC
XM_005263524.1      CCTACCTCAGGACCTGATTGGAACATCGATCCTAAGCTACCTGCACCCTGAAGATCGTTC
XM_005263529.1      CTGTCCACGGGGTCACCTCCCAGGGAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCC
XM_005263523.1      CTGTCCACGGGGTCACCTCCCAGGGAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCC
XM_005263522.1      CTGTCCACGGGGTCACCTCCCAGGGAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCC
                    *  :**:*.**. *: .*   *. .: .****::. *::***.*: **:*.. :  ** *

HsCD00438145        TCTG------------------ATGGTTGCCATACACCAAAAAGTTTTGAAGTATGCAGG
XM_005263521.1      ACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCCACAGGA
XM_005263524.1      TCTG------------------ATGGTTGCCATACACCAAAAAGTTTTGAAGTATGCAGG
XM_005263529.1      ACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCCACAGGA
XM_005263523.1      ACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCCACAGGA
XM_005263522.1      ACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCGCTCTGTCCACAGGA
                    :*:*                  **  :* ****.*:.*:...**   * :.  .: ..*.

HsCD00438145        GCATCCTCCCTTTGAACATTCTCCCATTCGATTTTGTACTCAAAACGGAGACTACATCAT
XM_005263521.1      TCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCACACTGTCCATGGGATTGCCT
XM_005263524.1      GCATCCTCCCTTTGAACATTCTCCCATTCGATTTTGTACTCAAAACGGAGACTACATCAT
XM_005263529.1      TCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCACACTGTCCATGGGATTGCCT
XM_005263523.1      TCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCACACTGTCCATGGGATTGCCT
XM_005263522.1      TCGCCTCCCATGAAGAATCCATCCCATCCTACTGCCAGCACACTGTCCATGGGATTGCCT
                     *. *  **.* :..*.:  .****** * * *   :.*:**.:.   * .  * : *.*

HsCD00438145        ACTGGATTCCAGTTGGTCCAGCTTTGTGAATCCCTGGAGCCGGAAGATTTCTTTCATCAT
XM_005263521.1      CCCAGCAGGACTCCATCCCATCCTACTGCCACTGTTCTGTCCACGGGGTCACCTCCCAGC
XM_005263524.1      ACTGGATTCCAGTTGGTCCAGCTTTGTGAATCCCTGGAGCCGGAAGATTTCTTTCATCAT
XM_005263529.1      CCCAGCAGGACTCCATCCCATCCTACTGCCACTGTTCTGTCCACGGGGTCACCTCCCAGC
XM_005263523.1      CCCAGCAGGACTCCATCCCATCCTACTGCCACTGTTCTGTCCACGGGGTCACCTCCCAGC
XM_005263522.1      CCCAGCAGGACTCCATCCCATCCTACTGCCACTGTTCTGTCCACGGGGTCACCTCCCAGC
                    .* .*.:  ..   .  *** * *: **..:*  *  :* * ...*. * .  **. .. 

HsCD00438145        TGGTCGGCATAAAGTTCGAACG--------------------------------------
XM_005263521.1      GAATCCCCATCCAGAACTGGTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATATACCTT
XM_005263524.1      TGGTCGGCATAAAGTTCGAACGAGCCCACTAAATGAGGATGTTTTTGCTACCAAAATTAA
XM_005263529.1      GAATCCCCATCCAGAACTGGTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATATACCTT
XM_005263523.1      GAATCCCCATCCAGAACTGGTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATATACCTT
XM_005263522.1      GAATCCCCATCCAGAACTGGTTCAGCAGCATCAGGAAGCAGCGACAGCAGTATATACCTT
                     ..**  ***..**::* ..                                        

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ACTAGTAGTGTTTATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG
XM_005263524.1      AAAGATGAACGATAATGACAAAGACATAACAGAATTACAAGAACAAATTTACAAACTTCT
XM_005263529.1      ACTAGTAGTGTTTATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG
XM_005263523.1      ACTAGTAGTGTTTATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG
XM_005263522.1      ACTAGTAGTGTTTATTCTTCTAAAATCTCCCAAAATGGGCAGCAATCTCAGGACGTACAG
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AAAAAAGAAACATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACA
XM_005263524.1      CTTACAGCCAGTTCACGTGAGCGTGTCCAGCGGCTACGGGAGCCTGGGGAGCAGCGGGTC
XM_005263529.1      AAAAAAGAAACATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACA
XM_005263523.1      AAAAAAGAAACATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACA
XM_005263522.1      AAAAAAGAAACATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAATGATACGGCAGACA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      CCTGAGCGCATTCTCATGACATACCAGGTACCTGAGAGGGTTAAAGAAGTTGTACTAAAA
XM_005263524.1      GCAGGAGCAGCTTGTCAGCATCGCCTCCTCCAGTGAGGCCAGTGGGCACCGTGTGGAGGA
XM_005263529.1      CCTGAGCGCATTCTCATGACATACCAGGTACCTGAGAGGGTTAAAGAAGTTGTACTAAAA
XM_005263523.1      CCTGAGCGCATTCTCATGACATACCAGGTACCTGAGAGGGTTAAAGAAGTTGTACTAAAA
XM_005263522.1      CCTGAGCGCATTCTCATGACATACCAGGTACCTGAGAGGGTTAAAGAAGTTGTACTAAAA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GAAGACCTGGAAAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTTTTCTCATGGGCAA
XM_005263524.1      GACGAAGGCGGAGCAGATGACCTTGCAGCAGGTCTATGCCAGTGTGAACAAAATTAAAAA
XM_005263529.1      GAAGACCTGGAAAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTTTTCTCATGGGCAA
XM_005263523.1      GAAGACCTGGAAAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTTTTCTCATGGGCAA
XM_005263522.1      GAAGACCTGGAAAAGCTAGAAAGTATGAGGCAGCAGCAGCCCCAGTTTTCTCATGGGCAA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      AAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATC
XM_005263524.1      TCTGGGTCAGCAGCTCTACATTGAGTCAATGACCAAATCATCATTCAAGCCAGTGACGGG
XM_005263529.1      AAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATC
XM_005263523.1      AAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATC
XM_005263522.1      AAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCAAAGCCAGACTGTCACTCAAGAAATC
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      GACATTCAAGAGGCCTGTGTCACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCCACA
XM_005263524.1      GACACGCACAGAACCGAATGGTGGTGGTGAGTCAGCGAATGGTGGTGGTGAATGTAAGAC
XM_005263529.1      GACATTCAAGAGGCCTGTGTCACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCCACA
XM_005263523.1      GACATTCAAGAGGCCTGTGTCACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCCACA
XM_005263522.1      GACATTCAAGAGGCCTGTGTCACTTGTGAAAATGAAGATTCAGCTGATGGTGCGGCCACA
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      TCCTGTGGTCAGGTTCTGGTAGAAGACAGCTGTTGA------------------------
XM_005263524.1      CTTTACTTCCTTCCACCAAACACTGAAAAACAATAGTGTGTACACTGAGCCCTGTGAGGA
XM_005263529.1      TCCTGTGGTCAGGTTCTGGTAGAAGACAGCTGTTGA------------------------
XM_005263523.1      TCCTGTGGTCAGGTTCTGGTAGAAGACAGCTGTTGA------------------------
XM_005263522.1      TCCTGTGGTCAGGTTCTGGTAGAAGACAGCTGTTGA------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TTTGAGGAACGATGAGCACAGCCCATCCTATCAACAGATCAACTGTATCGACAGTGTCAT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CAGATACCTGAAGAGCTACAACATTCCAGCTTTGAAAAGAAAGTGTATCTCCTGTACAAA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TACAACTTCTTCCTCCTCAGAAGAAGACAAACAGAACCACAAGGCAGATGATGTCCAAGC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CTTACAAGCTGGTTTGCAAATCCCAGCCATACCTAAATCAGAAATGCCAACAAATGGACG
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GTCCATAGACACAGGAGGAGGAGCTCCACAGATCCTGTCCACGGCGATGCTGAGCTTGGG
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GTCGGGCATAAGCCAATGCGGTTACAGCAGCACCATTGTCCATGTCCCACCCCCAGAGAC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      AGCCAGGGATGCTACCCTCTTCTGTGAGCCCTGGACCCTGAACATGCAGCCAGCCCCTTT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GACCTCGGAAGAATTTAAACACGTGGGGCTCACAGCGGCTGTTCTGTCAGCGCACACCCA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GAAGGAAGAGCAGAATTATGTTGATAAATTCCGAGAAAAGATCCTGTCATCACCCTACAG
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CTCCTATCTTCAGCAAGAAAGCAGGAGCAAAGCTAAATATTCATATTTTCAAGGAGATTC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TACTTCCAAGCAGACGCGGTCGGCCGGCTGCAGGAAAGGGAAGCACAAGCGGAAGAAGCT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GCCGGAGCCGCCAGACAGCAGCAGCTCGAACACCGGCTCTGGTCCCCGCAGGGGAGCGCA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TCAGAACGCACAGCCCTGCTGCCCCTCCGCGGCCTCCTCTCCGCACACCTCGAGCCCGAC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CTTCCCACCTGCCGCCATGGTGCCCAGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CCCAGCCGCGACCTCACCCGGAAGAGAATACGCAGCCCCCGGAACTGCACCGGAAGGCCT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GCATGGGCTGCCCTTGTCCGAGGGCTTGCAGCCTTACCCAGCTTTCCCTTTTCCTTACTT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GGATACTTTTATGACCGTTTTCCTGCCTGACCCCCCTGTCTGTCCTCTGTTGTCGCCATC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GTTTTTGCCATGTCCATTCCTGGGGGCGACAGCCTCTTCTGCGATATCACCCTCAATGTC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GTCAGCAATGAGTCCAACTCTGGACCCACCCCCTTCAGTCACCAGCCAAAGGAGAGAGGA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GGAAAAGTGGGAGGCACAAAGCGAGGGGCACCCGTTCATTACTTCGAGAAGCAGCTCACC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CTTGCAGTTAAACTTACTTCAGGAAGAGATGCCCAGACCCTCTGAATCTCCAGATCAGAT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GAGAAGGAACACGTGCCCACAAACTGAGTATCAGTGTGTTACAGGCAACAATGGCAGTGA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GAGCAGTCCTGCTACTACCGGTGCACTGTCCACGGGGTCACCTCCCAGGGAGAATCCATC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CCATCCTACTGCCAGCGCTCTGTCCACAGGATCGCCTCCCATGAAGAATCCATCCCATCC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TACTGCCAGCGCTCTGTCCACAGGATCGCCTCCCATGAAGAATCCATCCCATCCTACTGC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CAGCACACTGTCCATGGGATTGCCTCCCAGCAGGACTCCATCCCATCCTACTGCCACTGT
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TCTGTCCACGGGGTCACCTCCCAGCGAATCCCCATCCAGAACTGGTTCAGCAGCATCAGG
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      AAGCAGCGACAGCAGTATATACCTTACTAGTAGTGTTTATTCTTCTAAAATCTCCCAAAA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      TGGGCAGCAATCTCAGGACGTACAGAAAAAAGAAACATTTCCTAATGTCGCCGAAGAGCC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      CATCTGGAGAATGATACGGCAGACACCTGAGCGCATTCTCATGACATACCAGGTACCTGA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GAGGGTTAAAGAAGTTGTACTAAAAGAAGACCTGGAAAAGCTAGAAAGTATGAGGCAGCA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      GCAGCCCCAGTTTTCTCATGGGCAAAAGGAGGAGCTGGCTAAGGTGTATAATTGGATTCA
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        ------------------------------------------------------------
XM_005263521.1      ------------------------------------------------------------
XM_005263524.1      AAGCCAGACTGTCACTCAAGAAATCGACATTCAAGTGACATTGACATCAAGTAACTCGCC
XM_005263529.1      ------------------------------------------------------------
XM_005263523.1      ------------------------------------------------------------
XM_005263522.1      ------------------------------------------------------------
                                                                                

HsCD00438145        -------------------------------------
XM_005263521.1      -------------------------------------
XM_005263524.1      TGCTTTGTTCTTTTTTGGAGGCCTGTGTCACTTGTGA
XM_005263529.1      -------------------------------------
XM_005263523.1      -------------------------------------
XM_005263522.1      -------------------------------------
                                                         

Pathways

Panther : Circadian clock system

Protein

SMART domain : PAS : PAS domain
HPRD : 09138

Clone

Original Clone ID : ccsbBroad304_11314

Organism


TAX_ID : 9606
Species Specific ID: 8863

Genome

Chromosome : 1
Map Location : 1p36.23
Ensembl : ENSG00000049246

Reagents

Labome : PER3-antibody