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RANGAP1 (Homo sapiens) in pLX304 (Gateway V5-tagged lentiviral expression vector)

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Explanation of Terms


Gene: Gene Symbol:  RANGAP1
Gene Name:  Ran GTPase activating protein 1
Sequence             
Original Clone ID: ccsbBroad304_06839
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLX304               Format:  FUSION
Source: The ORFeome Collaboration
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors: The ORFeome Collaboration
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
Harvard Medical School
HsCD00445061

Price:  Login for Pricing
AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1762nts         Open reading frame : 1 to 1762
Reference Sequence Alignment

ATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGG
GGACAGCTGAGTTTCAAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGAT
GTGATTAAAGAGATTGAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACA
GTGGGCGTGGAAGCAGCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAG
CGCTGCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTG
ATCTCACTAGGGGAAGGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGC
GACAACGCATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCC
TGCTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAG
ATCCTGGCTGCAGCTCTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTG
GCCCTGAAGGTCTTTGTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTG
GCAGAAGCTTTTAGGGTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATC
AACCACCCTGGCATCACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTC
ATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTG
AAGACCTTGCGGCAGGTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGT
GCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTG
TCATTCTGTGAAATCAAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAA
GCTGAGCTGGAGAAGCTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAG
CTTCAGGAGGTGCTGGAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGAC
GAGGACGAGGAGGAGGAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAG
GAGGAAGATGAGGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAG
CGAGGGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGG
GAGCCAGCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTT
CCCTCTCCAGAGAAGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAG
ACTGACACGTCTGACCCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTC
AAGGACGAAGCTACTGTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAG
GCTTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCTCACCAGGCTCCTCGTGCACATG
GGTCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATG
GCGCTGAACCACATGGTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTG
GCGTTCGTGACCAAGCCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTG
CTGCAGACGCTGTACAAGGTC


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

         Powered by LabGenius

Vector Name: pLX304

pLX304 in advanced viewed

Synonyms: None
Sequencing Primer: Forward:  CMV forward
Reverse:  Unknown
Description: Gateway compatible lentiviral vector with a C-terminal V5 tag and CMV promoter for mammalian cell expression; blasticidin resistance in mammalian cells; ampicillin resistance in bacteria; Gateway cloning.
Comments: None
Size (bp): 9377
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, recombinational cloning, with tag/fusion/marker
Author Name: David Root
Publications: PMID: 21706014
Title: A public genome-scale lentiviral expression library of human ORFs

Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
polypurine tract cPPT human immunodeficiency virus type 1 central polypurine tract 3027 3042
promoter T7 T7 promoter 3690 3672
promoter CMV CMV promoter 14 566
recombination site attR1 595 719
recombination site attR2 2282 2297
selectable marker CAT CAT/CamR Chloramphenical resistance 828 1487
selectable marker ccdB Control of cell death B gene 1829 2134
selectable marker AmpR Ampicillin resistance gene 4444 5304
selectable marker BlastR Blasticidin resistance gene 8753 9148
tag V5 C-terminal V5 tag 2301 2342
trxn regulatory element WPRE woodchuck hepatitis post-transcriptional regulatory element 2386 2961

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : RANGAP1
Symbol Nomenclature : RANGAP1
SYNONYM : Fug1; RANGAP; SD
Designation : ran GTPase-activating protein 1|segregation distorter homolog|segregation distortion
Full Nomenclature : Ran GTPase activating protein 1
GENEID : 5905
Locus Tag : RP4-756G23.7
HGNC : 9854
MIM : 602362
Vega : OTTHUMG00000150940
Target GenBank: None

 

Reference Sequence Alignment

  

HsCD00445061        ------------------------------------------------------------
NM_002883.3         ------------------------------------------------------------
XM_005261695.1      ATGGGGCTCCTGCGCCGCCCGCCTATCATTTGCGGCCTGTATTCGCGCGTCGCTCCCGCA
XM_005261696.1      ------------------------------------------ATGAATGATCTGGATCCC
NM_001278651.1      ------------------------------------------------------------
                                                                                

HsCD00445061        ------------------------------------------------------------
NM_002883.3         ------------------------------------------------------------
XM_005261695.1      GAGCCACCTCCCAGCAGGCCCACGCCCGCGGGGGCCCCGGGCTGGCGCCGCTGTCCCTGG
XM_005261696.1      ATAGCCATCTGTGTCCTGTTTGAGGAATGGGACCCTCAAACAGAGAACAGCCAAGATGCT
NM_001278651.1      ------------------------------------------------------------
                                                                                

HsCD00445061        ---------------------------------------------ATGGCCTCGGAAGAC
NM_002883.3         ---------------------------------------------ATGGCCTCGGAAGAC
XM_005261695.1      AATCGATTCTGCAGATCTCCAGGGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGAC
XM_005261696.1      CAAGCAGTCTGCAGATCTCCAGGGGAGCCCACCAGCCTAGTCAACATGGCCTCGGAAGAC
NM_001278651.1      ---------------------------------------------ATGGCCTCGGAAGAC
                                                                 ***************

HsCD00445061        ATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTC
NM_002883.3         ATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTC
XM_005261695.1      ATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTC
XM_005261696.1      ATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTC
NM_001278651.1      ATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGAGTTTC
                    ************************************************************

HsCD00445061        AAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATT
NM_002883.3         AAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATT
XM_005261695.1      AAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATT
XM_005261696.1      AAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATT
NM_001278651.1      AAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATT
                    ************************************************************

HsCD00445061        GAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCA
NM_002883.3         GAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCA
XM_005261695.1      GAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCA
XM_005261696.1      GAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCA
NM_001278651.1      GAAGACTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCA
                    ************************************************************

HsCD00445061        GCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGT
NM_002883.3         GCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGT
XM_005261695.1      GCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGT
XM_005261696.1      GCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGT
NM_001278651.1      GCCAGGGTCATCGCCAAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGT
                    ************************************************************

HsCD00445061        GACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGATCTCACTAGGGGAA
NM_002883.3         GACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGATCTCACTAGGGGAA
XM_005261695.1      GACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGATCTCACTAGGGGAA
XM_005261696.1      GACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGATCTCACTAGGGGAA
NM_001278651.1      GACATGTTCACGGGAAGGCTGCGGACCGAGATCCCACCAGCCCTGATCTCACTAGGGGAA
                    ************************************************************

HsCD00445061        GGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGCGACAACGCATTCGGG
NM_002883.3         GGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGCGACAACGCATTCGGG
XM_005261695.1      GGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGCGACAACGCATTCGGG
XM_005261696.1      GGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGCGACAACGCATTCGGG
NM_001278651.1      GGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCTGGACTTAAGCGACAACGCATTCGGG
                    ************************************************************

HsCD00445061        CCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAG
NM_002883.3         CCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAG
XM_005261695.1      CCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAG
XM_005261696.1      CCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAG
NM_001278651.1      CCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCCTGCTTCACCCTGCAG
                    ************************************************************

HsCD00445061        GAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCT
NM_002883.3         GAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCT
XM_005261695.1      GAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCT
XM_005261696.1      GAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCT
NM_001278651.1      GAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTGCAGCT
                    ************************************************************

HsCD00445061        CTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTT
NM_002883.3         CTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTT
XM_005261695.1      CTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTT
XM_005261696.1      CTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTT
NM_001278651.1      CTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTT
                    ************************************************************

HsCD00445061        GTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGG
NM_002883.3         GTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGG
XM_005261695.1      GTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGG
XM_005261696.1      GTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGG
NM_001278651.1      GTGGCTGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGG
                    ************************************************************

HsCD00445061        GTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATC
NM_002883.3         GTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATC
XM_005261695.1      GTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATC
XM_005261696.1      GTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATC
NM_001278651.1      GTCATCGGGACCCTGGAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATC
                    ************************************************************

HsCD00445061        ACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGAC
NM_002883.3         ACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGAC
XM_005261695.1      ACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGAC
XM_005261696.1      ACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGAC
NM_001278651.1      ACTGCCCTGGCCCAGGCTTTCGCTGTCAACCCCCTGCTGCGGGTCATCAACCTGAATGAC
                    ************************************************************

HsCD00445061        AACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAG
NM_002883.3         AACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAG
XM_005261695.1      AACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAG
XM_005261696.1      AACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAG
NM_001278651.1      AACACCTTCACTGAGAAGGGCGCCGTGGCCATGGCCGAGACCTTGAAGACCTTGCGGCAG
                    ************************************************************

HsCD00445061        GTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCA
NM_002883.3         GTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCA
XM_005261695.1      GTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCA
XM_005261696.1      GTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCA
NM_001278651.1      GTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGTGCAGTTGCCATTGCA
                    ************************************************************

HsCD00445061        GATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTGAAATC
NM_002883.3         GATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTGAAATC
XM_005261695.1      GATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTGAAATC
XM_005261696.1      GATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTGAAATC
NM_001278651.1      GATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTGAAATC
                    ************************************************************

HsCD00445061        AAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAG
NM_002883.3         AAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAG
XM_005261695.1      AAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAG
XM_005261696.1      AAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAG
NM_001278651.1      AAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAG
                    ************************************************************

HsCD00445061        CTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTG
NM_002883.3         CTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTG
XM_005261695.1      CTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTG
XM_005261696.1      CTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTG
NM_001278651.1      CTGGACCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTG
                    ************************************************************

HsCD00445061        GAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAG
NM_002883.3         GAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAG
XM_005261695.1      GAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAG
XM_005261696.1      GAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAG
NM_001278651.1      GAGGGCTTCAACATGGCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAG
                    ************************************************************

HsCD00445061        GAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAA
NM_002883.3         GAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAA
XM_005261695.1      GAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAA
XM_005261696.1      GAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAA
NM_001278651.1      GAGGAGGAAGGAGAAGAGGAAGAAGAGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAA
                    ************************************************************

HsCD00445061        GAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAG
NM_002883.3         GAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAG
XM_005261695.1      GAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAG
XM_005261696.1      GAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAG
NM_001278651.1      GAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGAGCCTCAGCAGCGAGGGCAGGGAGAG
                    ************************************************************

HsCD00445061        AAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGGGAGCCAGCTCCCGTG
NM_002883.3         AAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGGGAGCCAGCTCCCGTG
XM_005261695.1      AAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGGGAGCCAGCTCCCGTG
XM_005261696.1      AAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGGGAGCCAGCTCCCGTG
NM_001278651.1      AAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGGGAGCCAGCTCCCGTG
                    ************************************************************

HsCD00445061        CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAG
NM_002883.3         CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAG
XM_005261695.1      CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAG
XM_005261696.1      CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAG
NM_001278651.1      CTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAGAGAAG
                    ************************************************************

HsCD00445061        CTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGAC
NM_002883.3         CTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGAC
XM_005261695.1      CTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGAC
XM_005261696.1      CTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGAC
NM_001278651.1      CTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGAC
                    ************************************************************

HsCD00445061        CCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACT
NM_002883.3         CCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACT
XM_005261695.1      CCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACT
XM_005261696.1      CCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACT
NM_001278651.1      CCCGAGAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACT
                    ************************************************************

HsCD00445061        GTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCG
NM_002883.3         GTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCG
XM_005261695.1      GTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCG
XM_005261696.1      GTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCG
NM_001278651.1      GTGAGGATGGCAGTGCAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCG
                    ************************************************************

HsCD00445061        TCCTTCAACTCCAACACCTTCCTCACCAGGCTCCTCGTGCACATGGGTCTGCTCAAGAGT
NM_002883.3         TCCTTCAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGT
XM_005261695.1      TCCTTCAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGT
XM_005261696.1      TCCTTCAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGT
NM_001278651.1      TCCTTCAACTCCAACACCTTCCTCACCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGT
                    ******************************** ***************************

HsCD00445061        GAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATG
NM_002883.3         GAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATG
XM_005261695.1      GAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATG
XM_005261696.1      GAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATG
NM_001278651.1      GAAGACAAGGTCAAGGCCATTGCCAACCTGTACGGCCCCCTGATGGCGCTGAACCACATG
                    ************************************************************

HsCD00445061        GTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCAAG
NM_002883.3         GTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCAAG
XM_005261695.1      GTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCAAG
XM_005261696.1      GTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCAAG
NM_001278651.1      GTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTGGCGTTCGTGACCAAG
                    ************************************************************

HsCD00445061        CCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGCTGTAC
NM_002883.3         CCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGCTGTAC
XM_005261695.1      CCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGCTGTAC
XM_005261696.1      CCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGCTGTAC
NM_001278651.1      CCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGCTGTAC
                    ************************************************************

HsCD00445061        AAGGTC---
NM_002883.3         AAGGTCTAG
XM_005261695.1      AAGGTCTAG
XM_005261696.1      AAGGTCTAG
NM_001278651.1      AAGGTCTAG
                    ******   

Pathways

NCI : Signaling events mediated by HDAC Class I
NCI : Signaling events mediated by HDAC Class II
NCI : Sumoylation by RanBP2 regulates transcriptional repression
Reactome : Cell Cycle
Reactome : Cell Cycle, Mitotic
Reactome : Disease
Reactome : HIV Infection
Reactome : HIV Life Cycle
Reactome : Host Interactions of HIV factors
Reactome : Interactions of Rev with host cellular proteins
Reactome : Late Phase of HIV Life Cycle
Reactome : M Phase
Reactome : Mitotic Anaphase
Reactome : Mitotic M-M/G1 phases
Reactome : Mitotic Metaphase and Anaphase
Reactome : Mitotic Prometaphase
Reactome : Resolution of Sister Chromatid Cohesion
Reactome : Rev-mediated nuclear export of HIV RNA
Reactome : Separation of Sister Chromatids

Clone

Original Clone ID : ccsbBroad304_06839

Organism


TAX_ID : 9606
Species Specific ID: 5905

Genome

Chromosome : 22
Map Location : 22q13
Ensembl : ENSG00000100401

Reagents

Labome : RANGAP1-antibody