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ARHGEF9 (Homo sapiens) in pLX304 (Gateway V5-tagged lentiviral expression vector)

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Explanation of Terms


Gene: Gene Symbol:  ARHGEF9
Gene Name:  Cdc42 guanine nucleotide exchange factor (GEF) 9
Sequence             
Original Clone ID: ccsbBroad304_02740
Keyword: None
Species: Homo sapiens
Type: cDNA
Vector Name: pLX304               Format:  FUSION
Source: The ORFeome Collaboration
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors: The ORFeome Collaboration
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
Harvard Medical School
HsCD00446652

Price:  Login for Pricing
AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 1549nts         Open reading frame : 1 to 1549
Reference Sequence Alignment

ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTC
ACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCT
TCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGC
TTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAGGAGGGGCCCAGCGATGTGCAG
AACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAGAACCGG
GACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAG
CACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTC
AGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATG
GGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGATGACCCCCACCTCAGCGAGATA
GGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATTGTAACAAC
CACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTC
TTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTG
ACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACT
GCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCTTTGGCTGTCATGAGAAATGTG
ACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTCAGTGG
CAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATC
TACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTC
TTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTG
TACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGA
GATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAG
GAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTC
AGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAAC
CAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCT
GCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTAC
CTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGC
CAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAA


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

         Powered by LabGenius

Vector Name: pLX304

pLX304 in advanced viewed

Synonyms: None
Sequencing Primer: Forward:  CMV forward
Reverse:  Unknown
Description: Gateway compatible lentiviral vector with a C-terminal V5 tag and CMV promoter for mammalian cell expression; blasticidin resistance in mammalian cells; ampicillin resistance in bacteria; Gateway cloning.
Comments: None
Size (bp): 9377
Parent Vector: None
Empty Vector: None
Properties: Gateway, acceptor (destination), lentiviral infection, recombinational cloning, with tag/fusion/marker
Author Name: David Root
Publications: PMID: 21706014
Title: A public genome-scale lentiviral expression library of human ORFs

Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
polypurine tract cPPT human immunodeficiency virus type 1 central polypurine tract 3027 3042
promoter T7 T7 promoter 3690 3672
promoter CMV CMV promoter 14 566
recombination site attR1 595 719
recombination site attR2 2282 2297
selectable marker CAT CAT/CamR Chloramphenical resistance 828 1487
selectable marker ccdB Control of cell death B gene 1829 2134
selectable marker AmpR Ampicillin resistance gene 4444 5304
selectable marker BlastR Blasticidin resistance gene 8753 9148
tag V5 C-terminal V5 tag 2301 2342
trxn regulatory element WPRE woodchuck hepatitis post-transcriptional regulatory element 2386 2961

 

  • Gene
  • Pathways
  • Protein
  • Clone
  • Organism
  • Genome
  • Reagents

Gene

 

Gene Symbol : ARHGEF9
Symbol Nomenclature : ARHGEF9
SYNONYM : COLLYBISTIN; EIEE8; HPEM-2; PEM-2; PEM2
Designation : PEM-2 homolog|hPEM-2 collybistin|rac/Cdc42 guanine nucleotide exchange factor 9|rho guanine nucleotide exchange factor 9
Full Nomenclature : Cdc42 guanine nucleotide exchange factor (GEF) 9
GENEID : 23229
Locus Tag : RP11-357C3.4
GenBank Accession : HQ258455
HGNC : 14561
MIM : 300429
Vega : OTTHUMG00000021700
Target GenBank: HQ258455

 

Reference Sequence Alignment

  

HsCD00446652        ---------------------ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCT
NM_015185.2         ---------------------ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCT
XM_005262252.1      ------------------------------------------------------------
XM_005262249.1      ATGCAGTGGATAAGGGGCGGATCGGGAATGCTGATCACTGGAGATTCCATCGTTAGTGCT
XM_005262251.1      ------------------------------------------------------------
XM_005262253.1      ATGCAGTGGATAAGGGGCGGATCGGGAATGCTGATCACTGGAGATTCCATCGTTAGTGCT
                                                                                

HsCD00446652        GAGGCAGTATGGGATCACGTCACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
NM_015185.2         GAGGCAGTATGGGATCACGTCACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
XM_005262252.1      ------------------------ATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
XM_005262249.1      GAGGCAGTATGGGATCACGTCACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
XM_005262251.1      ------------------------ATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
XM_005262253.1      GAGGCAGTATGGGATCACGTCACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGAC
                                            ************************************

HsCD00446652        GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
NM_015185.2         GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
XM_005262252.1      GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
XM_005262249.1      GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
XM_005262251.1      GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
XM_005262253.1      GTCATCAAAGTCTTGGATGCTTCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAG
                    ************************************************************

HsCD00446652        GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
NM_015185.2         GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
XM_005262252.1      GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
XM_005262249.1      GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
XM_005262251.1      GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
XM_005262253.1      GAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAG
                    ************************************************************

HsCD00446652        GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
NM_015185.2         GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
XM_005262252.1      GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
XM_005262249.1      GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
XM_005262251.1      GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
XM_005262253.1      GAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTG
                    ************************************************************

HsCD00446652        GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
NM_015185.2         GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
XM_005262252.1      GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
XM_005262249.1      GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
XM_005262251.1      GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
XM_005262253.1      GGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGC
                    ************************************************************

HsCD00446652        ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
NM_015185.2         ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
XM_005262252.1      ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
XM_005262249.1      ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
XM_005262251.1      ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
XM_005262253.1      ACTGAGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGC
                    ************************************************************

HsCD00446652        CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
NM_015185.2         CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
XM_005262252.1      CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
XM_005262249.1      CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
XM_005262251.1      CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
XM_005262253.1      CGGAAGAGAAGGGACATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAA
                    ************************************************************

HsCD00446652        GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
NM_015185.2         GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
XM_005262252.1      GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
XM_005262249.1      GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
XM_005262251.1      GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
XM_005262253.1      GATATCTACAGATTTCAGATGGGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGAT
                    ************************************************************

HsCD00446652        GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
NM_015185.2         GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
XM_005262252.1      GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
XM_005262249.1      GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
XM_005262251.1      GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
XM_005262253.1      GACCCCCACCTCAGCGAGATAGGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATA
                    ************************************************************

HsCD00446652        TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
NM_015185.2         TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
XM_005262252.1      TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
XM_005262249.1      TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
XM_005262251.1      TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
XM_005262253.1      TACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAG
                    ************************************************************

HsCD00446652        GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
NM_015185.2         GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
XM_005262252.1      GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
XM_005262249.1      GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
XM_005262251.1      GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
XM_005262253.1      GACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATT
                    ************************************************************

HsCD00446652        GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
NM_015185.2         GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
XM_005262252.1      GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
XM_005262249.1      GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
XM_005262251.1      GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
XM_005262253.1      GCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTG
                    ************************************************************

HsCD00446652        GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
NM_015185.2         GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
XM_005262252.1      GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
XM_005262249.1      GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
XM_005262251.1      GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
XM_005262253.1      GCTGAGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCT
                    ************************************************************

HsCD00446652        TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
NM_015185.2         TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
XM_005262252.1      TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
XM_005262249.1      TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
XM_005262251.1      TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
XM_005262253.1      TTGGCTGTCATGAGAAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAAT
                    ************************************************************

HsCD00446652        ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTA
NM_015185.2         ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTA
XM_005262252.1      ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTA
XM_005262249.1      ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTA
XM_005262251.1      ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTA
XM_005262253.1      ATTGACAAGATTGCTCAGTGGCAGGCTTCTGTCCTAGACTGGGAGG--------------
                    **********************************************              

HsCD00446652        GACAGGAGCTCGGAGCTGATCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGC
NM_015185.2         GACAGGAGCTCGGAGCTGATCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGC
XM_005262252.1      GACAGGAGCTCGGAGCTGATCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGC
XM_005262249.1      GACAGGAGCTCGGAGCTGATCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGC
XM_005262251.1      GACAGGAGCTCGGAGCTGATCTACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGC
XM_005262253.1      ------------------------------------------------------------
                                                                                

HsCD00446652        CGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGAC
NM_015185.2         CGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGAC
XM_005262252.1      CGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGAC
XM_005262249.1      CGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGAC
XM_005262251.1      CGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGAC
XM_005262253.1      ----------------------------------------------------------AC
                                                                              **

HsCD00446652        CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
NM_015185.2         CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
XM_005262252.1      CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
XM_005262249.1      CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
XM_005262251.1      CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
XM_005262253.1      CTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTA
                    ************************************************************

HsCD00446652        GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
NM_015185.2         GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
XM_005262252.1      GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
XM_005262249.1      GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
XM_005262251.1      GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
XM_005262253.1      GTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAG
                    ************************************************************

HsCD00446652        CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
NM_015185.2         CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
XM_005262252.1      CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
XM_005262249.1      CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
XM_005262251.1      CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
XM_005262253.1      CTTCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAA
                    ************************************************************

HsCD00446652        ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
NM_015185.2         ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
XM_005262252.1      ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
XM_005262249.1      ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
XM_005262251.1      ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
XM_005262253.1      ATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATT
                    ************************************************************

HsCD00446652        GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
NM_015185.2         GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
XM_005262252.1      GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
XM_005262249.1      GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
XM_005262251.1      GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
XM_005262253.1      GGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCT
                    ************************************************************

HsCD00446652        AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
NM_015185.2         AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
XM_005262252.1      AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
XM_005262249.1      AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
XM_005262251.1      AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
XM_005262253.1      AAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGAC
                    ************************************************************

HsCD00446652        CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
NM_015185.2         CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
XM_005262252.1      CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
XM_005262249.1      CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
XM_005262251.1      CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
XM_005262253.1      CCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAG
                    ************************************************************

HsCD00446652        TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
NM_015185.2         TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
XM_005262252.1      TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
XM_005262249.1      TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
XM_005262251.1      TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
XM_005262253.1      TTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCC
                    ************************************************************

HsCD00446652        TTCAAAAAA---
NM_015185.2         TTCAAAAAATGA
XM_005262252.1      TTCAAAAAATGA
XM_005262249.1      TTCAAAAAATGA
XM_005262251.1      TTCAAAAAATGA
XM_005262253.1      TTCAAAAAATGA
                    *********   

Pathways

NCI : Regulation of CDC42 activity
Reactome : Cell death signalling via NRAGE, NRIF and NADE
Reactome : G alpha (12/13) signalling events
Reactome : GABA A receptor activation
Reactome : GABA receptor activation
Reactome : GPCR downstream signaling
Reactome : Ion channel transport
Reactome : Ligand-gated ion channel transport
Reactome : NRAGE signals death through JNK
Reactome : Neuronal System
Reactome : Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
Reactome : Rho GTPase cycle
Reactome : Signal Transduction
Reactome : Signaling by GPCR
Reactome : Signaling by Rho GTPases
Reactome : Signalling by NGF
Reactome : Transmembrane transport of small molecules
Reactome : Transmission across Chemical Synapses
Reactome : p75 NTR receptor-mediated signalling

Clone

Original Clone ID : ccsbBroad304_02740

Organism


TAX_ID : 9606
Species Specific ID: 23229

Genome

Chromosome : X
Map Location : Xq11.1
Ensembl : ENSG00000131089

Reagents

Labome : ARHGEF9-siRNA
Labome : ARHGEF9-antibody