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STM3038 (S. enterica subsp. enterica serovar Typhimurium ) in pSGX3

TOP

Explanation of Terms


Gene: Gene Symbol:  STM3038
Gene Name:  metalloendopeptidase
Sequence             
Original Clone ID: 6175b1BCt1b1
Keyword: full-length cds
Species: Salmonella enterica subsp. enterica serovar Typhimurium
Type: cDNA
Vector Name: pSGX3               Format:  CLOSED
Source: New York SGX Research Center for Structural Genomics
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors: PSI
New York SGX Research Center for Structural Genomics
StCD00533766

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AVAILABLE
No restriction
Special MTA: PSI

 

Insert sequence: 780nts        
Open reading frame : 1 to 780

GTTTTGAGCGCAGGACGCCTGAACAAAAATAGCCTGGGTATTGCGGTGCTGTTATGCACA
GGGCTGCTGCTGGCGGGGTGTTCCAGTAATTCCGGCTCAGGAACGTATTCCGGCTCCGTC
TATACCGTTAAGCGCGGCGATACGTTGTATCGTATATCGCGCGCTACGGGAACCAGCGTG
AAAGAACTGGCCCGACTGAATGGCATTTCTCCGCCTTATACTATTGAGGTGGGGCAGCGA
ATTAAAGTGCGCGGCAGCGCAAAGAGTAGCACTTCAACACGCAAAACCAGCAATAAAACA
GCAACAAAAACTGCTGCGGTCAGACCGTCATCTTCGGTGCCAAAATCCTCCTGGCCGCCG
GTGGGGCAGCGTTGTTGGGTATGGCCTGCTAACGGTAAAGTGATTTTACCTTATTCCACC
GCGGAGGGCGGAAATAAGGGGATCGATATTGCGGGCGCGCGCGGAACGCCTGTTTATGCG
GCGGGAGCGGGTAAAGTTGTCTATGTCGGGAACCAGCTGCGCGGTTACGGCAATCTCATC
ATGATTAAGCACAATGAAGATTACATTACGGCTTACGCTCATAATGACACCATGCTGGTT
AATAATGGACAAAGCGTTAAAGCGGGGCAAAAAATCGCTACGATGGGCAGCACGGATGCC
GCATCCGTAAGACTACACTTCCAGATTCGCTACCGGGCGACGGCCATCGATCCGCTGCGT
TATCTGCCGCCGCAGGGGAGTAAACCGAAGTGCGAAGGGCATCATCACCATCACCACTGA


Coding Sequence Details
Insert Sequence Verified?: Y Verification Method: Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence: None
3' Linker Sequence: None

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition:  50ug/mL kanamycin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results: ProteinPurified: Not_Tested
SolubleProtein: Not_Tested
ProteinExpressed: Protein_Confirmed
Find experimental protocols in NYSGXRC-6175b
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pSGX3

pSGX3 in advanced viewed

Synonyms: pSGX-3, pSGX3_BC
Sequencing Primer: Forward:  T7
Reverse:  T7 terminator
Description: Bacterial (E. coli) expression vector with T7 promoter, adds C-terminal 6xHis tag; kanamycin resistance; TOPO cloning.
Comments: Modified from pET26b from Novagen
Size (bp): 5339
Parent Vector: None
Empty Vector: None
Properties: TOPO Cloning, bacterial expression, in vitro transcription, with tag/fusion/marker
Author Name: New York SGX Research Center for Structural Genomics
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
ATG start start initiation start (Met, Ser, Leu) 5072 5079
TOPO recognition site TOPO TOPO cloning site 5076 5085
bacterial origin ori pBR322-type bacterial origin of replication 1421 2103
gene fragment ROP ROP 2527 2703
promoter T7 T7 promoter 4983 5003
repressor protein gene LacI LacI CDS 3515 4531
selectable marker KanR kanamycin resistance gene 563 1375
tag His 6xHis tag 5086 5103
trxn regulatory element lac operator lac operator 5003 5025
trxn termination sequence T7 term T7 terminator 5231 5307

 

  • Gene
  • Protein
  • Clone
  • Experimental
  • Organism
  • Reagents

Gene

 

Gene Symbol : STM3038
GENEID : 1254561
Locus Tag : STM3038
GI : 16766339
GenBank Accession : NP_461954.1
Target GenBank: None

 

Protein

SMART domain : LysM : Lysin motif
Structural Annotation Wiki : NYSGXRC-6175b

Clone

Cloning Information : 461781
HIP Master Clone ID : 390525
Original Clone ID : 6175b1BCt1b1

Experimental

TargetTrack - Experimental data : NYSGXRC-6175b

Organism


TAX_ID : 99287
Species Specific ID: 1254561

Reagents

Labome : STM3038-cDNA