Gene:
Gene Symbol:
Farp1
Gene Name:
FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
Original Clone ID:
FLH270290.01L
Keyword:
None
Species:
Mus musculus
Type:
cDNA
Vector Name:
pENTR223.1
Format:
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
The ORFeome Collaboration
MmCD00083216
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3144nts
Open reading frame: 1 to 3144
ATGGGAGAAATAGAGCAGAAGCCCACCCCAGCATCACGTCTGGGGGCCCCAGAGAACTCG
GGGATCAGCACCTTGGAACGAGGACAGAAACCACCGCCCACACCTTCAGGAAAACTTATG
ACTGTCAAAATTCAGATGCTGGACGACACCCAGGAGGCCTTTGAAGTTCCACAACGAGCG
CCAGGGAAGGTTCTGTTTGACGCCGTGTGCAACCACCTCAACCTTGTGGAGGGCGACTAC
TTCGGCCTGGAGTTCCCTGACCACAGGAAGATCGTGGTGTGGCTGGATCTCCTGAAGCCC
ATTGTGAAGCAGATTCGAAGACCGAAGCACGTCGTTGTTAAATTTGTTGTGAAATTCTTC
CCTCCCGACCACACACAGCTCCAGGAAGAACTTACCAGGTACCTGTTCGCTCTGCAGGTG
AAGCAGGACTTGGCTCAAGGCAGGCTGACGTGTAACGACACCAGTGCCGCTCTCTTGATC
TCACACATTGTACAGTCGGAGATTGGGGATTTCGATGAAGCTTTGGACAGAGAACACTTA
GCAAAAAATAAGTACGTACCTCAACAGGATGCGCTGGAAGACAGAATCATGGAGTTCCAC
CACAGCCACGTTGGACAAACCCCGGCAGAGTCAGATTTCCAGCTCCTAGAGGTGGCCCGT
CGGCTAGAGATGTACGGAATCCGGTTACACCCTGCCAAGGACAGGGAAGGCACCAAGATC
AACCTGGCTGTCGCCAACACTGGAATTCTAGTGTTTCAGGGCTTCACGAAGATCAATGCT
TTTAACTGGGCCAAGGTGCGGAAGCTGAGCTTCAAGCGGAAGCGCTTTCTTATCAAGCTC
AGACCTGACGTGAATAGCTCATACCAGGACACCTTGGAGTTCCTGATGGCCGGCCGAGAC
TTCTGCAAGTCTTTCTGGAAAATATGTGTGGAGCACCATGCCTTCTTCAGACTCTTCGAA
GAACCTAAGCCAAAGCCAAAGCCTGTTCTCTTCAGCCGAGGGTCGTCCTTCCGGTTTAGT
GGTCGGACTCAGAAGCAAGTTCTTGATTATGTTAAAGAAGGCGGCCACAAGAAGGTGCAG
TTTGAAAGAAAGCACAGCAAGATCCACTCCACCAGGAGCCTGGTCTCACAGCCCACAGCA
CCGAATTCAGAAGTGCCAAAACAGTCTCCACAGAGCGCAAGCCTTACGTTTGGAGAAGGT
ACCGAGTCTCCGGGTGGCCAGAGCTGCCAGCAAGCGAAGGAAACAAAAGCCTGTACCTTG
GAGTTGGGACCTCACCAAAGCCCCGCCCTCCCTAAGAGCCCTCCAGGGAGCAAAGCTGCA
GATGGAACCACCGTGGTGCCGCCTGAGGAAGAAGAGGAGGAAGAGGGTGGCAAGGACGGC
ATCCGGCCAAGTAACCCTCAGCCCCCGCAGCCAAGCACAGGCTCCCTGACTGGTAGCCCT
CACCTTTCAGAGCTGTCCATCAACTCACAGGGAGGAGCCGCCCCAGCCAACGTGACCCTG
TCTCCCAACCTGAGTCCTGACAACAAGCAGGCCTCTCCCCTGATCAGCCCGCTCCTGAAC
GACCAAGCGTGCCCAAGGACCGACGACGAAGAAGAGGGCCGGCGAAAGAGATTCCCAACC
GACAAGGCGTACTACATTGCTAAGGAAGTCTCCACCACAGAGCGCACGTACCTGAAGGAC
CTTGAGGTCATTGCTTCGTGGTTTCAGAGCACAGTCAGCAAAGAGGACTCCATGCCCGAA
GCCTTGAAGAGTCTCATATTCCCAAATTTTGAACCTTTGCACAAGTTCCATACCAATTTT
CTGAAGGAAATTGAGCAACGACTTGCCCTGTGGGAAGGCCGCTCAAATGCCCACGTCAGA
GGAGATTACCAAAGAATCGGGGACGTCATGCTGAAAAACATTCAGGGCATGAAGCACCTG
GCGGCCCACCTGTGGAAGCACAGTGAGGCCCTGGAGGCCCTGGAGACCTCCATCAAGGGC
TCGCGGCGGCTGGAACATTTCTGCCGAGACTTCGAGCTGCAGAAGGTGTGTTACCTGCCG
CTCAACACCTTCCTCCTGCGCCCGCTGCACCGGCTCATGCACTATAAGCATGTCCTGGAG
AGGCTGTGCAAGCACCACCCACCAAACCACGCCGACTTCAGGGACTGCAGAGCTGCGCTG
GCGGAGATCACAGAGATGGTGGCACAGCTGCATGGTACCATGATCAAGATGGAGAACTTC
CAGAAGCTGCATGAGCTCAAGAAAGATCTGATCGGCATTGACAATCTTGTGACCCCAGGA
AGGGAGTTCATCCGCCTGGGCAGCCTCAGCAAGCTCTCCGGGAAGGGGCTTCAGCAGCGC
ATGTTCTTCCTGTTCAACGATGTCTTGCTGTATACCAGCCGGGGACTGACGGCATCTAAT
CAGTTTAAAGTCCACGGACAGCTCCCACTCTATGGCATGACGATCGAGGAGAGTGAGGAG
GAGTGGGGTGTGCCCCACTGCCTGACCCTGCGGGGCCAGCGGCAATCTATCATCGTGGCT
GCCAGTTCCCGGTCAGAGATGGAAAAATGGATGGAGGACATCCAGATGGCCATTGACCTG
GCAGAGAAAAGCAATGGACCCACCCCCGAGCTCCTTGCCAGCAGCCCCCCTGACAACAAG
TCCCCGGATGAAGCCACAGCGGCTGACCAGGAGTCAGAGGATGACCTGAGTGCCTCTCGG
ACATCGCTGGAGCGCCAGGCCCCTCACCGTGGCAACACGATGGTGCACGTGTGCTGGCAT
CGCAGCACCAGTGTCTCCATGGTGGACTTCAGCATTGCTGTGGAGAACCAGCTCTCTGGG
AACTTGCTGAGAAAGTTCAAGAACAGCAATGGCTGGCAGAAGCTGTGGGTGGTATTCACC
AACTTCTGCCTGTTCTTCTACAAATCACACCAGGACAGTCACCCCCTTGCCAGCCTGCCT
CTGCTGGGCTACTCCCTCACCATCCCCTCTGAGTCTGAGAACATCCACAAGGACTATGTG
TTCAAGCTGCATTTCAAGTCCCACGTGTACTACTTCAGGGCTGAAAGCGAATACACATTT
GAAAGGTGGATGGAAGTGATCCGAAGTGCCACCAGCTCAGCCTCTCGGGCCCACATCTTG
AGTCACAAAGAATCTCACCTGTAC
Protein sequence predicted based on nucleotide sequence
MGEIEQKPTPASRLGAPENSGISTLERGQKPPPTPSGKLMTVKIQMLDDTQEAFEVPQRA PGKVLFDAVCNHLNLVEGDYFGLEFPDHRKIVVWLDLLKPIVKQIRRPKHVVVKFVVKFF PPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLISHIVQSEIGDFDEALDREHL AKNKYVPQQDALEDRIMEFHHSHVGQTPAESDFQLLEVARRLEMYGIRLHPAKDREGTKI NLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRPDVNSSYQDTLEFLMAGRD FCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRGSSFRFSGRTQKQVLDYVKEGGHKKVQ FERKHSKIHSTRSLVSQPTAPNSEVPKQSPQSASLTFGEGTESPGGQSCQQAKETKACTL ELGPHQSPALPKSPPGSKAADGTTVVPPEEEEEEEGGKDGIRPSNPQPPQPSTGSLTGSP HLSELSINSQGGAAPANVTLSPNLSPDNKQASPLISPLLNDQACPRTDDEEEGRRKRFPT DKAYYIAKEVSTTERTYLKDLEVIASWFQSTVSKEDSMPEALKSLIFPNFEPLHKFHTNF LKEIEQRLALWEGRSNAHVRGDYQRIGDVMLKNIQGMKHLAAHLWKHSEALEALETSIKG SRRLEHFCRDFELQKVCYLPLNTFLLRPLHRLMHYKHVLERLCKHHPPNHADFRDCRAAL AEITEMVAQLHGTMIKMENFQKLHELKKDLIGIDNLVTPGREFIRLGSLSKLSGKGLQQR MFFLFNDVLLYTSRGLTASNQFKVHGQLPLYGMTIEESEEEWGVPHCLTLRGQRQSIIVA ASSRSEMEKWMEDIQMAIDLAEKSNGPTPELLASSPPDNKSPDEATAADQESEDDLSASR TSLERQAPHRGNTMVHVCWHRSTSVSMVDFSIAVENQLSGNLLRKFKNSNGWQKLWVVFT NFCLFFYKSHQDSHPLASLPLLGYSLTIPSESENIHKDYVFKLHFKSHVYYFRAESEYTF ERWMEVIRSATSSASRAHILSHKESHLY
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
End on reference sequence
3522
Start on reference sequence
376
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223.1
Synonyms:
pDONR-223.1, pENTR223-star-Sfi
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php
Size (bp):
4311
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (Sfi sites flank the cassette present only in no insert form)
1265
1277
bacterial origin
ori
bacterial origin of replication
1
534
negative selection marker
ccdB
ccdB (no insert form only; lost in with insert form)
1312
1617
primer site
M13 F
M13 forward primer for insert sequencing
1113
1129
primer site
T7
T7 Forward primer for insert sequencing
2902
2921
primer site
M13 reverse
M13 reverse primer for insert sequencing
2926
2942
recombination site
attL1
attL1 recombination site
1165
1264
recombination site
attL2
attL2 recombination site
2786
2885
selectable marker
CmR
chlR (no insert form only; lost in with insert form)
1959
2618
selectable marker
SpnR
spectinomycin resistance gene
3154
4164
