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PPZ1 (Saccharomyces cerevisiae) in pBY011 (yeast expression vector)

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Explanation of Terms


Gene: Gene Symbol:  PPZ1
Gene Name:  may play a role in regulating osmotic stability
Sequence             
Original Clone ID: FLH259939.01X
Keyword: None
Species: Saccharomyces cerevisiae
Type: cDNA
Vector Name: pBY011               Format:  CLOSED
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
ScCD00096122

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 2079nts         Open reading frame : 1 to 2079

ATGGGTAATTCAAGTTCAAAATCTTCGAAAAAGGATTCACATTCGAATTCCTCCTCGAGA
AATCCTCGTCCTCAAGTGTCGAGAACCGAGACTTCCCATTCTGTGAAGTCTGCAAAATCA
AATAAATCTTCAAGATCAAGGCGATCTCTTCCTTCTTCGTCCACTACGAATACTAATTCA
AACGTCCCTGATCCCTCCACTCCATCAAAGCCCAATCTTGAGGTTAATCACCAACGACAT
AGCTCTCACACGAATCGTTACCATTTCCCATCTAGCTCACACTCGCATTCAAATTCTCAA
AACGAATTGTTAACTACTCCTTCATCATCCTCTACTAAGAGGCCTTCTACTTCTAGAAGA
TCAAGTTATAATACTAAGGCTGCTGCTGATTTACCACCTTCAATGATCCAAATGGAACCC
AAGTCACCCATTTTAAAAACAAACAATAGTAGCACACACGTATCCAAGCATAAATCTTCA
TACTCATCTACCTATTATGAGAACGCCTTAACCGATGATGACAATGATGATAAAGACAAC
GACATCTCGCACACTAAAAGGTTTTCTAGATCTTCGAATTCTCGTCCGTCCAGTATAAGA
AGCGGATCAGTGTCAAGAAGGAAATCAGATGTGACCCATGAAGAGCCTAACAATGGATCA
TACTCCTCTAACAATCAGGAGAATTATCTCGTTCAGGCATTAACCCGGTCAAATTCTCAT
GCATCTTCGCTACACAGTAGGAAATCTTCGTTTGGATCAGATGGTAATACCGCATACAGC
ACCCCATTAAACTCTCCAGGCTTGTCCAAGCTAACAGATCACTCTGGTGAATACTTTACC
TCTAATTCAACCTCCTCATTGAATCACCATTCAAGTCGCGATATTTACCCGAGCAAACAC
ATCAGCAATGATGATGACATTGAAAATTCATCTCAATTGAGTAATATCCATGCATCAATG
GAAAATGTTAATGATAAAAATAATAATATAACAGATAGCAAAAAAGATCCGAATGAGGAA
TTTAATGATATAATGCAATCTTCCGGAAACAAAAACGCTCCAAAAAAATTCAAAAAGCCT
ATCGATATTGATGAAACTATCCAAAAATTACTGGATGCGGGCTACGCTGCTAAGAGAACA
AAAAATGTTTGTTTGAAGAACAATGAAATTTTACAGATTTGCATCAAGGCTCGTGAAATC
TTTCTTTCTCAACCTTCCTTATTAGAATTATCACCTCCTGTAAAAATTGTAGGCGACGTT
CATGGCCAATATGGGGATCTCTTAAGGCTTTTTACCAAATGTGGGTTCCCACCATCCTCG
AACTATTTATTCCTAGGTGATTATGTGGACCGTGGTAAACAGTCACTGGAGACTATTTTA
CTATTGTTTTGTTACAAAATAAAATACCCTGAAAATTTCTTTTTATTGAGAGGCAACCAT
GAATGTGCTAACGTCACAAGGGTTTATGGATTTTATGATGAATGTAAACGTCGTTGTAAC
ATCAAGATCTGGAAGACATTCATCGATACTTTTAATACATTACCATTAGCTGCTATCGTA
GCCGGAAAGATTTTTTGTGTTCATGGTGGATTGTCGCCAGTTTTAAATTCTATGGATGAA
ATCAGACATGTAGTTAGGCCTACTGATGTACCAGATTTTGGCTTAATTAATGATCTTTTG
TGGTCCGATCCCACAGATTCACCCAACGAATGGGAGGATAACGAACGTGGTGTAAGTTAC
TGTTATAATAAGGTGGCAATTAACAAATTCTTGAACAAGTTTGGGTTTGATTTGGTTTGT
AGAGCTCACATGGTTGTGGAAGACGGTTATGAATTTTTCAATGATAGAAGTCTCGTTACG
GTGTTTTCCGCGCCAAATTATTGTGGTGAATTTGATAATTGGGGGGCTGTAATGAGCGTC
AGCGAAGGTTTATTGTGCTCTTTTGAATTGTTAGATCCACTAGATAGTGCAGCTTTGAAG
CAAGTTATGAAGAAAGGTAGACAGGAAAGAAAACTGGCTAATCAACAACAGCAAATGATG
GAAACAAGCATCACAAATGATAACGAATCTCAACAGTAG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 2079
Start on reference sequence 1
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  yeast    Marker:  URA
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pBY011

pBY011 in advanced viewed

Synonyms: None
Sequencing Primer: Forward:  M13F
Reverse:  M13R
Description: Yeast expression vector with ARS1, CEN4, Gal1-10 promoter; amp resistance (URA3 for yeast); recombinational cloning.
Comments: This is a bacteria-yeast shuttle vector useful for expressing cDNAs in yeast that includes an auxotrophic marker for selection in yeast.
Size (bp): 8121
Parent Vector: Name: YCplac33
Description: Parent vector is a CEN4, URA3, ampR, ColE1 vector from R.D. Geitz described in Gene 74(2) 5270534 (1988). The Gal1-10 promoter and the Gateway-type attR recombination cassette (reference frame A, see information at the Invitrogen website) were inserted into the parent to create pBY011.
Empty Vector: None
Properties: Gateway, acceptor (destination), inducible expression, recombinational cloning, with tag/fusion/marker, yeast expression, yeast shuttle
Author Name: Bhullar
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin ColE ColE1 bacterial origin 3651 4333
negative selection marker ccdB ccdB negative selection marker gene LOST in recombined (with insert) form 4915 5124
primer M13 reverse M13 reverse sequencing primer 4702 4722
primer M13 forward M13 forward sequencing primer 7183 7200
promoter Gal1 Gal1-10 yeast promoter 6934 7145
promoter Ura3 promoter URA3 promoter 2349 2378
recombination site attR2 attR recombination site 2, lost or altered in recombined (with insert) form 4749 4764
recombination site attR1 attR recombination site 1, lost or altered in recombined (with insert) form 6439 6455
selectable marker Ura3 URA3 1460 2263
selectable marker CmR chloramphenicol resistance gene LOST in recombined (with insert) form 5566 6222
selectable marker AmpR ampicillin resistance gene 2894 3553
yeast centromere CEN yeast centromeric sequence 255 7396
yeast origin ARS1 ARS1 yeast origin of replication 0 0

 

  • Gene
  • Protein
  • Clone
  • Organism

Gene

Target GenBank: CAA89936

 

Clone

Cloning Information : 259939
HIP Master Clone ID : 123877
Original Clone ID : FLH259939.01X

Organism


Species Specific ID: YML016C