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Detailed Plasmid Information

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Explanation of Terms


Gene: Gene Symbol:  None
Gene Name:  None
Sequence             
Original Clone ID: FLH262658.01X
Keyword: None
Species: Saccharomyces cerevisiae
Type: cDNA
Vector Name: pBY011               Format:  CLOSED
Source: HIP
Description: None
Comments: None
Mutation/
Discrepancy :
No / No
Publications: None
Authors:
ScCD00096977

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AVAILABLE
No restriction
Special MTA: None

 

Insert sequence: 3042nts         Open reading frame : 1 to 3042

ATGAAGGACTTGTCTCATTATGGTCCTGCGCTATGTGTTAAATTTTACAATGATTATGTT
CTAGCTGGTTATGGGCCTTTCATCCATGTCTATGACTATCATTCGGCTACGTTGATTAAC
AAATGTAGGCTATTTCACTACAATAAAGTTCATGGACTTAGCCTTTCTAGTGAAGGGAAA
ATTTTGGCCTATGGTGCAAGATCAGTAACAATAGTGGAACTTGAAGACGTTTTAAAGAAA
GAGTCATTGGTGGATTTCGAAAGGATTAACTCAGATTGGATTACCGGTGCTACATTCAGC
TTTGACAACTTGCAAATATATTTGTTAACATGTTATAATAAAGTGCTAATTTGTGATTTA
AATTGTGAAGTTCTTTTTAGGAAGTCTCTTGGGGGAGAAAGATCTATTCTATATTCCGGT
ATAATTAAAGTTTTCGGTCCGGATAAAGTATATGTTAACGCTGGTACTGTAATGGGCGGT
GTTATCATTTGGGACCTGTTCTCGGAGACAAAAATTCATAACTTACTGGGTCATGAAGGT
TCTATCTTTTATGTTAATTTAAGCAACAACGGAAGATATGTTGCCAGTTGCTCTGACGAC
AGATCAATTAGACTGTGGGATTTAGAAACTGGCAAGCAGCTGTCTGTTGGCTGGAGCCAT
ACGGCAAGAATATGGAATTTAATGTTTTTTGATAATGATTCAAAACTAATAAGTGTTTCT
GAAGATTGCACATGCCGTGTATGGAACATTATCGAATCACGAGAAAACGTTGCCGAATTA
TCCATATCTAACGTTTACGAAGTACATTTAATCAAGAGTATATGGGGCGTTGATGTGAAA
GACGACGAAATGATAGCTGTAACCTCCGGGAATGATGGTAGGTTAAAGCTGATTGATCTT
CTTCAACTGAAGAGACACGGCGATGAAGAAACATCGTTCAGTCTAGATGATATCGCAAAG
CAATGTGGCGATATTTTCGAAAAGAATGAAAGTATCAAGGGATTTCAATGGTTTTCATTC
GGTGTAATTGCTATCACTTCATTGGGTAAAATACTTAAATACAGTGATGTCACGAAACAA
TGGAAGTTGTTACTAACAAATGAAAAATTCAACTCGTATCCAATTACAAATGGGATTCAA
ACGCAAAATATCGCTGTCTTTTCCAATAATAAAAGTGACATCCTTCTTATCAAATTTAGC
AAAGATAGCGCTGACATAATTGAGACCGAAGAATTCCATTTAGATGAGCTTTCTAAGACA
AATAACTGTCTCGTTACAGAATACGATGATGACTCCTTCCTATTGACTTTACAATCCCCA
AATCCTCGAGAGAAGTTTGTATGTTTGGAAATAAGCCTTCAGAACTTAAAAATTAAAAGC
AAGCACTGTTTCAATAAGCCGGAAAATTTTTCTTCCTCATGTTTGACCTCCTTCCGAAAT
CATATTTTAGTCGGCTCACGTTTTAGTACATTAGTAATCTACAACTTACTTGATGAGAGC
GAGGAGCCCTTCATAATTAGGAGATTAAGTCCCGGAGACACTACAACCTCAATCGAATTT
GTAGAAGATAAAGACAACTCTGCGGTCTTCTCAGTAACAAATAGGGATGGCTATTATGTA
TTTATTGAGTTGACGAAAAACAGTTTGGAAGAGGGTCCCTACCGACTAAGTTATAAGGTC
TTGCATTCTAATAAGATGATGAAAGGTTTCTTGGAGGGCGCTTTCTTTAATTCAAAAGGT
GAATACATTACTTATGGGTTCAAGTCCAGCTTGTTTTATCTCTACAATGAAACCAACTGT
TATGAACTAGCTAGTGAAGTTTGTGGTGGTTCCCATCGTCTGTGGAATCTCGCAAAAATT
ACTGATGGCCACGTATTAATGTATATTAAGGCATCCCGATTTCATTTAAGGAAAATTTAC
AACTCCATTGTGCCTGAAACTTTAGAAAATGGTGTACACGGAAGGGAAATCAGAGATATT
TCAATCTGTCCTGTTTCAAATACCAACACGAATGACAATTTTAAGGATGGGCATATATTC
TGTACTGCATCTGAAGATACTACAATTAAGCTGGGATATTTTAACAATAGAACAGGGAAG
GTGCAGAATTTTTGGACACAAAGAAAGCATGTGTCTGGATTACAACGTTGTCAGTTTATA
AATCACAAACTAATGATATCATCTTCAGCTAGAGAGGAGTTATTCTTATGGGAATTGAAC
GATAAGTATAATAAACGACCATATATGACCATACGACAAGCTTTACCTGTATCCACAAAT
AATTCTGATCTAAGGATCATGGATTTTGATGTCAAATTTATATCACAGTCAGGTGACTTC
TTATTAGTTACTGTTTATTCAGATTCAACAATAAAGATTTGGCACTATAGGGAAAATCAG
AATAAGTTTGACCTGATCATGCAAGGTCGTTATAAGACGTGCTGTTTATTCAACGTCGTA
TTTATTGCACTGAAAGAAGAGCTCCTTGTTGTCATTTCACCAACTGATGGACATTTAGTG
GTTTATAATATAACCGAGTACGTACCATTTTCCGTTGATCCGATTTCTGGCGATTTGGTT
GACCACAAACTGGACGCTACTATCTCAAATCTTCCCGCACCTGTAGCGCAGTTGCCGGTA
CATCAATCTGGTGTCAAGTCCCTAGACTATGTTGCTAATGCTACAAGAACTTCCGCCACA
ATTTTGACAGGGGGTGATGATAATGGTTTAGGGTTAAGCAACCTGAAATTAGATGACTCG
AATAAAGTAACGTTAAAAACAAGTGACTTTATCGCTGCAGCAGCTTCTTCGACAATAACG
TCCGGTATGTTGATTAATGGTGGCAAAGAAGTCATTACCACATCGGTTGATCAAGTAATA
CGCGCTTGGGAAATTACCGCAGGCAAGCTTTCACTGGTAGATAAAAAGCGTACCACTGTG
GCGGATACAGGATCATTAGAAATCATTTCCAATGATGAAGATGCTGATTCTGAGAAAACG
TTACTGATCGGAGGTGTTGGTTTATCAATTTGGAAAAAATAG


Coding Sequence Details
Insert Sequence Verified?: N Verification Method: Insert was fully sequenced in parent vector
Reference Sequence Annotations:
End on reference sequence 3042
Start on reference sequence 1
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
5p GTACAAAAAAGCAGGCTCCACC(atg-goi)

3' Linker Sequence:
5p (goi-stop)GACCCAGCTTTCTTGTAC

 

 Recommended Growth Condition:

Distributed in bacterial strain : DH5-alpha T1 phage resistant
Antibiotic Selection: Host Type:  bacterial    Marker:  ampicillin
Host Type:  yeast    Marker:  URA
Bacterial Selection Condition:  100 ug/mL ampicillin
Growth Condition:  Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:  Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results: None
Recommended expression in: Not Applicable
       DyNA Vector Map

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Vector Name: pBY011

pBY011 in advanced viewed

Synonyms: None
Sequencing Primer: Forward:  M13F
Reverse:  M13R
Description: Yeast expression vector with ARS1, CEN4, Gal1-10 promoter; amp resistance (URA3 for yeast); recombinational cloning.
Comments: This is a bacteria-yeast shuttle vector useful for expressing cDNAs in yeast that includes an auxotrophic marker for selection in yeast.
Size (bp): 8121
Parent Vector: Name: YCplac33
Description: Parent vector is a CEN4, URA3, ampR, ColE1 vector from R.D. Geitz described in Gene 74(2) 5270534 (1988). The Gal1-10 promoter and the Gateway-type attR recombination cassette (reference frame A, see information at the Invitrogen website) were inserted into the parent to create pBY011.
Empty Vector: None
Properties: Gateway, acceptor (destination), inducible expression, recombinational cloning, with tag/fusion/marker, yeast expression, yeast shuttle
Author Name: Bhullar
Publications: None
Vector Map:         Vector Sequence:
Sequence:

 



Vector Features:

Type Name Description Start Position End Position
bacterial origin ColE ColE1 bacterial origin 3651 4333
negative selection marker ccdB ccdB negative selection marker gene LOST in recombined (with insert) form 4915 5124
primer M13 reverse M13 reverse sequencing primer 4702 4722
primer M13 forward M13 forward sequencing primer 7183 7200
promoter Gal1 Gal1-10 yeast promoter 6934 7145
promoter Ura3 promoter URA3 promoter 2349 2378
recombination site attR2 attR recombination site 2, lost or altered in recombined (with insert) form 4749 4764
recombination site attR1 attR recombination site 1, lost or altered in recombined (with insert) form 6439 6455
selectable marker Ura3 URA3 1460 2263
selectable marker CmR chloramphenicol resistance gene LOST in recombined (with insert) form 5566 6222
selectable marker AmpR ampicillin resistance gene 2894 3553
yeast centromere CEN yeast centromeric sequence 255 7396
yeast origin ARS1 ARS1 yeast origin of replication 0 0

 

  • Gene
  • Protein
  • Clone
  • Organism

Gene

Target GenBank: CAA97892

 

Protein

SMART domain : WD40 : WD40 repeats

Clone

Cloning Information : 262658
HIP Master Clone ID : 123650
Original Clone ID : FLH262658.01X

Organism


Species Specific ID: YPL183C