Gene:
Gene Symbol:
PCDHB16
Gene Name:
protocadherin beta 16
Original Clone ID:
FLH160439.01F
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDNR-Dual
Format:
FUSION
Source:
HIP
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
HIP
HsCD00021808
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
ATGGAGATTGGATGGATGCACAATCGGAGACAAAGGCAAGTCCTTGTTTTCTTTGTTTTG
CTGAGCTTGTCTGGGGCGGGCGCCGAGTTGGGGTCCTATTCCGTAGTGGAAGAAACGGAG
AGAGGCTCTTTTGTGGCAAATCTAGGAAAAGACCTGGGGTTGGGGTTGACAGAGATGTCC
ACCCGCAAGGCCAGGATCATTTCCCAGGGGAACAAACAGCATTTGCAGCTCAAGGCTCAA
ACTGGGGATTTGCTCATAAATGAGAAGCTAGATCGAGAGGAGCTATGCGGTCCCACTGAG
CCTTGCATACTACATTTCCAAGTGTTAATGGAAAACCCTTTAGAAATATTTCAGGCTGAA
CTGAGGGTGATAGATATAAATGACCATTCTCCCATGTTCACTGAAAAGGAAATGATTCTA
AAAATACCGGAAAACAGTCCTCTAGGAACTGAGTTCCCTCTGAATCATGCTTTGGACTTG
GACGTAGGAAGCAATAATGTTCAAAACTATAAAATCAGCCCAAGCTCTCATTTCCGGGTT
CTAATCCATGAATTCAGAGATGGCAGGAAATACCCTGAGCTAGTGTTGGATAAAGAGCTG
GATCGGGAGGAGGAGCCTCAACTAAGATTAACCCTGACAGCGCTGGATGGTGGCTCTCCA
CCGCGATCTGGAACTGCTCAGGTCCGTATTGAAGTGGTGGACATCAATGATAACGCTCCT
GAGTTTGAGCAGCCCATCTACAAAGTGCAGATTCCAGAGAACAGTCCTCTTGGCTCCCTG
GTTGCCACCGTCTCCGCCAGGGATTTAGACGGCGGAGCCAATGGAAAAATATCATACACA
CTCTTTCAGCCTTCGGAGGATATTAGTAAAACTTTGGAGGTAAATCCTATGACAGGGGAA
GTTCGACTGAGAAAGCAAGTAGATTTCGAAATGGTTACGTCTTATGAAGTGCGCATCAAA
GCCACAGATGGGGGAGGTCTTTCAGGAAAGTGCACTCTTCTCCTGCAGGTGGTGGACGTG
AATGACAATCCCCCACAGGTGACCATGTCTGCACTCACCAGCCCCATCGCAGAGAACTCG
CCTGAGATAGTAGTTGCTGTTTTCAGCGTTTCAGATCCTGACTCCGGAAACAATGGGAAG
ACGATTTCCTCCATCCAGGAAGACCTTCCCTTTCTTCTAAAACCTTCAGTCAAGAACTTT
TACACCTTGGTAACGGAGAGAGCACTCGACAGAGAAGCAAGAGCTGAATATAATATCACC
CTCACCGTCACAGATATGGGGACTCCAAGGCTGAAAACGGAGCACAACATAACAGTGCAG
ATATCAGATGTCAATGATAACGCCCCCACTTTCACCCAAACCTCCTACACCCTGTTCGTC
CGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCAGCGCCACAGACAGAGACTCG
GGCACCAACGCCCAGGTCACCTACTCGCTGCTGCCGCCCCAAGACCCGCACCTGCCCCTC
GCCTCCCTGGTCTCCATCAACGCGGACAACGGCCACCTGTTCGCCCTCAGGTCGCTGGAC
TACGAGGCCCTGCAGGCTTTCGAGTTCCGCGTGGGCGCCACAGACCGCGGCTCCCCCGCG
CTGAGCAGAGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTA
GTGCTGTACCCGCTGCAGAACGGCTCCGCGCCCTGCACTGAGCTGGTGCCCCGGGCGGCC
GAGCCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAATGCC
TGGCTGTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGTGTGTGGGCGCAC
AATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCAGCCAAGCAGAGGCTG
GTGGTGCTGGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCACGTG
CTCCTGGTGGACGGCTTCTCCCAGCCCTTCCTGCCGCTCCCAGAGGCGGCCCCCGGCCAG
ACCCAGGCCAACTCGCTCACTGTCTACCTGGTGGTGGCGTTGGCCTCGGTGTCGTCGCTC
TTCCTCTTTTCGGTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCC
TCGGTGGGCCGCTGCTCGATGCCTGAGGGCCCCTTTCCAGGGCGTCTGGTGGACGTAAGC
GGCACCGGGACCCTGTCCCAGAGCTACCAATACGAGGTGTGTCTGACAGGAGGCTCAGAA
ACAAGTGAGTTCAAGTTCCTGAAGCCGATTATCCCCAACTTCTCTCCTTTG
Protein sequence predicted based on nucleotide sequence
MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIAENS PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA LSREALVRVLVLDANDNSPLVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNFSPL
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence
150
End on reference sequence
2480
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDNR-Dual
Synonyms:
''
Sequencing Primer:
Forward:
M13F
Reverse:
Unknown
Description:
with tag/fusion/marker assay, Creator™, donor (entry), loxP, multiple cloning site, recombinational cloning clone with LoxP and 6X His and T7 Terminator and CmR and sopB and sacB and AmpR promoter and AmpR and ori and M13 forward and T7 promoter; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were detemined for the empty form of the vector, which is described in detail on the BD/Clontech website. Subcloning into the MCS was performed using the infusion reaction strategy and some restriction sites in the MCS may be lost after an insert is added.
Size (bp):
4938
Parent Vector:
None
Properties:
Creator, donor (entry), loxP, multiple cloning site, recombinational cloning, with tag/fusion/marker
Author Name:
BD Biosciences Clontech
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
6X His
6x(His-Asn) affinity tag
141
176
CDS
CmR
confers resistance to chloramphenicol
327
986
CDS
AmpR
confers resistance to ampicillin, carbenicillin, and related antibiotics
3103
3963
CDS
sacB
secreted levansucrase that renders bacterial growth sensitive to sucrose
1509
2930
Terminator
T7 Terminator
transcription terminator from phage lambda
212
306
primer site
T7 promoter
promoter for bacteriophage T7 RNA polymerase
4863
4881
primer_bind
M13 forward
common sequencing primer, one of multiple similar variants
4839
4855
promoter
sopB
sacB promoter and control region
1063
1508
promoter
AmpR promoter
null
2998
3102
protein binding site
LoxP
Cre-mediated recombination occurs in the 8-bp core sequence (GCATACAT).
9
42
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
4134
4722
