Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
8167
Keyword:
partial cds
Species:
Thermotoga maritima
Type:
cDNA
Vector Name:
pMH2T7
Format: 
CLOSED
Source:
Joint Center for Structural Genomics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
PSI
Joint Center for Structural Genomics
TmCD00282251
Price: 
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 2379nts
Open reading frame: 37 to 2415

ATGGGATCTGATAAAATTCATCATCATCATCATCACATGAGAAACCTGAACGAAAAGATG
AAGGATATTTTCGAGAGGAGCGTGGAGGATATCAAAGAAAGAAATCAGAACCTGCTTAGA
CCAGAGCACATTCTCCTTCAGATCCTTTACGATGAAAACGAGGCCACGAAGGTGCTGAAA
GATCTCAATGTAAACGTGGAGGAAGTGATTACTGAGCTGGAGGACTACATCGATTCCCAG
TACGGGATATACTACGGATTCTCCGATCAGGTCTATGTATCGAAAGAACTTTCTTACATC
CTGGAGCTAGCGAGAAAGGAAGCCAGGCTTTTCAAGCAGAAGGATATAGGTCCTCTTCAC
TTCCTTCTGGGACTGCTGAGAGATGGTTCCACACACGCTGCACGTGTCCTGAAGAAGTAC
GGTGTTGATTACGAAAAAGTGCTTCAGACGGTTAAGGAGCACGAAGAAGAATACGCAGCT
GAGCAGTCACCACTCACGGCTTTTGCAACCGATCTCACAAAATTGGCAAAAGAAGGAAAA
GTGGGTCCCATCATAGGAAGAGACAGGGAAATCGAGCGCGTGATAGAGATTCTCATGAGA
AAAACCAAGAACAACCCAATTCTCATCGGTGATCCGGGTGTTGGAAAAACCGCCATTGTG
GAAGGTCTCGCACAGAGAATCGTTGAAGGAAAAGTTCCTGATCCTCTAAAGGATGTGCGC
ATACTGATGGTAGATCTCGGAAGGATGATAGCGGGGACCAAATACAGGGGAGAATTCGAA
GAAAGGTTGAAATCATTCCTCGATGAAGTGATGAAACAGAAAGAAAAAACGATTCTCTTC
ATCGACGAGATACACACTCTGGTTGGTGCTGGCGCAGCCGAAGGAGCGATGGACGCTGCC
AACATGTTGAAACCGGCCCTTGCTCGCGGTGAAATACGCGTCATAGGTGCAACCACACTG
GATGAGTACAGAAAACACATAGAAAAAGACAAAGCGCTCGCGAGAAGATTCCAGCCGGTG
ATGGTGAGAGAACCGAGTGTGGAAGAGACCATAGAGATTTTGAAGGGGTTGAAGAAAGTC
TACGAGGAGCACCACAAAGTGAAGATAGAGGACGAAGCGATAGAGGCAGCTGCCAAGCTC
TCAGCGAGATACATAACGGACAGATTCTTGCCAGACAAGGCGATTGACCTGCTGGATGAG
GCGGCAGCGAGAGTGAGACTCAGCGCTACAAAACAGGAAAAGGATGAAACGAAGCTTCGC
GAGCTCGAGGAAAAAATAAAAGAGCTTGAAACGAAAATCGATGAGCTCACTATAAGATCT
CAGTACAAAGAAGCGGCTGATCTCAAGAAAGAACTCTTCAAGCTCAAAAATGAGTATGAA
GCTTTGAAGAGTGGGAAACCGGTTGTCACAGCGGAAAAAATAGCAGAAGTGGTTGAATCC
TGGTCTGGTGTTCCAGTTTCCAGAATCGTTGAATCTGAAAAGGAAAAGCTTCTGAAGCTC
GAAGAGATAATCCACCAGAGGCTCGTGGACCAGGAGGAAGCGGTCAAGGTAGTGGCCGAT
GCCATCAGGAAGGCAAGGGCTGGAATAAAAGATCCTAACAGGCCAGTTGGTACCTTCCTC
TTTCTTGGACCAACGGGTGTTGGTAAGACTGAGCTCGCAAAGACACTCGCTGAAGTGCTC
TTTGGAAGCGAAAACGCACTGATACGAATCGACATGACCGAATACATGGAAAAGCACGCT
GTCTCCAAGCTGATAGGAGCACCTCCGGGATACGTTGGTTACGAGGAAGGTGGTCAACTG
ACCGAAGCCGTAAGAAGAAGACCGTACAGTGTTATATTGCTCGATGAGATTGAAAAAGCG
CATCCGGATGTGTTCAACATACTGCTTCAGATAATGGACGATGGAAGACTCACAGACAGC
AAAGGAAACGTTGTTGATTTCAAGAACACGATCATCATCATGACGAGTAACATAGCAAGC
GATCTGATACTGAACTACGTTAAAGAAGGAAAGAGCTTTGATGAGATTGAAGAAAGAGTC
AGAGAAGAGCTGAAACACTACTTCAGACCCGAGTTCATAAACAGGATAGACCATGTCGTT
GTCTTCAAACCGCTCACAAAAGAACACATGAAACAGATCGTGGAAATAATGATCAGAAGA
CTTGAAGCGCGGTTGAAGGACAAGAATATAAAACTCACGATCACTGAAGCGGCGAAAGAA
TACCTCGCAGAAAAAGGATACGATCCAACGTTCGGTGCAAGACCGCTGAGGCGGCTGATA
GAAAGGGAAATCGAAACACCACTCGCAAGAATGATCATAGCAGGTGAGGTGCAGGAAGGT
CAGACGGTGAGAGTGGATTACAACGGTGAAAAACTGATCCTCGAAGTTGCCAGAGAACTC
GAGAAGGTTCAGTAA

Protein sequence predicted based on nucleotide sequence

MRNLNEKMKDIFERSVEDIKERNQNLLRPEHILLQILYDENEATKVLKDLNVNVEEVITE
LEDYIDSQYGIYYGFSDQVYVSKELSYILELARKEARLFKQKDIGPLHFLLGLLRDGSTH
AARVLKKYGVDYEKVLQTVKEHEEEYAAEQSPLTAFATDLTKLAKEGKVGPIIGRDREIE
RVIEILMRKTKNNPILIGDPGVGKTAIVEGLAQRIVEGKVPDPLKDVRILMVDLGRMIAG
TKYRGEFEERLKSFLDEVMKQKEKTILFIDEIHTLVGAGAAEGAMDAANMLKPALARGEI
RVIGATTLDEYRKHIEKDKALARRFQPVMVREPSVEETIEILKGLKKVYEEHHKVKIEDE
AIEAAAKLSARYITDRFLPDKAIDLLDEAAARVRLSATKQEKDETKLRELEEKIKELETK
IDELTIRSQYKEAADLKKELFKLKNEYEALKSGKPVVTAEKIAEVVESWSGVPVSRIVES
EKEKLLKLEEIIHQRLVDQEEAVKVVADAIRKARAGIKDPNRPVGTFLFLGPTGVGKTEL
AKTLAEVLFGSENALIRIDMTEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPYSVI
LLDEIEKAHPDVFNILLQIMDDGRLTDSKGNVVDFKNTIIIMTSNIASDLILNYVKEGKS
FDEIEERVREELKHYFRPEFINRIDHVVVFKPLTKEHMKQIVEIMIRRLEARLKDKNIKL
TITEAAKEYLAEKGYDPTFGARPLRRLIEREIETPLARMIIAGEVQEGQTVRVDYNGEKL
ILEVARELEKVQ*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 2378
Mutations:
None
Discrepancy:
ins@916,1;
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  ampicillin
Bacterial Selection Condition: 100 ug/mL ampicillin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
ProteinExpressed: Not_Applicable
ProteinPurified: Protein_Purified
SolubleProtein: Tested_Not_Soluble
Find experimental protocols in 372109
Recommended expression in:
Not Applicable