Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
38330
Keyword:
None
Species:
Shewanella denitrificans OS217
Type:
cDNA
Vector Name:
pSpeedET
Format: 
CLOSED
Source:
Joint Center for Structural Genomics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
Joint Center for Structural Genomics
SdCD00283033
Price: 
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1617nts
Open reading frame: 51 to 1667

CTGATAAAATTCATCATCATCATCATCACGAAAACCTGTACTTCCAGGGCATGCTAGAGC
AAACGTTACTGGATATCGCTTTAGATCTTAGCCAAAGCCTGCCTAAAAAAGCCCTCTATC
AGCGCTTTATGACAGCCGTTAACCAAGTCATGCCCTGTGATGCGGTAGCCCTACTTGAAT
ATCAAGGCCATGAATTAGTGCCCGTCGCCGTGGATGGCCTGCTGCCCGAAGTGCTGGGCA
TGGGATTTTCCCCTGAGGACCACCCTAGATTGCAAGCCATTATGGCTTCCAAGCAACCTA
TTCGCTTTAACGCCGACTCTGAACTTGCCGACCCTTATGATGGCTACTTGGTCATAGATC
CTAAACGTGTACTCGATGTTCATGCCTGCATAGGTTGCAGCCTCTTTGTCGAAGGCAGGC
TCGTTGGGGTACTCACCTTAGATGCGCTCAATGTGGGCGCCTTCGATGCCATAGACGATA
TTACTATCGCAACCCTAGCAGCCCTTGCCGCCGCGACCATACGTAACGTTAACTTGCTCA
ATCAGTTGGACCGCCAGCAGTATAAGCTTGATGACAATGACAGTGTATTTAAGCAAAAGC
CGTTAAAAAAGTCTGACTTCATCGGTGAGACCCCCTGCATGCAGGCCCTTAAAGACGATA
TTCGCATTGTGGCAAACTCCGAATTATCTGTGATCATTGGCGGTGAAACCGGTGTGGGGA
AGGAGCTGGTGGCTCGCAGCCTGCACGCACAATCTAAACGCCGAGCCCAAGCCTTAGTGC
AAGTCAATTGCGCCGCCCTGCCCGATACCTTGGCAGAGAGCGAGTTATTTGGTCACAGTA
AAGGTGCCTTCACTGGCGCCGCCAAAGACAGAATGGGCAAATTTGAGCTGGCCCATCAAG
GCACACTGTTTCTCGATGAAGTGGGTGAGTTATCCTTAGAATTACAGGCAAAATTATTGC
GTGTCATTCAGGAAGGTGAAATTCAGCGCATTGGCCTTGACCGCAACATTCATGTGGACG
TGCGCATCATCGCCGCCTCCAATCGCAATTTACTTCAGCGAGTAAAAGAAGGCCTATTTC
GAGAAGACTTGTACCACAGGTTATGTGTCTATCCCCTCAATGTCCCGCCGCTGCGAGAGC
GGCAAGACGATATCCCCTTGCTGTGCGGCAATATACTCACCAACCTTAAACATAAGATTG
GCCTAAGCAGCGCCAAGACAGTGCGTTTAACACAAGCCGCCATGCAAAAGCTTCAGGGCT
ATCCTTGGCCCGGCAACGTACGAGAATTACAACATGTTTTAATGCGCGCCGCCTTGAAAG
CCAGCGCCGAAGCTAAAGGCATTACTGTCATCCAGCTGCATCACTTAACCTTTGCCTGCG
AGCCCATGAGCCAAGGACTCACTGAGTTGACCGCGTTTAACTCAAACTCGCCTGATTCTA
ATCCATCAACCAGTGACGAGACGTTCGCTGCCGCAAATCGAGAAGAAAAAGTCGAGCCGC
CAGTCATTAGTCGCTCCTTCAACGATAGGGTGGCTGATTTTCAGCGCCAAGTCATACGCC
AATCACTTGATGACAATAGCCAAGTCTGGGCCAAAGCCGCGCGGCAGTTACAGTTAGACC
GAGGGAATTTGCATCGTCAAGCCAAACGTTTAGGGCTAATTCCTTAACGCGACTTAATTA
A

Protein sequence predicted based on nucleotide sequence

MLEQTLLDIALDLSQSLPKKALYQRFMTAVNQVMPCDAVALLEYQGHELVPVAVDGLLPE
VLGMGFSPEDHPRLQAIMASKQPIRFNADSELADPYDGYLVIDPKRVLDVHACIGCSLFV
EGRLVGVLTLDALNVGAFDAIDDITIATLAALAAATIRNVNLLNQLDRQQYKLDDNDSVF
KQKPLKKSDFIGETPCMQALKDDIRIVANSELSVIIGGETGVGKELVARSLHAQSKRRAQ
ALVQVNCAALPDTLAESELFGHSKGAFTGAAKDRMGKFELAHQGTLFLDEVGELSLELQA
KLLRVIQEGEIQRIGLDRNIHVDVRIIAASNRNLLQRVKEGLFREDLYHRLCVYPLNVPP
LRERQDDIPLLCGNILTNLKHKIGLSSAKTVRLTQAAMQKLQGYPWPGNVRELQHVLMRA
ALKASAEAKGITVIQLHHLTFACEPMSQGLTELTAFNSNSPDSNPSTSDETFAAANREEK
VEPPVISRSFNDRVADFQRQVIRQSLDDNSQVWAKAARQLQLDRGNLHRQAKRLGLIP*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 1617
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Not_Applicable
ProteinPurified: Protein_Purified
SolubleProtein: Tested_Not_Soluble
Find experimental protocols in 381925
Recommended expression in:
Not Applicable