Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
11174o2BCt11p1
Keyword:
None
Species:
Vibrio parahaemolyticus RIMD 2210633
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
C-terminal 6-His, TOPO
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
VpCD00291991
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 996nts
Open reading frame: 48 to 1043

TCTAGATATTTTGTTTACTTTAAGAAGGAGATATACATATGTCCCTTACCAATAAGAAAA
ACCTCCGTGTCGTAGCGCTTGCTCCGACAGGGAGGTATTTTGCATCAATAATAAGCTCAC
TAGAGATCTTGGAAACAGCTGCTGAGTTTGCAGAGTTCCAAGGTTTCATGACACACGTCG
TTACGCCAAACAATCGGCCGTTAATTGGTCGAGGGGGGATCAGTGTTCAACCCACCGCAC
AATGGCAATCATTTGATTTTACAAACATATTAATCATTGGCTCAATTGGCGATCCTTTAG
AATCGTTAGATAAGATCGATCCTGCATTGTTCGATTGGATCAGAGAGTTACACCTAAAAG
GCAGCAAAATAGTTGCAATTGACACCGGTATTTTTGTCGTCGCGAAAGCCGGTCTTTTGC
AGCAAAACAAAGCTGTAATGCATTCTTACTTCGCCCACCTCTTTGGCGAACTGTTCCCTG
AGATAATGCTCATGACTGAGCAGAAAGCACTCATTGACGGAAACGTCTATCTTTCGTCTG
GACCTTACTCTCACTCAAGTGTGATGCTGGAAATAGTAGAAGAGTATTTTGGAAAGCACA
CTCGAAACCTTGGTAACCAGTTTTTAAGTACAATAGAGAGCAGTGGAAACTCTCATTCAT
ACTGTGATGTTTTCCGTTACATGCAACACAGAGATGAGCTGATTCTAAAAATCCAAAAAT
GGATTCTCACCACGGATCTAGACATCGTCTCTATCAGTGATTTAGCGAATGAAGCTTGCT
TATCAGAACGGCAGTTAAAACGCCGATTTAAAGAGGCGACATCCATCAGTCCGTTAAAGT
TTATTCAGTTAGGGCGTTTATCTTTTGCAAAAGAACTGTTGAGGTCAACAAAGTTGTCAA
TTGATGAAGTTGCAAGTCGGTCTGGTTATGTTGATACACAGTTTTTCAGGCAGATATTCA
AACGAGAAAATGATTGTTCTCCGCTTGAATATCGTAAAAGAAACCAAGTTAAAGCTGAAG
GGCATCATCACCATCACCACTGATCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCAACA
CTCGAGCACCAC

Protein sequence predicted based on nucleotide sequence

TNKKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISV
QPTAQWQSFDFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAK
AGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNVYLSSGPYSHSSVMLEIVEEY
FGKHTRNLGNQFLSTIESSGNSHSYCDVFRYMQHRDELILKIQKWILTTDLDIVSISDLA
NEACLSERQLKRRFKEATSISPLKFIQLGRLSFAKELLRSTKLSIDEVASRSGYVDTQFF
RQIFKRENDCSPLEYRKRNQVKAEGHHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 996
Mutations:
None
Discrepancy:
t73c,L25L;a93t,A31A;
a99g,E33E;c177t,S59S;
t267g,N89K;t339c,T113T;
c787t,L263L;a873g,R291R;
g942a,E314E;
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-11174o
Recommended expression in:
Not Applicable