Gene:
Gene Symbol:
Pcdhb11
Gene Name:
protocadherin beta 11
Original Clone ID:
FLH481757.01X
Keyword:
None
Species:
Mus musculus
Type:
cDNA
Vector Name:
pENTR223.1
Format:
CLOSED
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
The ORFeome Collaboration
MmCD00297438
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 2394nts
Open reading frame: 35 to 2428
GTACAAAAAAGCAGAAGGGCCGTCAAGGCCCACCATGGAGACAGCGCTAGCAAAAATGCC
AGAGCAAAGGCAAGTCTTTTTTCTTACTATCTTGTTGCTGTTGTGGAAGTCTGGCTCTGG
GGCAACTAGATATTCCATGCCAGAAGAAAAGGAGAGTGGCTATTTGGTGGCAAACGTGGC
AAAAGATCTGGGGCTCAGGGTTGGAGAACTGGCCACTAGAGGAGCTCAAATCCATTACAA
AGGAAACAAAGAGCTCTTGCAGATGGATGCAGAGACTGGGAATTTGTTCTTAAAGGAAAA
ACTAGACCGGGAGGCACTGTGTGGGGCGACAGAACCCTGTGTGCTGCACTTCCAGGTCAT
ACTGGAAAACCCTGTGCAGTTCTTCCAAACTGAACTGCAGCTCACTGATATAAACGACCA
CTCTCCAGAGTTCCCTGACAGGGAAATGCTTCTAAAAATCCCTGAGAACGCCCAGCCAGG
AACTGTGTTTCCTCTGAAGGCAGCCCAGGACTCTGACATAGGGAGCAATGCCGTTCAGAA
CTACACAGTCAGTCCCAACATCCATTTCCACGTCATTACTCACAGTCGCTCAGATGGCAG
GAAATACCCAGAGCTGGTGCTGGACAGAGCCCTGGACAGGGAGGAGCAGCCTGAGCTCAC
TTTAATCCTCACCGCTCTGGATGGGGGTGCTCCGCCTCGGTCAGGAACCACTATAGTTCA
CATTGAAGTCGTGGACATCAATGATAACGCCCCCCAGTTTATACAGTCACTCTATGAGGT
GCAGATTCTCGAAAATAGCCCCATTGATACCTTAGTTGTTACAGTCTCTGCCAGGGATTT
AGATTCTGGGATATATGGCAATGTAGCCTATTCTCTGTTTCAGGGTGATGGATTATCTCA
ACCATTTGTAATAGATGAAGTCACAGGAGAAATCCGTCTTAGCAAAGAGCTGGATTTCGA
GGGAATTAGCCATTATAACATAGAAATCGCAGCCACTGATGGGGGAGACCTTTTAGGAAA
ATGCACTGTGGTTATACAGGTGTTGGATGTGAATGACAACGCTCCAGAGTTGATGATCAG
GAAGCTCACAGTCCCTGTCCCGGAAAATTCCGCCGAGACTGTAGTTGCTGTTTTTAGTGT
TTCTGATTCTGATTCGGGGGACAACGGAAGGATAGTGTGTTCTATCCAGAACAATATTCC
ATTTCTCCTGAAACCCACGTTTGAGAATTACTACACCTTAGTGACCGAGGGGCCACTTGA
TAGAGAGAGCAGAGCTGAGTACAATATCACCATCACTGTCTGGGATTTGGGCACACCCAG
GCTCACAACCCAGCACACCATAACAGTGCAGGTGTCTGACATCAACGACAACGCCCCTGC
CTTCACACAAACCTCCTATACCCTGTTTGTGCAAGAGAACAACAGTCCCGCCCTGCAGAT
AGGCACCATCAGCGCCACAGACTCAGACTCAGGCTCCAATGCCCACATCACCTACTCGCT
GCTGCTGCCCCAAGACCCACAGCTGGCCCTTGCCTCGCTAATCTCCATTAACCCCGACAA
CGGGCAGCTGTTCGTACTCAGGGCACTGGACTATGAATCCCTGCAGGCCTTCGAGTTCCG
CGTAGGCGCCACAGACCAAGGCTCTCCTGCACTCAGCAGCCAGACTCTGGTGCGCGTGGT
GGTGCTGGATGACAATGACAATGCGCCCTTCGTGCTCTACCCGATGCAGAACGCCTCTGC
GCCTTGCACAGAGCTGCTGCCCAGGGAGGCGGAGTCTGGCTACCTGGTCACCAAGGTGGT
GGCTGTGGATCGCGACTCTGGCCAGAATGCTTGGCTGTCGTTCCAGTTGCTCAAGGCCAC
GGAGCCCGGGCTGTTCAGCGTGTGGGCGCACAATGGCGAGGTGCGCACCACCAGGCTGCT
GAGCGAGCGCGATGTGCCCAAGCACAGGCTGCTGCTGCTGGTCAAGGACAATGGCGAGCC
TCAGCTCTCTGCCAGTGTCACACTTCAAGTGCTACTGGTGAATAGTTTTTCTCAGCCCTA
CCTTTCTCTGCCTGAGGTGGCACAGGACCCCATTCAGGAGGATGGAGAGATGCTCACTCT
GTACCTGGTCATTGCCTTGGCTTCCGTGTCTTCGCTCTTCCTCTTGTCTGTCCTTATGTT
TGTGGGAATGAGGTTGTGCAGGAGGGCCAGGGAGGCTTCTCTGGGTGTCTGCTCTGTGCC
TGAGGGCCACTTCCCTGGCCACCTGATGGATGTTAGCGGAACTGGGACTCTGTCCCACAG
CTATCAGTATGATGTGTGTCTATCAGGAGACTCTAGGACTGGTGAGTTTAAATTCCTCAA
ACCCATGATTCCCAATGTAATGGTCCAGGAGGCTGGGAGAGAAGTGAAGGAAAATCCCCC
CTGCAGGGATAGCTTTGTATTCAGTTAGGGCCTCATGGGCCCAGCTTTCTTGTAC
Protein sequence predicted based on nucleotide sequence
METALAKMPEQRQVFFLTILLLLWKSGSGATRYSMPEEKESGYLVANVAKDLGLRVGELA TRGAQIHYKGNKELLQMDAETGNLFLKEKLDREALCGATEPCVLHFQVILENPVQFFQTE LQLTDINDHSPEFPDREMLLKIPENAQPGTVFPLKAAQDSDIGSNAVQNYTVSPNIHFHV ITHSRSDGRKYPELVLDRALDREEQPELTLILTALDGGAPPRSGTTIVHIEVVDINDNAP QFIQSLYEVQILENSPIDTLVVTVSARDLDSGIYGNVAYSLFQGDGLSQPFVIDEVTGEI RLSKELDFEGISHYNIEIAATDGGDLLGKCTVVIQVLDVNDNAPELMIRKLTVPVPENSA ETVVAVFSVSDSDSGDNGRIVCSIQNNIPFLLKPTFENYYTLVTEGPLDRESRAEYNITI TVWDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTLFVQENNSPALQIGTISATDSDSG SNAHITYSLLLPQDPQLALASLISINPDNGQLFVLRALDYESLQAFEFRVGATDQGSPAL SSQTLVRVVVLDDNDNAPFVLYPMQNASAPCTELLPREAESGYLVTKVVAVDRDSGQNAW LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPQLSASVTLQVL LVNSFSQPYLSLPEVAQDPIQEDGEMLTLYLVIALASVSSLFLLSVLMFVGMRLCRRARE ASLGVCSVPEGHFPGHLMDVSGTGTLSHSYQYDVCLSGDSRTGEFKFLKPMIPNVMVQEA GREVKENPPCRDSFVFS*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence
202
End on reference sequence
2595
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223.1
Synonyms:
pDONR-223.1, pENTR223-star-Sfi
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php
Size (bp):
4311
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (Sfi sites flank the cassette present only in no insert form)
1265
1277
bacterial origin
ori
bacterial origin of replication
1
534
negative selection marker
ccdB
ccdB (no insert form only; lost in with insert form)
1312
1617
primer site
M13 F
M13 forward primer for insert sequencing
1113
1129
primer site
T7
T7 Forward primer for insert sequencing
2902
2921
primer site
M13 reverse
M13 reverse primer for insert sequencing
2926
2942
recombination site
attL1
attL1 recombination site
1165
1264
recombination site
attL2
attL2 recombination site
2786
2885
selectable marker
CmR
chlR (no insert form only; lost in with insert form)
1959
2618
selectable marker
SpnR
spectinomycin resistance gene
3154
4164
