Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
9390c1BCt6p1
Keyword:
None
Species:
Ruegeria pomeroyi
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
C-terminal 6-His, TOPO
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
SpCD00298246
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1125nts
Open reading frame: 50 to 1174

CCTCTGAATAATTTTGTTTACTTTAGAAGGAGATATACATATGTCCCTTAAACTGGTGAA
GCTGGAGACCTTTAGCACGGAGTTCGTTTGCTTTGTTCGCGCAACTGCCGAAGATGGCGC
ACAGGGTTGGGGGCAAGTAGCTCCGTATTACGCGGACATTACAGCCCAGGTGTTGCATCG
CCAAGTTGCACCATATGCTCTTGGAATGGCGTGTGAGGATATCGACGCCATGCTCGATAT
AGTCCGTGACAGAGAACACAAATTCCCTGGCTCTTACCTGCGACGTGCAATGGGTGGGGT
AGATACCGCTCTGTGGGATATGCATGGACGCCGTGCGGGCAAACCCGTGTGCGTTTTAAT
TGGTGGCACGCCGGGTCCAGTAAGAGCGTATGGGAGTTCAATGAAGCGGGACATCACTCC
TCGTGATGAAGCAGCTCGCTTGGTGAGACTTCGAGACGAGCAGGGATTTGATGCGTTCAA
ATTTCGTATTGGCGCCGAAGTAGGTAGAGATCGTGATGAGTGGCCGGGCCGTACAGAAGA
AATCGTTCCCACCATGCGCCGTGCAATGGGTGATGACGTGGCGCTGCTCGTCGATGCTAA
TTCCTGTTACTCGCCTGCCCGGGCAATTGAGGTTGGGAGAATGCTGGAACAGCACGGAAT
TAGCCATTATGAGGAACCATGCCCTTACTGGGAGTTCGCGCAAACGAAAGAGGTAACCGA
CACTTTAGATCTGGATATCACAGGCGGTGAACAGGACTGTTTGATGGAGCGATGGCAAAC
GATGATTGCTGATCGGGTGGTCGACGTTCTTCAGCCGGATATATGCTATCTGGGGGGCCT
CTCTCGTACCTTACGCGTGGCCCGTATGGCAGAAGCGGCTGGTATGCCCATCACTCCGCA
CGCCGCAAACCTGAGTATGGTAACACTTTTTACCATGCATCTTCTGAGAGCGATACCAAA
TGCCGGAAAGTATTTAGAGTTCTCAATCGAGGGCCTGGACTACTATCCTTGGCAGCAAGG
TTTATTCACGTCCGATCCGTACCGGATTGAAGAAGGGCACGCAACCGTCACTGATGCGCC
AGGCTGGGGTGTTGACGTGAACCCGGATTGGCTGGCTCGTTCGGACTATCGCGTAAGCGA
GTTAGGAGAAGGGCATCATCACCATCACCACTGATCCGAATTCGAGCTCCGTCGACAAGC
TTGCAACCGCACTCGAGCACCAC

Protein sequence predicted based on nucleotide sequence

KLVKLETFSTEFVCFVRATAEDGAQGWGQVAPYYADITAQVLHRQVAPYALGMACEDIDA
MLDIVRDREHKFPGSYLRRAMGGVDTALWDMHGRRAGKPVCVLIGGTPGPVRAYGSSMKR
DITPRDEAARLVRLRDEQGFDAFKFRIGAEVGRDRDEWPGRTEEIVPTMRRAMGDDVALL
VDANSCYSPARAIEVGRMLEQHGISHYEEPCPYWEFAQTKEVTDTLDLDITGGEQDCLME
RWQTMIADRVVDVLQPDICYLGGLSRTLRVARMAEAAGMPITPHAANLSMVTLFTMHLLR
AIPNAGKYLEFSIEGLDYYPWQQGLFTSDPYRIEEGHATVTDAPGWGVDVNPDWLARSDY
RVSELGEGHHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 1125
Mutations:
None
Discrepancy:
"c48t,V16V;t51c,R17R;
g54a,A18A;g198t,R66R;
c333a,V111V;c334a,c336a,R112R;
c339g,A113A;c457a,c459a,R153R;
c462t,D154D;g465t,R155R;
g567t,P189P;c573g,R191R;
a579t,I193I;a645g,E215E;
t648c,F216F;t877c,g879t,L293L;
c898a,c900a,R300R;t906a,I302I;
a930g,E310E;t933c,F311F;
c973t,c975a,L325L;t978c,F326F;
"
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-9390c
Recommended expression in:
Not Applicable