Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
FLH223549.01F
Keyword:
None
Species:
Vibrio cholerae O1 biovar El Tor str. N16961
Type:
cDNA
Vector Name:
pANT7_cGST
Format:
FUSION
Source:
HIP
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
VcCD00035366
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 2574nts
Open reading frame: 1 to 2574
ATGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCTTTTATCACCCAT
GCTGTCGTGGTGGTGATGGGCGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATC
AGTAGCCGCTTGATGGCTCAAGAAGGACAACGCACTTCAGTTCAAACCTCCAGCTTGATT
CAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAGGACAGCACAGCCAAG
AACGCCAGTTTAATCAACGCACTTGTCAGCCGAGATTCGAGTCGGCTGGATGAATTCTTT
TCCAGTGTTGATGAACTTGAACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCAC
GACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACGGCATTGCCCAGCAAGAGCTG
AATAAGCTTATCCGCAGAGTGGCGATTAGTGGCAATTGGCACTTGGTTCAAACGCCCAGC
GAGGGAAAATCAGTCCATATTTTGATGCGTCGTTCATCGCTGATTGAAGCGGGAACCGGG
CAGGTTGTTGGGTATCTGTATGTAGGCATCGTACTCAATGATAACTTTGCGCTGTTGGAA
AATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTCCTTGCCGTGGATACTACGCCGCTG
GTTTCTACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGCGCCAAA
GATGCTATGCGAGACAGCTTTATTGTTGGGCAAACCTTCTTAGAAGTGGAAAGTGTACCG
ACCTATCTGTGCGTCTACTCGATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAAT
TTCTATTTTTGGATGGCGTTTGCGCTGATCAGTATGATCGGTGTTTCCATAGCGTCACGC
TGGTGGCTACAAAAACGCATTCAGCGTGAAATTGAAACCTTGATGAATTACACCCATAAA
TTGATGGATCTGGATACGAAAAGTGAGTTTATCGGTTCAAAAATTTATGAGTTCGACTAT
TTTGGGCGAACGTTGGAACAATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAA
GATCTGTTTAACTTTGCGCTTTCACCGACCATGCTTTGGAATACCTCTGGTCGGCTGATC
CGCATGAACCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCACTAATGCGGCACAGGGCAATAAT
CCGAGTGACGTCACAACCGAAGTGGATGGTCGTGTGTACCGCTGGAACCTTTCACCGATC
ATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGCAAGATATCACCACCATCGCG
GAAGCGGAGAAGCAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGG
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGT
GTTTCCCAACTGCTAAAACGGACCCCACTCAATGATGAACAGCGCGAACACGTGGCTGTG
TTATGCAGCAGTGGTGAACATTTGCTCGCGGTGCTGAATGACATCTTGGATTTCTCACGC
TTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGTTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTAATGAAAAAGGCTTGGAACTGGTGGTGAAT
TCCAATATCACTACCGCAGCGATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTG
TTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAGGTTCGATACGTGTCGAATTG
CAATTAATTGAAGGTGATCCATTAGCTCAGCTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATCCGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAAGCTGAATCGACC
ACCACTCGAGAGTACGGCGGAAGTGGTTTAGGCTTAACGATTGTGCACAGTTTAGTGGAA
ATGCTCAGTGGTCAACTGCACGTCAGCTCCGAGTATGGCATTGGTACACGTTTTGAAATT
CAGTTACCGATTGAGCTGGTAGAAAAACCGGATGCGCCGCAGCAGTTGTTACCAGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACC
AATGCCTTTATTGCTCAAGCATTCTGTCGTAAATATGGCTTAGATGTGAGCTGGGTAACG
GATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACTACGACTTAGTGCTGATGGAT
AACCAGTTACCCTATTTGGATGGCGTTGAGACCACGCGCACCATCAAAAAAGTGCTGCAC
CTTCCGGTGGTGGTGTATGCCTGCACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTT
TTCCATGCGGGCGCGGAATATGTGTTAGTGAAGCCACTGAAAGAGCAGACTTTGCATAAA
GCGCTGGAGCATTTCAAACATCATCATGGCCAAAAAAACGCTGGCTTAAATTTG
Protein sequence predicted based on nucleotide sequence
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLI QSLFDFRLAALRIHQDSTAKNASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISSH DNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTPSEGKSVHILMRRSSLIEAGTG QVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAK DAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIGVSIASR WWLQKRIQREIETLMNYTHKLMDLDTKSEFIGSKIYEFDYFGRTLEQSFRRLANKEKQFE DLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFLFEILERQLLPTITNAAQGNN PSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSR LEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQIL FNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAEST TTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAP DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMD NQLPYLDGVETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHK ALEHFKHHHGQKNAGLNL
Coding Sequence Details
Insert Sequence Verified?:
N
Verification Method:
Insert was fully sequenced in parent vector
Reference Sequence Annotations:
Start on reference sequence
1
End on reference sequence
2574
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pANT7_cGST
Synonyms:
pANT7-cGST
Description:
with tag/fusion/marker assay, Gateway and reg, acceptor (destination), recombinational cloning clone, in vitro transcription expression with attR1 and NAP150 and ccdB and attR2 and GST and CmR and T7 and NAP138 and ColE and AmpR ampicillin resistance in bacterial
Comments:
One in a series of pANT7 vectors made by A. Lau and N. Ramachandran for use with NAPPA arrays. Can be used for cell free expression of the gene insert using human IVTT from Thermo Fisher or rabbit reticulocyte systems
Size (bp):
5964
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Joshua LaBaer
Al Lau
Niroshan Ramachandran
Al Lau
Niroshan Ramachandran
Publications:
PMID:
15232106
Title: Self-assembling protein microarrays
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 bacterial origin of replication
3931
3249
death cassette
ccdB
ccdB death cassette present in 'empty vector' form only (replace with gene of interest)
1876
2085
primer
NAP138
NAP138 reverse sequencing primer 5? TGTTTCGCCATTTATCACCTTC 3?
2405
2384
primer
NAP150
Forward sequencing primer NAP150 5?-CCC ATT GTA TGG GAT CTG ATC-3?
388
408
promoter
T7
T7 transcriptional start sequence
5940
5964
recombination site
attR1
AttR1 site for recombination in empty vector
549
565
recombination site
attR2
AttR2 site for recombination in empty vector
2236
2251
selectable marker
CmR
chloramphenicol resistance
782
1438
selectable marker
AmpR
ampicillin resistance gene
4688
4029
tag
GST
Glutathione transferase (GST) tag
2282
2950
