Ta0085m (Thermoplasma acidophilum) in pSGX4

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
9271d2BSt2p1
Keyword:
full-length cds
Species:
Thermoplasma acidophilum
Type:
cDNA
Vector Name:
pSGX4
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified. High number of silent and/or missense mutations in CDS. Reference sequence corrected.
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
TaCD00370106
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1194nts
Open reading frame: 51 to 1244

AGGATAACGATATTATTGAGGCTCACAGAGAACAGATTGGTGGATCCCTTAATTCTACCA
TCAAAAACATAGAGATAATAGAGATGGGAGAAAAATCGCGTGAGACTTCCTCTCCCTGGA
GTTCAACGATTTTGCTTGTGAAGATAACAAGCGCTGACGGACTTGTCGGATATGGCGAAG
CACCGACGACACTCATGACGCTTCCGGTGCTTGAGAGCATGAAGGAAGTTGCAAGGGTCT
TCAACGGAAAGGACTTCTTCAATGTGGAACGCAACGTTTTCGACTTTTACAGAAATTCGT
TCTACCTTCCTGTGTCCATGGAGGCGACCTCAGCATTGAGCGCATTCGAAATAGCCTCAT
GGGATTTGATAGGAAAGCAGCTTGGTACTCCAGTGTACAAGCTTCTGGGCGGAGAAGTAA
ACCAGAAGATGAGGGCCTATGCCAATGGCTGGTACAATGACTGCGTATCGCCAGATGACT
TCCTCAAGAAGGCAAAGGAAGTTGTGAAGATGGGATTCACAGCAATGAAGTTTGATCCCT
TCGGTGATAACTACGATTCAATAACAAACGACGGCATAGAGAATGCCAGAAACATAGTTG
GAACGCTCAGATCCGAGCTTGGTGATAAGGTAGACCTGTTGATCGAATACCATGGCAGGT
TTTCGAAGATAGCAGCCATAAAGGCCGGCATGGCTCTGGAGGAATACCATCCGTTCTTTT
ACGAGGAACCCCTGCATCCTGACCTTGATCACGACCTGCTAGATCTGAAGAACTACTACA
GGGTTCCGATAGCGCTTGGGGAAAGAGTACTTAACAAGAAGATATTTGCTAGGTTCATCT
CACAGAAACTGGTTGACATAATACAGCCAGATCTTACCAACTCAGGAGGCATACTGGAGG
GAAAGAAGATAGCCGCTATCGCAGATGGCTTCGGTATACCTGTAGCGCCGCACAACGCAT
TCGGGCCCATACAGACCGCAGCAACGCTGAATCTGGATACTACCATAACCAACTTCATAA
TACAGGAGAGCTTTGAAATGTTCTGGCCAGATTGGAAGAAGAAGCTCGTGTCCTCTGGCT
ATAAGCTCGAGAATGGATACTTCACGCTGACCAACGAGCCTGGCGTATGCAAGGTTAACG
AGGACATCGTTGAAAAATATCAGGTTTCAGGTATGGAACCATTCGATGATAAGGAACCTC
CATGGGTTGTCTCTGGTACATTCAAGCCATACCGACAAAAATAA

Protein sequence predicted based on nucleotide sequence

NSTIKNIEIIEMGEKSRETSSPWSSTILLVKITSADGLVGYGEAPTTLMTLPVLESMKEV
ARVFNGKDFFNVERNVFDFYRNSFYLPVSMEATSALSAFEIASWDLIGKQLGTPVYKLLG
GEVNQKMRAYANGWYNDCVSPDDFLKKAKEVVKMGFTAMKFDPFGDNYDSITNDGIENAR
NIVGTLRSELGDKVDLLIEYHGRFSKIAAIKAGMALEEYHPFFYEEPLHPDLDHDLLDLK
NYYRVPIALGERVLNKKIFARFISQKLVDIIQPDLTNSGGILEGKKIAAIADGFGIPVAP
HNAFGPIQTAATLNLDTTITNFIIQESFEMFWPDWKKKLVSSGYKLENGYFTLTNEPGVC
KVNEDIVEKYQVSGMEPFDDKEPPWVVSGTFKPYRQK*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Tested_Not_Purified
SolubleProtein: Tested_Not_Soluble
Find experimental protocols in NYSGXRC-9271d
Recommended expression in:
Not Applicable