DNASU Plasmid | TXNDC3 (Homo sapiens) in pJP1563 (retroviral expression vector)

Explanation of Terms

Gene:

Gene Symbol: NME8

Gene Name: NME/NM23 family member 8

Original Clone ID:

FLH224095.01L

Keyword:

None

Species:

Homo sapiens

Type:

cDNA

Vector Name:

pJP1563

Format:

FUSION

Source:

HIP

Description:

None

Comments:

None

Mutation / Discrepancy:

No / No

Publications:

None

Authors:

HsCD00039168

Price:

AVAILABLE

No restriction
Special MTA: None

Insert Sequence
Protein Sequence

Insert sequence: 1767nts

Open reading frame: 1 to 1767

Reference Sequence Alignment

ATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGACAGTCATCAATAATCAAAGCCTGTGG
GATGAGATGTTGCAGAACAAAGGCTTAACAGTGATTGATGTTTACCAAGCCTGGTGTGGA
CCTTGCAGAGCAATGCAACCTTTATTCAGAAAATTGAAAAATGAACTGAACGAAGACGAA
ATTCTGCATTTTGCTGTCGCAGAAGCTGACAACATTGTGACTTTGCAGCCATTTAGAGAT
AAATGTGAACCTGTTTTTCTCTTTAGTGTTAATGGCAAAATTATCGAAAAGATTCAGGGT
GCAAATGCACCGCTTGTTAATAAAAAAGTTATTAATTTGATCGATGAGGAGAGAAAAATT
GCAGCAGGTGAAATGGCTCGACCTCAGTATCCTGAAATTCCATTAGTAGACTCAGATTCA
GAAGTTAGTGAAGAATCACCATGTGAAAGTGTTCAGGAATTATACAGTATTGCTATTATC
AAACCGGATGCTGTGATTAGTAAAAAAGTTCTAGAAATTAAAAGAAAAATTACCAAAGCT
GGATTTATTATAGAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTC
TATAGTCGAATAGCAGACCAGCGTGACTTCGAAGAGTTTGTCTCTTTTATGACAAGTGGC
TTAAGCTATATTCTAGTTGTATCTCAAGGAAGTAAACACAATCCTCCCTCTGAAGAAACC
GAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCC
CAGGTTACACCTGGAATGATGAAGAACAAACAAGACAGTTTACAAGAATATCTGGAAAGA
CAACATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGCTAAGTTCATG
GATGCTTTCTTCCCCGATTTTAAAAAAATGAAAAGCATGAAATTAGAAAAGACATTGGCA
TTACTTCGACCAAATCTCTTTCATGAAAGGAAAGATGATGTTTTGCGTATTATTAAAGAT
GAAGACTTCAAAATACTGGAGCAAAGACAAGTAGTATTATCGGAAAAAGAAGCACAAGCA
CTGTGCAAGGAATATGAAAATGAAGACTATTTTAATAAACTTATAGAAAACATGACCAGT
GGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTA
CTGGGACCAAGAACTGTTGAAGAAGCCATTGAATATTTTCCAGAGAGTTTATGTGCACAG
TTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCT
GAAAGGGAAATACAGCATTTCTTTCCTCTTCAAAGCACTTTAGGCTTGATTAAACCTCAT
GCAACAAGTGAACAAAGAGAGCAGATCCTGAAGATAGTTAAGGAGGCTGGATTTGATCTG
ACACAGGTGAAGAAAATGTTCCTAACTCCTGAGCAAACTGAGAAAATTTATCCAAAAGTA
ACAGGAAAAGACTTTTATAAAGATTTATTGGAAATGTTATCTGTGGGTCCATCTATGGTC
ATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGAC
CCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAGCCCAGTTTGGAATAAGTAAA
TTGAAAAACATTGTCCATGGAGCATCTAACGCCTATGAAGCAAAAGAGGTTGTTAATAGA
CTCTTTGAGGATCCTGAGGAAAACTTG

Protein sequence predicted based on nucleotide sequence

MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDE
ILHFAVAEADNIVTLQPFRDKCEPVFLFSVNGKIIEKIQGANAPLVNKKVINLIDEERKI
AAGEMARPQYPEIPLVDSDSEVSEESPCESVQELYSIAIIKPDAVISKKVLEIKRKITKA
GFIIEAEHKTVLTEEQVVNFYSRIADQRDFEEFVSFMTSGLSYILVVSQGSKHNPPSEET
EPQTDTEPNERSEDQPEVEAQVTPGMMKNKQDSLQEYLERQHLAQLCDIEEDAANVAKFM
DAFFPDFKKMKSMKLEKTLALLRPNLFHERKDDVLRIIKDEDFKILEQRQVVLSEKEAQA
LCKEYENEDYFNKLIENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQ
FAMDSLPVNQLYGSDSLETAEREIQHFFPLQSTLGLIKPHATSEQREQILKIVKEAGFDL
TQVKKMFLTPEQTEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAVAEWRRLMGPTD
PEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPEENL

Coding Sequence Details

Insert Sequence Verified?:

Verification Method:

Insert was fully sequenced in parent vector; Verification by restriction enzyme digest

Reference Sequence Annotations:

End on reference sequence 2139

Start on reference sequence 373

Mutations:

None

Discrepancy:

None

5' Linker Sequence:

None

3' Linker Sequence:

None

Recommended Growth Condition:

Distributed in bacterial strain:

DH5-alpha T1 phage resistant

Antibiotic Selection:

Host Type: bacterial    Marker: ampicillin
Host Type: mammalian    Marker: blasticidin
Host Type: bacterial    Marker: chloramphenicol

Bacterial Selection Condition: 100 ug/mL ampicillin, 34 ug/mL chloramphenicol

Growth Condition: Growth with the double antibiotic in LB supplemented with 7% sucrose at 37 degrees is recommended.

Comments: Conditions for Creator-type vectors in with insert (recombined) form. Selection differs for the unrecombined, empty form of the vectors.

Protein Expression Results:

None

Recommended expression in:

Not Applicable

Vector Name:

pJP1563

Synonyms:

Sequencing Primer:

Forward: JPO113

Reverse: Unknown

Description:

Retroviral expression vector with CMV promoter, MMV-type 5p and 3p LTRs; amp resistance (blasticidin for mammalian selection); recombinational cloning.

Comments:

One in a series of pJP# vectors that includes puroR, blastR, hygR vectors made by J. Pearlberg at HIP

Size (bp):

7692

Parent Vector:

None

Properties:

Creator, acceptor (destination), loxP, mammalian expression, mammalian transduction, retroviral vector

Author Name:

Ed Harlow
Joseph Pearlberg

Publications:

None

Vector Map:

Vector Sequence:

Sequence:

AAGCTTGCATGCCTGCAGGTCGACTCTAGGCACATAAAGAAAAACATAACTAACCAAGCTGCAGCCGAGACAGTGAAAAGAACCGTTAAAACGGTTTGTTTTAAATAAACTGAATTATTTAGAGTCATTTCTTTGGTAGGAAAGTACATTGGCACGTAAAGGAGCCCAAAGCAATCTGTGGAAAGCCCAGGCTGGGAGCCCAGCAGTTTGCATCCCCTCCTGGCGTGTACCTAAGGGTTTCTTAATTGTGTGGTTTCTAAATCTTCCAGAGGGTTTGTCTCATTCACTTCCACTTCGGTGCACAATACTTGGACGCGGATTTACTGTCTTAGCATCTATCGGTGGCCCTTCGATTGAGGCTGAACCTGAGGCCCACTTCTTCAGCTTGTTAAGGAGAGCACAAGCACCAGAAGAGGCTGACCCGGCAGACCTGTGGGCATTTTTAACAAGGGCCTCCTGGGTCTGTGGGAGGCAGGCTTACATAAGGTGCAAATTAGAAATATAAATAATAAGCCCATATCAATTTGTCATCTTTTTTTAAGCTCAAGTTTTGAAAGACCCCACCTGTAGGTTTGGCAAGCTAGCTTAAGTAACGCCATTTTGCAAGGCATGGAAAATACATAACTGAGAATAGAGAAGTTCAGATCAAGGTTAGGAACAGAGAGACAGCAGAATATGGGCCAAACAGGATATCTGTGGTAAGCAGTTCCTGCCCCGCTCAGGGCCAAGAACAGTTGGAACAGGAGAATATGGGCCAAACAGGATATCTGTGGTAAGCAGTTCCTGCCCCGGCTCAGGGCCAAGAACAGATGGTCCCCAGATGCGGTCCCGCCCTCAGCAGTTTCTAGAGAACCATCAGATGTTTCCAGGGTGCCCCAAGGACCTGAAATGACCCTGTGCCTTATTTGAACTAACCAATCAGTTCGCTTCTCGCTTCTGTTCGCGCGCTTCTGCTCCCCGAGCTCAATAAAAGAGCCCACAACCCCTCACTCGGCGCGCCAGTCCTCCGATAGACTGCGTCGCCCGGGTACCCGTGTTCTCAATAAACCCTCTTGCAGTTGCATCCGACTCGTGGTCTCGCTGTTCCTTGGGAGGGTCTCCTCTGAGTGATTGACTACCCGTCAGCGGGGTCTTTCATTTGGAGGTTCCACCGAGATTTGGAGACCCCTGCCCAGGGACCACCGACCCCCCCGCCGGGAGGTAAGCTGGCCAGCAACTTATCTGTGTCTGTCCGATTGTCTAGTGTCTATGACTGATTTTATGCGCCTGCGTCGGTACTAGTTAGCTAACTAGCTCTGTATCTGGCGGACCCGTGGTGGAACTGACGAGTTCGGAACACCCGGCCGCAACCCTGGGAGACGTCCCAGGGACTTCGGGGGCCGTTTTTGTGGCCCGACCTGAGTCCTAAAATCCCGATCGTTTAGGACTCTTTGGTGCACCCCCCTTAGAGGAGGGATATGTGGTTCTGGTAGGAGACGAGAACCTAAAACAGTTCCCGCCTCCGTCTGAATTTTTGCTTTCGGTTTGGGACCGAAGCCGCGCCGCGCGTCTTGTCTGCTGCAGCATCGTTCTGTGTTGTCTCTGTCTGACTGTGTTTCTGTATTTGTCTGAAAATATGGGCCCGGGCTAGACTGTTACCACTCCCTTAAGTTTGACCTTAGGTCACTGGAAAGATGTCGAGCGGATCGCTCACAACCAGTCGGTAGATGTCAAGAAGAGACGTTGGGTTACCTTCTGCTCTGCAGAATGGCCAACCTTTAACGTCGGATGGCCGCGAGACGGCACCTTTAACCGAGACCTCATCACCCAGGTTAAGATCAAGGTCTTTTCACCTGGCCCGCATGGACACCCAGACCAGGTCCCCTACATCGTGACCTGGGAAGCCTTGGCTTTTGACCCCCCTCCCTGGGTCAAGCCCTTTGTACACCCTAAGCCTCCGCCTCCTCTTCCTCCATCCGCCCCGTCTCTCCCCCTTGAACCTCCTCGTTCGACCCCGCCTCGATCCTCCCTTTATCCAGCCCTCACTCCTTCTCTAGGCGCCCCCATATGGCCATATGAGATCTTATATGGGGCACCCCCGCCCCTTGTAAACTTCCCTGACCCTGACATGACAAGAGTTACTAACAGCCCCTCTCTCCAAGCTCACTTACAGGCTCTCTACTTAGTCCAGCACGAAGTCTGGAGACCTCTGGCGGCAGCCTACCAAGAACAACTGGACCGACCGGTGGTACCTCACCCTTACCGAGTCGGCGACACAGTGTGGGTCCGCCGACACCAGACTAAGAACCTAGAACCTCGCTGGAAAGGACCTTACACAGTCCTGCTGACCACCCCCACCGCCCTCAAAGTAGACGGCATCGCAGCTTGGATACACGCCGCCCACGTGAAGGCTGCCGACCCCGGGGGTGGACCATCCTCTAGACTGCCATGGCCAAGCCTTTGTCTCAAGAAGAATCCACCCTCATTGAAAGAGCAACGGCTACAATCAACAGCATCCCCATCTCTGAAGACTACAGCGTCGCCAGCGCAGCTCTCTCTAGCGACGGCCGCATCTTCACTGGTGTCAATGTATATCATTTTACTGGGGGACCTTGTGCAGAACTCGTGGTGCTGGGCACTGCTGCTGCTGCGGCAGCTGGCAACCTGACTTGTATCGTCGCGATCGGAAATGAGAACAGGGGCATCTTGAGCCCCTGCGGACGGTGCCGACAGGTGCTTCTCGATCTGCATCCTGGGATCAAAGCCATAGTGAAGGACAGTGATGGACAGCCGACGGCAGTTGGGATTCGTGAATTGCTGCCCTCTGGTTATGTGTGGGAGGGCTAAGCGGCCGCCTCCGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTATTGGCCATTGCATACGTTGTATCCATATCATAATATGTACATTTATATTGGCTCATGTCCAACATTACCGCCATGTTGACATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGGGTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCCGCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCATAGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGCCCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTACGCCCCCTATTGACGTCAATGACGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTATGGGACTTTCCTACTTGGCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACATCAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGTCAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAACAACTCCGCCCCATTGACGCAAATGGGCGGTAGGCATGTACGGTGGGAGGTCTATATAAGCAGAGCTCGTTTAGTGAACCGTCAGATCGCCTGGAGACGCCATCCACGCTGTTTTGACCTCCATAGAAGACACCGGGACCGATCCAGCCTCCGCGGCCCCAAGCTTATAACTTCGTATAGCATACATTATACGAAGTTATAGATCCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTTCGAGGATCCGGATTAGTCCAATTTGTTAAAGACAGGATATCAGTGGTCCAGGCTCTAGTTTTGACTCAACAATATCACCAGCTGAAGCCTATAGAGTACGAGCCATAGATAAAATAAAAGATTTTATTTAGTCTCCAGAAAAAGGGGGGAATGAAAGACCCCACCTGTAGGTTTGGCAAGCTAGCTTAAGTAACGCCATTTTGCAAGGCATGGAAAATACATAACTGAGAATAGAGAAGTTCAGATCAAGGTTAGGAACAGAGAGACAGCAGAATATGGGCCAAACAGGATATCTGTGGTAAGCAGTTCCTGCCCCGCTCAGGGCCAAGAACAGTTGGAACAGGAGAATATGGGCCAAACAGGATATCTGTGGTAAGCAGTTCCTGCCCCGGCTCAGGGCCAAGAACAGATGGTCCCCAGATGCGGTCCCGCCCTCAGCAGTTTCTAGAGAACCATCAGATGTTTCCAGGGTGCCCCAAGGACCTGAAATGACCCTGTGCCTTATTTGAACTAACCAATCAGTTCGCTTCTCGCTTCTGTTCGCGCGCTTCTGCTCCCCGAGCTCAATAAAAGAGCCCACAACCCCTCACTCGGCGCGCCAGTCCTCCGATAGACTGCGTCGCCCGGGTACCCGTGTTCTCAATAAACCCTCTTGCAGTTGCATCCGACTCGTGGTCTCGCTGTTCCTTGGGAGGGTCTCCTCTGAGTGATTGACTACCCGTCAGCGGGGTCTTTCAGTTTCTCCCACCTACACAGGTCTCACTAACATTCCTGATGTGCCGCAGGGACTCCGTCAGCCCGGTTTTTGTTTATAATAAAATGCAAGAACAGTGTTCCCTTCAAGCCAGACTACATCCTGACTCTCGGCTTTATAAAAGAATGTTGAAGGGCTCTGTGGACTATCTGCCACACGACTTTTTAAGATTTTTATGCCTCCTGGATGAGGGATTTAGTCAATCTATCCTCGTCTATTTTGCTGGCTTCTCCGTATTTTAAATTTCTAGTTTGCACTCCCTTCCTGAGAGCACGGCGATTGCAGAGTAGTTAATACTCTGAGGGCAGGCTTCTGTGAAAAGGTTGCCTGGGCTCAGTGTGAGATTTTGCCATAAAAAGGGGTCCTGCCCCTGTGTACAGACAGATCGGAATCTAGAGTGCATACTCAGAGTCCCCGCGGTTCCGGGGCTCTGATCTCAGGGCATCTTTGCCTAGAGATCCTCTACGCCGGACGCATCGTGGCCCTCGAATTAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCGTCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATTCAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGCC

Vector Features:

Type

Name

Description

Start

End

gene fragment

gag/pol/env

non-functional gag/pol/env for packaging efficiency

1871

2644

primer site

PBSQ

primer binding site (glytamine tRNA primer binding site)

1140

1156

promoter

bacterial

bacterial promoter (for chlR ORF in Creator-type inserts)

3677

3803

recombination site

LoxP

LoxP site for recombinational cloning

3651

3684

selectable marker

BlastR

blasticidin resistance gene (blasticidin S deaminase)

2428

2823

selectable marker

AmpR

ampicillin resistance gene (beta-lactamase)

6237

7094

viral LTR

5p LTR

5p viral LTR (MPSV U3, R, U5)

550

1139

viral LTR

3p LTR

3p viral LTR (MPSV U3, R, U5)

3962

4551

Gene

Gene Symbol :

NME8

Symbol Nomenclature :

NME8

SYNONYM :

CILD6; NM23-H8; SPTRX2; TXNDC3; sptrx-2

Designation :

sperm-specific thioredoxin 2|spermatid-specific thioredoxin-2|thioredoxin domain containing 3 (spermatozoa)|thioredoxin domain-containing protein 3

Full Nomenclature :

NME/NM23 family member 8

GENEID :

51314

HGNC :

16473

MIM :

607421

Vega :

OTTHUMG00000023716

Target GenBank:

BC036816

Reference Sequence Alignment

  

HsCD00039168      ATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGACAGTCATCAATAATCAAAGCCTGTGG
NM_016616.4       ATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGACAGTCATCAATAATCAAAGCCTGTGG
                  ************************************************************

HsCD00039168      GATGAGATGTTGCAGAACAAAGGCTTAACAGTGATTGATGTTTACCAAGCCTGGTGTGGA
NM_016616.4       GATGAGATGTTGCAGAACAAAGGCTTAACAGTGATTGATGTTTACCAAGCCTGGTGTGGA
                  ************************************************************

HsCD00039168      CCTTGCAGAGCAATGCAACCTTTATTCAGAAAATTGAAAAATGAACTGAACGAAGACGAA
NM_016616.4       CCTTGCAGAGCAATGCAACCTTTATTCAGAAAATTGAAAAATGAACTGAACGAAGACGAA
                  ************************************************************

HsCD00039168      ATTCTGCATTTTGCTGTCGCAGAAGCTGACAACATTGTGACTTTGCAGCCATTTAGAGAT
NM_016616.4       ATTCTGCATTTTGCTGTCGCAGAAGCTGACAACATTGTGACTTTGCAGCCATTTAGAGAT
                  ************************************************************

HsCD00039168      AAATGTGAACCTGTTTTTCTCTTTAGTGTTAATGGCAAAATTATCGAAAAGATTCAGGGT
NM_016616.4       AAATGTGAACCTGTTTTTCTCTTTAGTGTTAATGGCAAAATTATCGAAAAGATTCAGGGT
                  ************************************************************

HsCD00039168      GCAAATGCACCGCTTGTTAATAAAAAAGTTATTAATTTGATCGATGAGGAGAGAAAAATT
NM_016616.4       GCAAATGCACCGCTTGTTAATAAAAAAGTTATTAATTTGATCGATGAGGAGAGAAAAATT
                  ************************************************************

HsCD00039168      GCAGCAGGTGAAATGGCTCGACCTCAGTATCCTGAAATTCCATTAGTAGACTCAGATTCA
NM_016616.4       GCAGCAGGTGAAATGGCTCGACCTCAGTATCCTGAAATTCCATTAGTAGACTCAGATTCA
                  ************************************************************

HsCD00039168      GAAGTTAGTGAAGAATCACCATGTGAAAGTGTTCAGGAATTATACAGTATTGCTATTATC
NM_016616.4       GAAGTTAGTGAAGAATCACCATGTGAAAGTGTTCAGGAATTATACAGTATTGCTATTATC
                  ************************************************************

HsCD00039168      AAACCGGATGCTGTGATTAGTAAAAAAGTTCTAGAAATTAAAAGAAAAATTACCAAAGCT
NM_016616.4       AAACCGGATGCTGTGATTAGTAAAAAAGTTCTAGAAATTAAAAGAAAAATTACCAAAGCT
                  ************************************************************

HsCD00039168      GGATTTATTATAGAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTC
NM_016616.4       GGATTTATTATAGAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTC
                  ************************************************************

HsCD00039168      TATAGTCGAATAGCAGACCAGCGTGACTTCGAAGAGTTTGTCTCTTTTATGACAAGTGGC
NM_016616.4       TATAGTCGAATAGCAGACCAGTGTGACTTCGAAGAGTTTGTCTCTTTTATGACAAGTGGC
                  ********************* **************************************

HsCD00039168      TTAAGCTATATTCTAGTTGTATCTCAAGGAAGTAAACACAATCCTCCCTCTGAAGAAACC
NM_016616.4       TTAAGCTATATTCTAGTTGTATCTCAAGGAAGTAAACACAATCCTCCCTCTGAAGAAACC
                  ************************************************************

HsCD00039168      GAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCC
NM_016616.4       GAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCC
                  ************************************************************

HsCD00039168      CAGGTTACACCTGGAATGATGAAGAACAAACAAGACAGTTTACAAGAATATCTGGAAAGA
NM_016616.4       CAGGTTACACCTGGAATGATGAAGAACAAACAAGACAGTTTACAAGAATATCTGGAAAGA
                  ************************************************************

HsCD00039168      CAACATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGCTAAGTTCATG
NM_016616.4       CAACATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGCTAAGTTCATG
                  ************************************************************

HsCD00039168      GATGCTTTCTTCCCCGATTTTAAAAAAATGAAAAGCATGAAATTAGAAAAGACATTGGCA
NM_016616.4       GATGCTTTCTTCCCCGATTTTAAAAAAATGAAAAGCATGAAATTAGAAAAGACATTGGCA
                  ************************************************************

HsCD00039168      TTACTTCGACCAAATCTCTTTCATGAAAGGAAAGATGATGTTTTGCGTATTATTAAAGAT
NM_016616.4       TTACTTCGACCAAATCTCTTTCATGAAAGGAAAGATGATGTTTTGCGTATTATTAAAGAT
                  ************************************************************

HsCD00039168      GAAGACTTCAAAATACTGGAGCAAAGACAAGTAGTATTATCGGAAAAAGAAGCACAAGCA
NM_016616.4       GAAGACTTCAAAATACTGGAGCAAAGACAAGTAGTATTATCGGAAAAAGAAGCACAAGCA
                  ************************************************************

HsCD00039168      CTGTGCAAGGAATATGAAAATGAAGACTATTTTAATAAACTTATAGAAAACATGACCAGT
NM_016616.4       CTGTGCAAGGAATATGAAAATGAAGACTATTTTAATAAACTTATAGAAAACATGACCAGT
                  ************************************************************

HsCD00039168      GGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTA
NM_016616.4       GGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTA
                  ************************************************************

HsCD00039168      CTGGGACCAAGAACTGTTGAAGAAGCCATTGAATATTTTCCAGAGAGTTTATGTGCACAG
NM_016616.4       CTGGGACCAAGAACTGTTGAAGAAGCCATTGAATATTTTCCAGAGAGTTTATGTGCACAG
                  ************************************************************

HsCD00039168      TTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCT
NM_016616.4       TTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCT
                  ************************************************************

HsCD00039168      GAAAGGGAAATACAGCATTTCTTTCCTCTTCAAAGCACTTTAGGCTTGATTAAACCTCAT
NM_016616.4       GAAAGGGAAATACAGCATTTCTTTCCTCTTCAAAGCACTTTAGGCTTGATTAAACCTCAT
                  ************************************************************

HsCD00039168      GCAACAAGTGAACAAAGAGAGCAGATCCTGAAGATAGTTAAGGAGGCTGGATTTGATCTG
NM_016616.4       GCAACAAGTGAACAAAGAGAGCAGATCCTGAAGATAGTTAAGGAGGCTGGATTTGATCTG
                  ************************************************************

HsCD00039168      ACACAGGTGAAGAAAATGTTCCTAACTCCTGAGCAAACTGAGAAAATTTATCCAAAAGTA
NM_016616.4       ACACAGGTGAAGAAAATGTTCCTAACTCCTGAGCAAATAGAGAAAATTTATCCAAAAGTA
                  ************************************* :*********************

HsCD00039168      ACAGGAAAAGACTTTTATAAAGATTTATTGGAAATGTTATCTGTGGGTCCATCTATGGTC
NM_016616.4       ACAGGAAAAGACTTTTATAAAGATTTATTGGAAATGTTATCTGTGGGTCCATCTATGGTC
                  ************************************************************

HsCD00039168      ATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGAC
NM_016616.4       ATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGAC
                  ************************************************************

HsCD00039168      CCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAGCCCAGTTTGGAATAAGTAAA
NM_016616.4       CCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAGCCCAGTTTGGAATAAGTAAA
                  ************************************************************

HsCD00039168      TTGAAAAACATTGTCCATGGAGCATCTAACGCCTATGAAGCAAAAGAGGTTGTTAATAGA
NM_016616.4       TTGAAAAACATTGTCCATGGAGCATCTAACGCCTATGAAGCAAAAGAGGTTGTTAATAGA
                  ************************************************************

HsCD00039168      CTCTTTGAGGATCCTGAGGAAAACTTG
NM_016616.4       CTCTTTGAGGATCCTGAGGAAAACTAA
                  *************************:.