Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
9236e2BCt21p1
Keyword:
full-length cds
Species:
Unknown
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified.
Mutation / Discrepancy:
No / Yes
Publications:
PMID: 20088583
Title: The hunt for 8-oxoguanine deaminase.
Authors:
PSI
New York SGX Research Center for Structural Genomics
UnCD00430268
Price: 
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1461nts
Open reading frame: 51 to 1511

TTCCTCTGAATATTTTGTTTACTTTAGAAGGAGATATACATATGTCCCTTGGCGCGGATA
GAAGAGGTGAACGTATGAATCTGGAGCAGCATGCCGGTGCACGTGCTCCGAACACATCCT
CGAGTCGTCCAAAAACGTTATTGGTGAAGCACGCGGACGTTCTTGTCACTATGGATGACA
CACGCCGGGAACTCCGCGATGCCGGTCTGTATATTGAGGACAATAGAATCGTAGCAGTGG
GCCCTTCAGCTGAACTGCCCGAAACCGCGGATGAGGTTTTAGATTTGCGAGGGCATCTTG
TCATACCGGGACTGGTAAACACGCACCATCACATGTACCAATCCCTCACTCGGGCCGTGC
CAGCAGCTCAGAATGCGGAACTGTTTGGCTGGTTAACAAACCTGTATAAAATTTGGGCCC
ATTTGACCCCTGAGATGATCGAAGTTTCGACGCTTACCGCAATGGCTGAACTGCTCCAAA
GCGGGTGCACTACTAGCAGTGACCACTTATACATTTATCCGAATGGATCACGCCTGGATG
ACTCCATCGGCGCGGCCCAGAGAATAGGTATGCGATTCCATGCATCGCGTGGGGCGATGA
GCGTCGGACAGCGCGATGGCGGTTTGCCCCCGGACTCTGTGGTAGAGCGGGAACCAGATA
TTCTTCGTGATACGCAACGCCTGATCGAGACCTACCACGACGAAGGCCGTTATGCTATGT
TACGCGTTGTGGTCGCCCCTTGTAGTCCGTTTTCAGTTTCCAGAGATCTGATGCGAGACG
CAGCGGTACTCGCCAGAGAGTACGGTGTGTCGCTGCATACTCACTTGGCCGAGAACGTCA
ATGATATTGCATATAGCCGTGAAAAATTCGGGATGACACCCGCGGAGTATGCTGAAGATC
TTGGATGGGTTGGCCATGACGTGTGGCATGCCCACTGCGTACAGCTGGATGACGCAGGTA
TAGGGTTATTTGCGCGCACCGGCACGGGTGTCGCCCATTGTCCGTGCTCTAACATGCGTC
TGGCAAGTGGAATCGCGCCAGTTAAGAAAATGCGCCTCGCTGGCGTGCCTGTAGGTTTGG
GGGTTGATGGCTCAGCCTCCAATGACGGTGCGCAAATGGTGGCTGAAGTCCGGCAGGCAC
TGCTTTTACAGCGTGTTGGATTCGGCCCGGATGCCATGACCGCTCGGGAAGCTCTGGAAA
TTGCAACTCTGGGTGGGGCCAAAGTGCTCAACAGAGATGACATCGGAGCGTTGAAGCCAG
GCATGGCTGCAGATTTTGCCGCGTTCGACCTTCGACAACCGTTATTTGCTGGTGCACTGC
ACGATCCCGTAGCCGCACTTGTCTTCTGTGCTCCTAGCCAGACAGCATACACGGTTGTGA
ATGGGAAAGTAGTCGTTCGTGAAGGCCGCCTCGCCACCTTGGATTTACCGCCAGTGATTG
AGCGGCATAACGCTCTGGCTCATGCGTTGGTAGAAGCCGCGCGTGAAGGGCATCATCACC
ATCACCACTGATCCGAATTCGAGCTCCGTC

Protein sequence predicted based on nucleotide sequence

GADRRGERMNLEQHAGARAPNTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRI
VAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYK
IWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASR
GAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDL
MRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLD
DAGIGLFARTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEV
RQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDDIGALKPGMAADFAAFDLRQPLFA
GALHDPVAALVFCAPSQTAYTVVNGKVVVREGRLATLDLPPVIERHNALAHALVEAAREG
HHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
c66a,T22T;a67t,g68c,S23S;
t72g,S24S;ins@443,1;
t445g,del@447,1;t744c,A248A;
c745a,g747a,R249R;a750g,E250E;
g1134t,A378A;c1137g,R379R;
g1140a,E380E;g1287a,A429A;
g1290t,L430L;g1404t,A468A;
a1416g,A472A;c1417t,t1419g,L473L
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-9236e
Recommended expression in:
Not Applicable