Gene:
Gene Symbol:
fadD
Gene Name:
long-chain-fatty-acid CoA ligase
Original Clone ID:
6146e1BCt4b1
Keyword:
full-length cds
Species:
Aquifex aeolicus
Type:
cDNA
Vector Name:
pSGX3
Format:
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified.
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
New York SGX Research Center for Structural Genomics
AaCD00432995
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AVAILABLE
No restriction
Special MTA: PSI
Special MTA: PSI
Insert sequence: 2493nts
Open reading frame: 51 to 2543
CTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACATATGTCCCTTGAATTTTTGA
GGGATTTCGGGAAAACTGCTTTAATTCATCAAGGAAACGAAATCTCCTACGCTGAACTCC
TCGAAAATATAGCCTCTTTCGCAAACTTAATGGACATAACGCCTAACGAAAGAGTAGGCA
TAGTAATGGAAAATAGACCCGAATGGGTTTACGCCTTTTACGGAACGTGGAAAAAGGGTG
GAATAGTCGTTCCCATAGACTTTATGTCAACTCCTCAAGAGATAAGGTACATTCTTGAAG
ACGCAGAACCTTCAATAATTTTCTGTTCAGATGAAACTTATCCGAGGGTCAGGGAAGCCT
CTGAAGATTTGAAAGTAGAAATCGTAAACGTGGACAACCTTGTACTACCCACTCCGTGGG
AAGGTATAGTGAGGAGAGATGAAGACGATGTAGCCGTTCTTCCTTACACCTCTGGAACTA
CGGGAAATCCAAAAGGTGTTATGCTTACCTTCAAAAACCTCATGTCAAATATAAGAGGTG
TATCGGAGGTAGGAATAGCGGGAAAGGAAGACAAAACCCTCGCCATTCTCCCCTTCCACC
ATATGTACCCGCTTATGACTACTATGTTATTGCCTCTTTACCTTGGTGCAACGGTAGTTT
TTCTGGATAAGTTAACACCGGAAGACATAATCGAGAAACTTCAGAAGTACCAGATAACCG
TTTTAATAGGTGTTCCGAGGCTTTACCAGCTCTTCCACAGAAGGATTATGGAGGAGATAA
ACAAAAACGTTCTCGCGAAAAATTTATTTAAATTAATGAAAAAAGTTAAAAACCAGAAAA
TAAGAAAAACGGTTTTTAAAAAAGTTCACGATGCCTTTGGTGGAAGGATAAAGTACATGG
TAAGCGGAGGGGCAAAACTACCTCTGGATATCGCCCAGGACTTAACAACACTCGGGTTTA
CCGTAATAGAAGGCTACGGACTCACGGAAACCTCTCCGATAGTTTCTTTTAATCCTCCGA
ACAGAATAAAACTGGGCTCGGTGGGTGTACCGATAAAAGGCGTTGAAGTGATGACCACGA
GTGAAGGGGAAATCATTGTTCGCGGAGACAACGTAATGAAGGGGTACTGGAAAAAACCCG
AAGAAACTCAAAAGGTAATAATAAACGGTTGGTTCTACACGGGAGATCTCGGAGAGATAG
ACGAAGAAGGATATATATACATAACGGGAAGGAAGAAAGAAATAATAGTCCTCGGAAGCG
GTAAGAACGTATTCCCGGAGGAAATAGAGAGTAAAATCCTTGCAAAAGCTCCATACATAA
AGGAAGTCGGGGTTTTTGAAAAAGATGGCAAGCTCCTCGCTTTAATTTACCCCGATTTTG
AAAAAGTTAAAGAATTAGGAATAACTAATCTGGAAGAAACGATAAAGTGGGAAGTAATAG
ACAAAGTAAACAGGGAACTCCCGGAGTGGAAGAGGGTAGTCGGGTTCAAAATCGTGAAAA
CGGAACTTCCCAAAACTAGACTGGGGAAACTGAGGAGATTTTTGCTTCCGCAAATTTACG
AAAAGGCTGAAGAAATAAAAGAAGAAAAAACGGAGGATTACAGCGTATTTGAAACGGAGG
AAGGAAGAATAATAAAGGAATTTCTTGAAAAAATTTCTCAGAAGGAAGTAAAACCCGGAG
ATCACCTCGAAATTGACTTGGGGCTTGATTCCCTTGCTAAGGTAGAACTTCTTGGATTTA
TAGAGACAAACTTCGGAGTCAGTCTTTCGGAAGAGGAATTGTCAAAAAATTTAGTGGTAA
AGGACCTCATAGAACTCGTTCGCAGTAAGAAAAAAAGTGTGGATACTAAAGAAGTTTCCT
GGAAAGATATACTCACAAAGGCAAAGCCTTACGAGCTTTACCACTACCCCCTCATCTTTG
AACTCGGAAGAAAGCTTTTAAAACTTTACTTCAAGCTATACCACAGGATAGACGTGAGAG
GTCTTGAAAACCTGCCCAAGCCTCCCTTTATAATTGCACCAAATCACCAGAGCTATTTAG
ACGCCTTCGCCATAGCCGCTGTTCTTCCAAAGGAAATAGCCCACGAAACTTACTTTTTAG
GAGACGAAACCTACTTCAGAAATCCAATAACTTCAACCTTCGGTAAACTCGCTCACGTCA
TCACAGTAAACGTAAACAAAGGTTTAAAAGAATCCCTCCAGAAAACCGCTTACGCCTTGA
TGTCGGGAAAAGTAGTGGTGATCTTTCCCGAGGGTGCGCGGACGAGGACAGAAGAATTAA
TGGAATTCAAAAAAGGAGTCGCCATACTCGCCAGAGAACTTGGTGTTCCAATAGTTCCCG
TTGCAATAGAAGGGGCTTACGAAGCTTGGTCCGTTTACGACAAGTTCCCGAAACCTAAAA
AGATAAAAATAATGTTCGGAAAGCCTGTAGATCCGGACGAGAAGTCTTACGAAGAAATTA
CAAAGGAACTCTACGAGTGGATTAAGAGTATGCTTGAGTTTTTAAAGAAAGAAAGTGAAG
GGCATCATCACCATCACCACTGATCCGAATTCGAGCTCCGTCGAC
Protein sequence predicted based on nucleotide sequence
EFLRDFGKTALIHQGNEISYAELLENIASFANLMDITPNERVGIVMENRPEWVYAFYGTW KKGGIVVPIDFMSTPQEIRYILEDAEPSIIFCSDETYPRVREASEDLKVEIVNVDNLVLP TPWEGIVRRDEDDVAVLPYTSGTTGNPKGVMLTFKNLMSNIRGVSEVGIAGKEDKTLAIL PFHHMYPLMTTMLLPLYLGATVVFLDKLTPEDIIEKLQKYQITVLIGVPRLYQLFHRRIM EEINKNVLAKNLFKLMKKVKNQKIRKTVFKKVHDAFGGRIKYMVSGGAKLPLDIAQDLTT LGFTVIEGYGLTETSPIVSFNPPNRIKLGSVGVPIKGVEVMTTSEGEIIVRGDNVMKGYW KKPEETQKVIINGWFYTGDLGEIDEEGYIYITGRKKEIIVLGSGKNVFPEEIESKILAKA PYIKEVGVFEKDGKLLALIYPDFEKVKELGITNLEETIKWEVIDKVNRELPEWKRVVGFK IVKTELPKTRLGKLRRFLLPQIYEKAEEIKEEKTEDYSVFETEEGRIIKEFLEKISQKEV KPGDHLEIDLGLDSLAKVELLGFIETNFGVSLSEEELSKNLVVKDLIELVRSKKKSVDTK EVSWKDILTKAKPYELYHYPLIFELGRKLLKLYFKLYHRIDVRGLENLPKPPFIIAPNHQ SYLDAFAIAAVLPKEIAHETYFLGDETYFRNPITSTFGKLAHVITVNVNKGLKESLQKTA YALMSGKVVVIFPEGARTRTEELMEFKKGVAILARELGVPIVPVAIEGAYEAWSVYDKFP KPKKIKIMFGKPVDPDEKSYEEITKELYEWIKSMLEFLKKESEGHHHHHH*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
SolubleProtein: Protein_Soluble
ProteinPurified: Tested_Not_Purified
Find experimental protocols in NYSGXRC-6146e
Recommended expression in:
Not Applicable
Vector Name:
pSGX3
Synonyms:
pSGX-3, pSGX3_BC
Sequencing Primer:
Forward:
T7
Reverse:
T7 terminator
Description:
Bacterial (E. coli) expression vector with T7 promoter, adds C-terminal 6xHis tag; kanamycin resistance; TOPO cloning.
Comments:
Modified from pET26b from Novagen
Size (bp):
5339
Parent Vector:
None
Properties:
TOPO Cloning, bacterial expression, in vitro transcription, with tag/fusion/marker
Author Name:
New York SGX Research Center for Structural Genomics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
ATG start
start
initiation start (Met, Ser, Leu)
5072
5079
TOPO recognition site
TOPO
TOPO cloning site
5076
5085
bacterial origin
ori
pBR322-type bacterial origin of replication
1421
2103
gene fragment
ROP
ROP
2527
2703
promoter
T7
T7 promoter
4983
5003
repressor protein gene
LacI
LacI CDS
3515
4531
selectable marker
KanR
kanamycin resistance gene
563
1375
tag
His
6xHis tag
5086
5103
trxn regulatory element
lac operator
lac operator
5003
5025
trxn termination sequence
T7 term
T7 terminator
5231
5307
