PHF16 (Homo sapiens) in pLX304

Explanation of Terms

Gene:
Gene Symbol:  JADE3
Gene Name:  jade family PHD finger 3
Original Clone ID:
ccsbBroad304_14027
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pLX304
Format: 
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
HsCD00443621
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 2471nts
Open reading frame: 1 to 2471

ATGAAACGCCATAGGCCTGTCAGCAGCAGTGACAGTTCAGACGAAAGTCCTTCCACTTCC
TTTACTTCTGGCTCAATGTATAGGATCAAGTCAAAAATTCCAAATGAACACAAGAAACCT
GCTGAGGTATTCCGGAAGGACCTCATCAGTGCCATGAAACTTCCAGATTCTCACCACATT
AATCCTGATAGCTATTACCTCTTTGCTGATACATGGAAGGAAGAATGGGAAAAGGGAGTC
CAGGTACCAGCCAGTCCAGACACCGTTCCACAGCCTTCTCTCAGGATTATAGCTGAGAAG
GTAAAGGACGTTCTGTTTATCCGACCCCGGAAGTATATTCACTGCTCCAGCCCAGACACC
ACAGAGCCTGGCTACATCAACATCATGGAGTTGGCAGCATCTGTTTGCCGCTATGACCTA
GATGACATGGACATCTTCTGGCTTCAGGAACTCAATGAAGACCTTGCAGAAATGGGTTGT
GGGCCAGTTGATGAGAATCTTATGGAAAAGACAGTAGAAGTCCTGGAACGCCATTGCCAT
GAAAATATGAACCATGCTATTGAGACAGAGGAAGGGCTAGGCATAGAGTATGATGAAGAT
GTGATCTGTGATGTGTGCCGGTCTCCAGACAGTGAAGAAGGGAATGATATGGTGTTCTGT
GATAAGTGTAACGTCTGTGTGCATCAGGCCTGCTATGGCATCCTCAAGGTCCCAGAAGGC
AGCTGGCTGTGTCGCTCCTGTGTCCTGGGCATTTATCCGCAATGTGTGTTATGTCCAAAG
AAAGGTGGAGCCCTGAAGACCACCAAGACAGGGACTAAATGGGCTCATGTCAGCTGTGCC
CTGTGGATCCCAGAGGTCAGCATTGCTTGTCCTGAGAGGATGGAACCGATCACGAAGATC
TCCCACATCCCACCCAGTCGGTGGGCCTTAGTCTGCAACTTGTGCAAGTTGAAGACGGGG
GCTTGTATTCAGTGCTCTATAAAAAGCTGCATCACTGCCTTCCACGTCACCTGTGCCTTT
GAGCACGGCCTAGAGATGAAGACCATCCTAGATGAGGGAGACGAAGTGAAGTTCAAGTCA
TATTGCCTCAAGCATAGCCAAAACAGGCAGAAACTTGGAGAAGCTGAGTACCCCCACCAC
AGGGCTAAAGAGCAGAGCCAGGCCAAAAGTGAGAAAACCAGCCTGCGGGCACAGAAGCTT
CGGGAGCTGGAGGAGGAGTTCTATTCCTTGGTACGAGTGGAAGATGTGGCCGCAGAGCTG
GGTATGCCCACGCTAGCTGTGGACTTTATCTATAACTACTGGAAACTGAAGCGGAAAAGT
AACTTCAATAAGCCATTATTTCCTCCAAAGGAGGATGAAGAAAATGGGCTGGTGCAGCCA
AAAGAGGAAAGCATTCACACTCGAATGAGAATGTTTATGCATCTACGCCAGGACCTGGAG
AGGGTCCGAAATCTGTGCTATATGATAAGCAGACGAGAGAAGCTGAAGCTGTCACACAAC
AAAATACAGGAACAGATCTTCGGTTTGCAAGTCCAGCTTCTTAACCAAGAAATTGATGCA
GGGCTTCCTTTGACAAATGCACTTGAAAACTCACTGTTTTACCCACCACCAAGAATTACC
TTGAAGTTAAAAATGCCCAAATCAACCCCAGAAGACCACAGAAACAGCTCCACAGAAACC
GATCAGCAGCCCCACTCTCCTGACAGCAGCTCATCTGTTCACAGTATAAGGAACATGCAG
GTGCCTCAGGAGTCACTAGAAATGAGAACAAAATCGTATCCGAGATACCCACTAGAGAGC
AAGAATAACCGTTTGCTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGT
CCTGCTTGGAGAACCCCGTCCTCGGAGTGCTATCATGGGCAGTCACTGGGAAAGCCTCTG
GTCCTTCAGGCTGCCCTCCATGGACAGTCTTCCATTGGGAATGGGAAAAGTCAGCCTAAC
TCCAAGTTTGCCAAATCCAATGGCCTGGAGGGCAGCTGGTCTGGGAATGTCACCCAAAAA
GACAGCTCGAGTGAGATGTTCTGTGACCAGGAGCCTGTGTTCAGCCCCCACTTGGTCAGT
CAGGGCAGCTTTAGAAAATCCACTGTAGAACACTTTAGTAGGTCCTTTAAAGAGACCACC
AATAGGTGGGTGAAGAACACAGAGGACCTCCAGTGCTATGTGAAGCCAACCAAGAATATG
AGCCCCAAGGAGCAGTTCTGGGGTAGACAGGTTCTCAGGCGGTCTGCAGGGAGAGCTCCA
TATCAGGAAAATGATGGCTATTGCCCAGATTTGGAGCTGAGTGATTCAGAGGCAGAAAGT
GATGGGAATAAAGAAAAAGTCAGGGTAAGGAAAGATAGCTCAGACAGGGAAAATCCTCCC
CATGACTCTAGACGGGATTGCCATGGTAAAAGCAAGACACATCCCCTTTCCCCACAGTTC
AATGCAAAGG

Protein sequence predicted based on nucleotide sequence

MKRHRPVSSSDSSDESPSTSFTSGSMYRIKSKIPNEHKKPAEVFRKDLISAMKLPDSHHI
NPDSYYLFADTWKEEWEKGVQVPASPDTVPQPSLRIIAEKVKDVLFIRPRKYIHCSSPDT
TEPGYINIMELAASVCRYDLDDMDIFWLQELNEDLAEMGCGPVDENLMEKTVEVLERHCH
ENMNHAIETEEGLGIEYDEDVICDVCRSPDSEEGNDMVFCDKCNVCVHQACYGILKVPEG
SWLCRSCVLGIYPQCVLCPKKGGALKTTKTGTKWAHVSCALWIPEVSIACPERMEPITKI
SHIPPSRWALVCNLCKLKTGACIQCSIKSCITAFHVTCAFEHGLEMKTILDEGDEVKFKS
YCLKHSQNRQKLGEAEYPHHRAKEQSQAKSEKTSLRAQKLRELEEEFYSLVRVEDVAAEL
GMPTLAVDFIYNYWKLKRKSNFNKPLFPPKEDEENGLVQPKEESIHTRMRMFMHLRQDLE
RVRNLCYMISRREKLKLSHNKIQEQIFGLQVQLLNQEIDAGLPLTNALENSLFYPPPRIT
LKLKMPKSTPEDHRNSSTETDQQPHSPDSSSSVHSIRNMQVPQESLEMRTKSYPRYPLES
KNNRLLASLSHSRSEAKESSPAWRTPSSECYHGQSLGKPLVLQAALHGQSSIGNGKSQPN
SKFAKSNGLEGSWSGNVTQKDSSSEMFCDQEPVFSPHLVSQGSFRKSTVEHFSRSFKETT
NRWVKNTEDLQCYVKPTKNMSPKEQFWGRQVLRRSAGRAPYQENDGYCPDLELSDSEAES
DGNKEKVRVRKDSSDRENPPHDSRRDCHGKSKTHPLSPQFNAK

Coding Sequence Details

Insert Sequence Verified?:
N
Verification Method:
Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
>4 errors; >4 non-synonomous errors;
 insertion or deletion in coding sequence
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition: 100 ug/mL ampicillin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable