SCAF8 (Homo sapiens) in pLX304

Explanation of Terms

Gene:
Gene Symbol:  SCAF8
Gene Name:  SR-related CTD-associated factor 8
Original Clone ID:
ccsbBroad304_07805
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pLX304
Format: 
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
HsCD00446115
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 3814nts
Open reading frame: 1 to 3814

ATGGAGGCCGTGAAGACCTTCAATAGCGAGTTGTATTCCCTGAATGACTATAAACCACCC
ATTTCGAAAGCGAAAATGACCCAAATTACTAAGGCAGCCATCAAAGCTATTAAGTTCTAT
AAACATGTGGTACAGAGTGTTGAGAAGTTTATTCAGAAATGTAAACCAGAATACAAAGTA
CCTGGACTTTATGTTATTGACTCCATTGTGCGACAATCCCGACATCAGTTTGGTCAAGAA
AAGGATGTGTTTGCACCCAGATTTAGTAATAACATCATTAGCACTTTCCAGAATTTATAT
CGTTGCCCTGGGGATGACAAGAGTAAAATAGTGAGAGTACTAAACTTATGGCAGAAGAAT
AATGTATTTAAGAGTGAGATTATTCAGCCCCTTTTGGATATGGCAGCCGGGATTCCGCCT
CCAGTTGTCACACCTGTTTTGGCCAGCACTACCACTGCTATGAGCAATACTCCAGGAACT
CCTGTGACACCTGTTACTCCGGCCAATGTGGTCCAAGGCTTACCTGATCCGTGGGTATCT
CAGATAACAAATACAGATACACTTGCGGCTGTAGCTCAGATCTTGCAAAGTCCTCAAGGC
CAGCAGCTTCAACAATTAATACAAACCTTACAGATACAACAACAGAAGCCCCAGCCTTCC
ATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGTTGCAAGCTCTTACGGCACAACTT
ACAGCTGCAGCTGCAGCTGCCAACACTCTTACTCCCTTAGAACAGGGAGTCTCCTTTAAC
AAGAAGTTGATGGATAGGTTTGATTTTGGGGAAGACTCTGAGCATAGTGAAGAACCCAAA
AAGGAAATTCCAGCTTCACAACTTTCTCACGTTTCAGAATCTGTGAACATTTCCATTTTT
CATCAGATAGCAGAACAACTACAACAGCAAAACCTAGAACATCTCAGACAGCAGCTCTTG
GAGCAGCAACAGCCTCAAAAGGCCACTCCTCAGGATAGTCAGGAAGGAACCTTTGGGTCA
GAGCATTCAGCGTCACCATCACAAGGGAGTAGTCAGCAGCATTTTCTTGAACCTGAAGTC
AATTTGGATGATTCCATAGATATTCAGCAACAGGATATGGATATAGATGAAGGGCAAGAT
GGAGTGGAAGAGGAGGTCTTTGAACAAGAAGCTAAGAAAGTGGCGGTTCGCTCAAGATCA
AGAACACATTCACGATCTCGTTCAAGATCACCAAGAAAACGAAGGTCTAGGTCACGGTCT
GGCTCTAGAAAGCGTAAACACAGAAAGCGATCACGCTCCCGCTCAAGAGAAAGAAAGAGG
AAATCATCACGGTCGTATTCAAGTGAAAGGAGAGCCAGAGAAAGGGAGAAAGAACGACAG
AAAAAGGGATTACCTCCAATTAGATCTAAAACACTAAGTGTATGTAGTACTACTCTCTGG
GTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACCAACCTGTTTGAAGAGTTT
GGACAGATTGAATCCATTAATATGATTCCTCCCCGGGGCTGTGCTTATGTCTGCATGGTT
CATCGACAAGATGCATTTCGAGCTCTTCAGAAACTCAGTTCTGGATCATATAAAATTGGG
TCCAAGGTCATTAAGATCGCTTGGGCTTTAAACAAAGGTGTAAAAACAGAATACAAACAA
TTCTGGGATGTGGATCTTGGAGTTACATATATACCATGGGAAAAAGTTAAAGTGGATGAC
TTGGAAGGTTTTGCAGAAGGAGGCATGATTGATCAGGAGACTGTAAATACTGAGTGGGAA
ACTGTGAAAAGCTCAGAACCTGTTAAAGAGACGGTCCAGACAACTCAGAGCCCAACTCCA
GTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTCCCTCCTCCTGTTGCTATG
TTGCAGATTCCAGTGGCGCCAGCCGTGCCTACAGTTAGTTTAGTCCCACCAGCATTTCCT
GTGTCGATGCCGGTTCCTCCTCCTGGATTCAGTCCAATCCCTCCACCTCCTTTTTTAAGA
GCAAGTTTTAACCCTTCACAACCACCACCTGGTTTCATGCCGCCTCCAGTTCCCCCACCT
GTTGTGCCACCCCCTACGATTCCACCAGTAGTACCAACATCTTTAGTGCAGCCGTCATTA
TCCATGACACCGGAAACTGTGAAAGATGTTGGATTTGGTAGCCTTGTTATACCAGGCGGT
TCTGTTGCCAGCAATCTTGCTACTTCCGCTCTGCCAGCTGGAAATGTTTTTAATGCTCCA
ACTAAACAGGCAGAGCCTGAAGAAAAAGTACCTCATCTTATAGACCACCAGATTTCTTCT
GGTGAAAACACCAGATCAGTGATTCCAAATGATATTTCAAGTAATGCTGCAATTTTAGGA
GGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTA
TCAAGTAATTCTGAAATTCTTGGGGTCCGGCCATCTAATGTTTCCAGTAGTTCTGGGATT
ATTGCAGCCCAACCACCAAATATTCTAAATAACTCTGGAATATTGGGAATACAGCCACCC
AGTGTGTCAAATAGTTCTGGACTTTTGGGAGTGCTACCCCCAAATATACCTAACAATTCT
GGACTTGTAGGAGTACAGCCACCAAATGTTCCAAATACTCCTGGACTTCTGGGAACACAG
CCACCAGCTGGACCTCAAAACTTACCCCCTTTAAGTATCCCTAATCAAAGGATGCCCACA
ATGCCAATGTTAGACATTCGTCCGGGACTAATACCACAGGCACCTGGGCCAAGATTCCCT
TTAATACAGCCTGGAATTCCACCCCAACGGGGAATCCCACCCCCATCGGTACTTGATTCA
GCTCTTCATCCACCACCCCGTGGACCTTTTCCTCCAGGAGATATTTTTAGTCAACCAGAA
AGACCTTTTTTAGCTCCTGGAAGACAAAGCGTAGACAATGTTACTAACCCAGAAAAAAGG
ATACCACTTGGGAATGATAACATTCAACAGGAAGGAGATAGAGATTATCGGTTTCCTCCT
ATAGAAACCAGGGAAAGCATTAGTAGACCTCCCCCTGTGGATGTTAGAGATGTGGTTGGG
CGGCCTATAGATCCAAGAGAAGGTCCTGGACGGCCTCCACTAGATGGTAGGGATCATTTT
GGAAGACCTCCTGTAGATATAAGAGAGAATCTTGTGAGGCCAGGTATAGATCATCTTGGT
CGAAGAGACCACTTTGGCTTTAATCCAGAGAAGCCCTGGGGGCATAGAGGAGATTTTGAT
GAGAGAGAGCATCGGGTTCTACCGGTCTATGGTGGTCCAAAAGGCTTACATGAAGAAAGA
GGTAGATTTCGGTCTGGAAACTATCGATTTGATCCTAGAAGTGGTCCTTGGAACCGAGGA
TTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAAAGG
GATAGGGATGACAGAGATTTTGATTTCTGCAGAGAAATGAATGGAAATCGTCTTGGACGA
GACAGAATTCAAAACACTTGGGTTCCCCCTCCTCATGCTCGGGTTTTTGATTATTTTGAA
GGGGCCACTTCTCAACGAAAAGGTGATAATGTGCCTCAGGTTAATGGTGAAAATACAGAG
AGACATGCTCAGCCACCACCTATACCAGTACAGAATGATCCTGAACTTTATGAAAAACTG
ACATCTTCAAATGAAATAAACAAGGAGAAGAGTGACACAGTTGCTGATATAGAAAGTGAA
CCAGTGGTAGAAAGCACAGAAACTGAGGGGACA

Protein sequence predicted based on nucleotide sequence

MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNISIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEV
NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSL
SMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISS
GENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGI
IAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQ
PPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDS
ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP
IETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
RRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRG
FGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFE
GATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESE
PVVESTETEGT

Coding Sequence Details

Insert Sequence Verified?:
N
Verification Method:
Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  ampicillin
Host Type:  mammalian    Marker:  blasticidin
Bacterial Selection Condition: 100 ug/mL ampicillin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable