Gene:
Gene Symbol:
LOC100653137
Gene Name:
cadherin-23-like
Original Clone ID:
ccsbBroadEn_08824
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pENTR223
Format:
FUSION
Source:
The ORFeome Collaboration
Description:
Original GenBank Accession: BC032581.1
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
HsCD00506043
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
ATGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTTGGTGCTGATCTCTGGA
TGCTGGGGCCAGGTGAACCGGCTGCCCTTCTTCACCAACCACTTCTTTGATACATACCTG
CTGATCAGCGAGGACACGCCTGTGGGTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATG
GACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAGGCCTCTCGCTTCTTTGCAGTG
GAGCCTGACACTGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGAGACCAAGTCAGAG
TTCACCGTGGAGTTCTCTGTCAGCGACCACCAGGGGGTGATCACACGGAAGGTGAACATC
CAGGTCGGGGATGTGAATGACAACGCGCCCACATTTCACAATCAGCCCTACAGCGTCCGC
ATCCCTGAGAATACACCAGTGGGGACGCCCATCTTCATCGTGAATGCCACAGACCCCGAC
TTGGGGGCAGGGGGCAGCGTCCTCTACTCCTTCCAGCCCCCCTCCCAATTCTTCGCCATT
GACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGCTGGACTACGAGACCACACAGGCC
TACCAGCTCACGGTCAACGCCACAGATCAAGACAAGACCAGGCCTCTGTCCACCCTGGCC
AACTTGGCCATCATCATCACAGATGTCCAGGACATGGACCCCATCTTCATCAACCTGCCT
TACAGCACCAACATCTACGAGCATTCTCCTCCGGGCACGACGGTGCGCATCATCACCGCC
ATAGACCAGGATAAAGGACGTCCCCGGGGCATTGGCTACACCATCGTTTCAGGGAATACC
AACAGCATCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCTTGAATGGCCTGCTGGAC
CGGGAGAACCCCCTGTACAGCCATGGCTTCATCCTGACTGTGAAGGGCACGGAGCTGAAC
GATGACCGCACCCCATCTGACGCTACAGTCACCACGACCTTCAATATCCTGGTTATTGAC
ATCAATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAGCGTGGCCATCACTGAGCTG
GCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAGAATTTG
GGCCTGAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACCACTTCATCATC
TCCCCGACCTCCGTCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGAC
TACGAGACCGTGGACCGCTACGACTTTGATCTCTTTGCCAATGAGAGTGTGCCTGACCAT
GTGGGCTATGCCAAGGTGAAGATCACTCTCATCAATGAAAATGACAACCGGCCCATCTTC
AGCCAGCCACTGTACAACATCAGCCTGTACGAGAACGTCACCGTGGGGACCTCTGTGCTG
ACAGTCCTGGCAACTGACAATGATGCAGGCACCTTTGGGGAAGTCAGCTACTTCTTCAGT
GATGACCCTGACAGGTTCTCGCTGGACAAGGACACGGGACTCATCATGCTGATTGCCAGG
CTGGACTATGAGCTCATCCAGCGCTTCACCCTGACGATCATTGCCCGGGACGGGGGCGGC
GAGGAGACCACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAACGACAACGTGCCCACC
TTCCAGAAGGATGCCTACGTGGGTGCTCTGCGGGAGAACGAGCCTTCTGTCACACAGCTG
GTGCGGCTCCGGGCAACAGATGAAGACTCCCCTCCCAACAACCAGATCACCTACAGCATT
GTCAGTGCATCTGCCTTTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCTATGGAGTG
ATCAGCGTCAGTCGCCCCCTGGATTATGAACAGATATCCAATGGGCTGATTTATCTGACG
GTCATGGCCATGGATGCTGGCAACCCCCCTCTCAACAGCACCGTCCCTGTCACCATCGAG
GTGTTTGATGAGAATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACTTCGTCTCCGTG
GTGGAGAACATCATGGCAGGAGCCACGGTGCTGTTCCTGAATGCCACAGACCTGGACCGC
TCCCGGGAGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAGGCTCCACCCAGTTTCGG
ATCAATGCCCGCTCAGGGGAAATCACCACCACGTCTCTGCTTGACCGAGAGACCAAGTCT
GAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGC
ATCGCCACCGTAAACATCACCCTCCTGGACATCAACGACAACCACCCCACGTGGAAGGAC
GCACCCTACTACATCAACCTGGTGGAGATGACCCCTCCAGACTCTGACGTGACCACGGTG
GTGGCTGTTGACCCAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCATCCAGCCACCC
AACAAGTTCTACAGCCTCAACAGCACCACGGGCAAGATCCGCACCACCCACGCCATGCTG
GACCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGTT
ACTGACTGTGGCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTGTGAACCTC
TTGGATCTCAATGACAATGACCCCACCTTTCAGAACCTGCCTTTTGTGGCCGAGGTGCTT
GAAGGCATCCCGGCGGGGGTCTCCATCTACCAAGTGGTGGCCATCGACCTCGATGAGGGC
CTGAACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGCCCCGCATGGACTTCCTCATC
AACAGCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGGACCGCGAGCGCATCGCGGAG
TACCAGCTGCGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCACG
CTCACCATCCATGTGCTGGATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCGTGTAC
AATGTGTCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTGGTCTGGCTGAACTGCACG
GACAACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTCATCACAGGTGCTGCCCCGGCC
TCCGCCCACCTGTGCAGGCCTCCTGGGGCCCTGCCTCCACCCCTCCCAGATGGACAGCCA
GAC
Protein sequence predicted based on nucleotide sequence
MGRHVATSCHVAWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLAQDM DNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNI QVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSQFFAI DSARGIVTVIRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLP YSTNIYEHSPPGTTVRIITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGVLTLNGLLD RENPLYSHGFILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITEL AQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLD YETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVL TVLATDNDAGTFGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGG EETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSI VSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIE VFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFR INARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKD APYYINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKIRTTHAML DRENPDPHEAELMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVL EGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAE YQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCT DNDVGLNAELSYFITGAAPASAHLCRPPGALPPPLPDGQPD
Coding Sequence Details
Insert Sequence Verified?:
N
Verification Method:
Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223
Synonyms:
pDONR223, pENTR223-XnCDSYn
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php; also see supplemental figure 1 of the paper PubMed ID 15489335.
Size (bp):
2815
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Mark Vidal
Publications:
PMID:
15489335
Title: Human ORFeome Version 1.1: A Platform for Reverse Proteomics
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ori
bacterial origin of replication
2220
2753
gene fragment
pas
5p stem of pBR primose assembly site
63
73
gene fragment
pas prime
3p stem of pBR pas(L)
105
116
recombination site
attL1
attL1 recombination site
570
665
recombination site
attL2
attL2 recombination site
793
696
selectable marker
SpnR
spectinomycin resistance gene
1062
2072
trxn termination sequence
T1-T2
rrnBT1 and T2 terminators
510
224
