DNASU Plasmid | CDH6 (Homo sapiens) in pENTR223 (Gateway donor/master vector)

Explanation of Terms

Gene:

Gene Symbol: CDH6

Gene Name: cadherin 6, type 2, K-cadherin (fetal kidney)

Original Clone ID:

ccsbBroadEn_10724

Keyword:

None

Species:

Homo sapiens

Type:

cDNA

Vector Name:

pENTR223

Format:

FUSION

Source:

The ORFeome Collaboration

Description:

Original GenBank Accession: BC000019.2

Comments:

None

Mutation / Discrepancy:

No / No

Publications:

None

Authors:

Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration

HsCD00514350

Price:

AVAILABLE

No restriction
Special MTA: None

Insert Sequence
Protein Sequence

Insert sequence: 1990nts

Open reading frame: 1 to 1990

Reference Sequence Alignment

ATGAGAACTTACCGCTACTTCTTGCTGCTCTTTTGGGTGGGCCAGCCCTACCCAACTCTC
TCAACTCCACTATCAAAGAGGACTAGTGGTTTCCCAGCAAAGAAAAGGGCCCTGGAGCTC
TCTGGAAACAGCAAAAATGAGCTGAACCGTTCAAAAAGGAGCTGGATGTGGAATCAGTTC
TTTCTCCTGGAGGAATACACAGGATCCGATTATCAGTATGTGGGCAAGTTACATTCAGAC
CAGGATAGAGGAGATGGATCACTTAAATATATCCTTTCAGGAGATGGAGCAGGAGATCTC
TTCATTATTAATGAAAACACAGGCGACATACAGGCCACCAAGAGGCTGGACAGGGAAGAA
AAACCCGTTTACATCCTTCGAGCTCAAGCTATAAACAGAAGGACAGGGAGACCCGTGGAG
CCCGAGTCTGAATTCATCATCAAGATCCATGACATCAATGACAATGAACCAATATTCACC
AAGGAGGTTTACACAGCCACTGTCCCTGAAATGTCTGATGTCGGTACATTTGTTGTCCAA
GTCACTGCGACGGATGCAGATGATCCAACATATGGGAACAGTGCTAAAGTTGTCTACAGT
ATTCTACAGGGACAGCCCTATTTTTCAGTTGAATCAGAAACAGGTATTATCAAGACAGCT
TTGCTCAACATGGATCGAGAAAACAGGGAGCAGTACCAAGTGGTGATTCAAGCCAAGGAT
ATGGGCGGCCAGATGGGAGGATTATCTGGGACCACCACCGTGAACATCACACTGACTGAT
GTCAACGACAACCCTCCCCGATTCCCCCAGAGTACATACCAGTTTAAAACTCCTGAATCT
TCTCCACCGGGGACACCAATTGGCAGAATCAAAGCCAGCGATGCTGATGTGGGAGAAAAT
GCTGAAATTGAGTACAGCATCACAGACGGTGAGGGGCTGGATATGTTTGATGTCATCACC
GACCAGGAAACCCAGGAAGGGATTATAACTGTCAAAAAGCTCTTGGACTTTGAAAAGAAG
AAAGTGTATACCCTTAAAGTGGAAGCCTCCAATCCTTATGTTGAGCCACGATTTCTCTAC
TTGGGGCCTTTCAAAGATTCAGCCACGGTTAGAATTGTGGTGGAGGATGTAGATGAGCCA
CCTGTCTTCAGCAAACTGGCCTACATCTTACAAATAAGAGAAGATGCTCAGATAAACACC
ACAATAGGCTCCGTCACAGCCCAAGATCCAGATGCTGCCAGGAATCCTGTCAAGTACTCT
GTAGATCGACACACAGATATGGACAGAATATTCAACATTGATTCTGGAAATGGTTCGATT
TTTACATCGAAACTTCTTGACCGAGAAACACTGCTATGGCACAACATTACAGTGATAGCA
ACAGAGATCAATAATCCAAAGCAAAGTAGTCGAGTACCTCTATATATTAAAGTTCTAGAT
GTCAATGACAACGCCCCAGAATTTGCTGAGTTCTATGAAACTTTTGTCTGTGAAAAAGCA
AAGGCAGATCAGTTGATTCAGACCTTGCATGCTGTTGACAAGGATGACCCTTATAGTGGG
CACCAATTTTCGTTTTCCTTGGCCCCTGAAGCAGCCAGTGGCTCAAACTTTACCATTCAA
GACAACAAAGACAACACGGCGGGAATCTTAACTCGGAAAAATGGCTATAATAGACACGAG
ATGAGCACCTATCTCTTGCCTGTGGTCATTTCAGACAACGACTACCCAGTTCAAAGCAGC
ACTGGGACAGTGACTGTCCGGGTCTGTGCATGTGACCACCACGGGAACATGCAATCCTGC
CACGCGGAGGCGCTCATCCACCCCACGGGACTGAGCACGGGGGCTCTGGTTGCCATCCTT
CTGTGCATCGTGATCCTACTAGGTAAACTGGTTCTCCCTGCCTCCTATCTCCCCATGGTG
AGGGGCTCACACTGTTACTGTGACACTCTAGATTTATCTGCCTCCCCCATTAAGGCATAC
AGCCTGATC

Protein sequence predicted based on nucleotide sequence

MRTYRYFLLLFWVGQPYPTLSTPLSKRTSGFPAKKRALELSGNSKNELNRSKRSWMWNQF
FLLEEYTGSDYQYVGKLHSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREE
KPVYILRAQAINRRTGRPVEPESEFIIKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQ
VTATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKD
MGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKASDADVGEN
AEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEKKKVYTLKVEASNPYVEPRFLY
LGPFKDSATVRIVVEDVDEPPVFSKLAYILQIREDAQINTTIGSVTAQDPDAARNPVKYS
VDRHTDMDRIFNIDSGNGSIFTSKLLDRETLLWHNITVIATEINNPKQSSRVPLYIKVLD
VNDNAPEFAEFYETFVCEKAKADQLIQTLHAVDKDDPYSGHQFSFSLAPEAASGSNFTIQ
DNKDNTAGILTRKNGYNRHEMSTYLLPVVISDNDYPVQSSTGTVTVRVCACDHHGNMQSC
HAEALIHPTGLSTGALVAILLCIVILLGKLVLPASYLPMVRGSHCYCDTLDLSASPIKAY
SLI

Coding Sequence Details

Insert Sequence Verified?:

Verification Method:

Verified by the ORFeome collaboration

Mutations:

None

Discrepancy:

None

5' Linker Sequence:

None

3' Linker Sequence:

None

Recommended Growth Condition:

Distributed in bacterial strain:

DH5-alpha T1 phage resistant

Antibiotic Selection:

Host Type: bacterial Marker: spectinomycin

Bacterial Selection Condition: 100 ug/mL spectinomycin

Growth Condition: Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.

Comments: None

Protein Expression Results:

None

Recommended expression in:

Not Applicable

Vector Name:

pENTR223

Synonyms:

pDONR223, pENTR223-XnCDSYn

Sequencing Primer:

Forward: M13F

Reverse: M13R

Description:

Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.

Comments:

Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php; also see supplemental figure 1 of the paper PubMed ID 15489335.

Size (bp):

2815

Parent Vector:

None

Properties:

Gateway, donor (entry), recombinational cloning

Author Name:

Mark Vidal

Publications:

PMID: 15489335

Title: Human ORFeome Version 1.1: A Platform for Reverse Proteomics

Vector Map:

Vector Sequence:

Sequence:

CTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATACGCGTACCGCTAGCCAGGAAGAGTTTGTAGAAACGCAAAAAGGCCATCCGTCAGGATGGCCTTCTGCTTAGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCACAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCTTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTCGCGTTAACGCTAGCATGGATGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTCTTAAGCTCGGGCCCCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGCCAACTTTCTTGTACAAAGTTGGCATTATAAGAAAGCATTGCTTATCAATTTGTTGCAACGAACAGGTCACTATCAGTCAAAATAAAATCATTATTTGCCATCCAGCTGATATCCCCTATAGTGAGTCGTATTACATGGTCATAGCTGTTTCCTGGCAGCTCTGGCCCGTGTCTCAAAATCTCTGATGTTACATTGCACAAGATAAAAATATATCATCATGCCTCCTCTAGACCAGCCAGGACAGAAATGCCTCGACTTCGCTGCTACCCAAGGTTGCCGGGTGACGCACACCGTGGAAACGGATGAAGGCACGAACCCAGTGGACATAAGCCTGTTCGGTTCGTAAGCTGTAATGCAAGTAGCGTATGCGCTCACGCAACTGGTCCAGAACCTTGACCGAACGCAGCGGTGGTAACGGCGCAGTGGCGGTTTTCATGGCTTGTTATGACTGTTTTTTTGGGGTACAGTCTATGCCTCGGGCATCCAAGCAGCAAGCGCGTTACGCCGTGGGTCGATGTTTGATGTTATGGAGCAGCAACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTTAAACATCATGAGGGAAGCGGTGATCGCCGAAGTATCGACTCAACTATCAGAGGTAGTTGGCGTCATCGAGCGCCATCTCGAACCGACGTTGCTGGCCGTACATTTGTACGGCTCCGCAGTGGATGGCGGCCTGAAGCCACACAGTGATATTGATTTGCTGGTTACGGTGACCGTAAGGCTTGATGAAACAACGCGGCGAGCTTTGATCAACGACCTTTTGGAAACTTCGGCTTCCCCTGGAGAGAGCGAGATTCTCCGCGCTGTAGAAGTCACCATTGTTGTGCACGACGACATCATTCCGTGGCGTTATCCAGCTAAGCGCGAACTGCAATTTGGAGAATGGCAGCGCAATGACATTCTTGCAGGTATCTTCGAGCCAGCCACGATCGACATTGATCTGGCTATCTTGCTGACAAAAGCAAGAGAACATAGCGTTGCCTTGGTAGGTCCAGCGGCGGAGGAACTCTTTGATCCGGTTCCTGAACAGGATCTATTTGAGGCGCTAAATGAAACCTTAACGCTATGGAACTCGCCGCCCGACTGGGCTGGCGATGAGCGAAATGTAGTGCTTACGTTGTCCCGCATTTGGTACAGCGCAGTAACCGGCAAAATCGCGCCGAAGGATGTCGCTGCCGACTGGGCAATGGAGCGCCTGCCGGCCCAGTATCAGCCCGTCATACTTGAAGCTAGACAGGCTTATCTTGGACAAGAAGAAGATCGCTTGGCCTCGCGCGCAGATCAGTTGGAAGAATTTGTCCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGCAAATAACCCTCGAGCCACCCATGACCAAAATCCCTTAACGTGAGTTACGCGTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCATTGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTT

Vector Features:

Type

Name

Description

Start

End

bacterial origin

ori

bacterial origin of replication

2220

2753

gene fragment

pas

5p stem of pBR primose assembly site

gene fragment

pas prime

3p stem of pBR pas(L)

105

116

recombination site

attL1

attL1 recombination site

570

665

recombination site

attL2

attL2 recombination site

793

696

selectable marker

SpnR

spectinomycin resistance gene

1062

2072

trxn termination sequence

T1-T2

rrnBT1 and T2 terminators

510

224

Gene

Gene Symbol :

CDH6

Symbol Nomenclature :

CDH6

SYNONYM :

CAD6; KCAD

Designation :

cadherin-6

Full Nomenclature :

cadherin 6, type 2, K-cadherin (fetal kidney)

GENEID :

1004

HGNC :

1765

MIM :

603007

Vega :

OTTHUMG00000090673

Target GenBank:

None

Reference Sequence Alignment

  

HsCD00514350      ATGAGAACTTACCGCTACTTCTTGCTGCTCTTTTGGGTGGGCCAGCCCTACCCAACTCTC
NM_004932.3       ATGAGAACTTACCGCTACTTCTTGCTGCTCTTTTGGGTGGGCCAGCCCTACCCAACTCTC
                  ************************************************************

HsCD00514350      TCAACTCCACTATCAAAGAGGACTAGTGGTTTCCCAGCAAAGAAAAGGGCCCTGGAGCTC
NM_004932.3       TCAACTCCACTATCAAAGAGGACTAGTGGTTTCCCAGCAAAGAAAAGGGCCCTGGAGCTC
                  ************************************************************

HsCD00514350      TCTGGAAACAGCAAAAATGAGCTGAACCGTTCAAAAAGGAGCTGGATGTGGAATCAGTTC
NM_004932.3       TCTGGAAACAGCAAAAATGAGCTGAACCGTTCAAAAAGGAGCTGGATGTGGAATCAGTTC
                  ************************************************************

HsCD00514350      TTTCTCCTGGAGGAATACACAGGATCCGATTATCAGTATGTGGGCAAGTTACATTCAGAC
NM_004932.3       TTTCTCCTGGAGGAATACACAGGATCCGATTATCAGTATGTGGGCAAGTTACATTCAGAC
                  ************************************************************

HsCD00514350      CAGGATAGAGGAGATGGATCACTTAAATATATCCTTTCAGGAGATGGAGCAGGAGATCTC
NM_004932.3       CAGGATAGAGGAGATGGATCACTTAAATATATCCTTTCAGGAGATGGAGCAGGAGATCTC
                  ************************************************************

HsCD00514350      TTCATTATTAATGAAAACACAGGCGACATACAGGCCACCAAGAGGCTGGACAGGGAAGAA
NM_004932.3       TTCATTATTAATGAAAACACAGGCGACATACAGGCCACCAAGAGGCTGGACAGGGAAGAA
                  ************************************************************

HsCD00514350      AAACCCGTTTACATCCTTCGAGCTCAAGCTATAAACAGAAGGACAGGGAGACCCGTGGAG
NM_004932.3       AAACCCGTTTACATCCTTCGAGCTCAAGCTATAAACAGAAGGACAGGGAGACCCGTGGAG
                  ************************************************************

HsCD00514350      CCCGAGTCTGAATTCATCATCAAGATCCATGACATCAATGACAATGAACCAATATTCACC
NM_004932.3       CCCGAGTCTGAATTCATCATCAAGATCCATGACATCAATGACAATGAACCAATATTCACC
                  ************************************************************

HsCD00514350      AAGGAGGTTTACACAGCCACTGTCCCTGAAATGTCTGATGTCGGTACATTTGTTGTCCAA
NM_004932.3       AAGGAGGTTTACACAGCCACTGTCCCTGAAATGTCTGATGTCGGTACATTTGTTGTCCAA
                  ************************************************************

HsCD00514350      GTCACTGCGACGGATGCAGATGATCCAACATATGGGAACAGTGCTAAAGTTGTCTACAGT
NM_004932.3       GTCACTGCGACGGATGCAGATGATCCAACATATGGGAACAGTGCTAAAGTTGTCTACAGT
                  ************************************************************

HsCD00514350      ATTCTACAGGGACAGCCCTATTTTTCAGTTGAATCAGAAACAGGTATTATCAAGACAGCT
NM_004932.3       ATTCTACAGGGACAGCCCTATTTTTCAGTTGAATCAGAAACAGGTATTATCAAGACAGCT
                  ************************************************************

HsCD00514350      TTGCTCAACATGGATCGAGAAAACAGGGAGCAGTACCAAGTGGTGATTCAAGCCAAGGAT
NM_004932.3       TTGCTCAACATGGATCGAGAAAACAGGGAGCAGTACCAAGTGGTGATTCAAGCCAAGGAT
                  ************************************************************

HsCD00514350      ATGGGCGGCCAGATGGGAGGATTATCTGGGACCACCACCGTGAACATCACACTGACTGAT
NM_004932.3       ATGGGCGGCCAGATGGGAGGATTATCTGGGACCACCACCGTGAACATCACACTGACTGAT
                  ************************************************************

HsCD00514350      GTCAACGACAACCCTCCCCGATTCCCCCAGAGTACATACCAGTTTAAAACTCCTGAATCT
NM_004932.3       GTCAACGACAACCCTCCCCGATTCCCCCAGAGTACATACCAGTTTAAAACTCCTGAATCT
                  ************************************************************

HsCD00514350      TCTCCACCGGGGACACCAATTGGCAGAATCAAAGCCAGCGATGCTGATGTGGGAGAAAAT
NM_004932.3       TCTCCACCGGGGACACCAATTGGCAGAATCAAAGCCAGCGACGCTGATGTGGGAGAAAAT
                  ***************************************** ******************

HsCD00514350      GCTGAAATTGAGTACAGCATCACAGACGGTGAGGGGCTGGATATGTTTGATGTCATCACC
NM_004932.3       GCTGAAATTGAGTACAGCATCACAGACGGTGAGGGGCTGGATATGTTTGATGTCATCACC
                  ************************************************************

HsCD00514350      GACCAGGAAACCCAGGAAGGGATTATAACTGTCAAAAAGCTCTTGGACTTTGAAAAGAAG
NM_004932.3       GACCAGGAAACCCAGGAAGGGATTATAACTGTCAAAAAGCTCTTGGACTTTGAAAAGAAG
                  ************************************************************

HsCD00514350      AAAGTGTATACCCTTAAAGTGGAAGCCTCCAATCCTTATGTTGAGCCACGATTTCTCTAC
NM_004932.3       AAAGTGTATACCCTTAAAGTGGAAGCCTCCAATCCTTATGTTGAGCCACGATTTCTCTAC
                  ************************************************************

HsCD00514350      TTGGGGCCTTTCAAAGATTCAGCCACGGTTAGAATTGTGGTGGAGGATGTAGATGAGCCA
NM_004932.3       TTGGGGCCTTTCAAAGATTCAGCCACGGTTAGAATTGTGGTGGAGGATGTAGATGAGCCA
                  ************************************************************

HsCD00514350      CCTGTCTTCAGCAAACTGGCCTACATCTTACAAATAAGAGAAGATGCTCAGATAAACACC
NM_004932.3       CCTGTCTTCAGCAAACTGGCCTACATCTTACAAATAAGAGAAGATGCTCAGATAAACACC
                  ************************************************************

HsCD00514350      ACAATAGGCTCCGTCACAGCCCAAGATCCAGATGCTGCCAGGAATCCTGTCAAGTACTCT
NM_004932.3       ACAATAGGCTCCGTCACAGCCCAAGATCCAGATGCTGCCAGGAATCCTGTCAAGTACTCT
                  ************************************************************

HsCD00514350      GTAGATCGACACACAGATATGGACAGAATATTCAACATTGATTCTGGAAATGGTTCGATT
NM_004932.3       GTAGATCGACACACAGATATGGACAGAATATTCAACATTGATTCTGGAAATGGTTCGATT
                  ************************************************************

HsCD00514350      TTTACATCGAAACTTCTTGACCGAGAAACACTGCTATGGCACAACATTACAGTGATAGCA
NM_004932.3       TTTACATCGAAACTTCTTGACCGAGAAACACTGCTATGGCACAACATTACAGTGATAGCA
                  ************************************************************

HsCD00514350      ACAGAGATCAATAATCCAAAGCAAAGTAGTCGAGTACCTCTATATATTAAAGTTCTAGAT
NM_004932.3       ACAGAGATCAATAATCCAAAGCAAAGTAGTCGAGTACCTCTATATATTAAAGTTCTAGAT
                  ************************************************************

HsCD00514350      GTCAATGACAACGCCCCAGAATTTGCTGAGTTCTATGAAACTTTTGTCTGTGAAAAAGCA
NM_004932.3       GTCAATGACAACGCCCCAGAATTTGCTGAGTTCTATGAAACTTTTGTCTGTGAAAAAGCA
                  ************************************************************

HsCD00514350      AAGGCAGATCAGTTGATTCAGACCTTGCATGCTGTTGACAAGGATGACCCTTATAGTGGG
NM_004932.3       AAGGCAGATCAGTTGATTCAGACCCTGCATGCTGTTGACAAGGATGACCCTTATAGTGGA
                  ************************ **********************************.

HsCD00514350      CACCAATTTTCGTTTTCCTTGGCCCCTGAAGCAGCCAGTGGCTCAAACTTTACCATTCAA
NM_004932.3       CACCAATTTTCGTTTTCCTTGGCCCCTGAAGCAGCCAGTGGCTCAAACTTTACCATTCAA
                  ************************************************************

HsCD00514350      GACAACAAAGACAACACGGCGGGAATCTTAACTCGGAAAAATGGCTATAATAGACACGAG
NM_004932.3       GACAACAAAGACAACACGGCGGGAATCTTAACTCGGAAAAATGGCTATAATAGACACGAG
                  ************************************************************

HsCD00514350      ATGAGCACCTATCTCTTGCCTGTGGTCATTTCAGACAACGACTACCCAGTTCAAAGCAGC
NM_004932.3       ATGAGCACCTATCTCTTGCCTGTGGTCATTTCAGACAACGACTACCCAGTTCAAAGCAGC
                  ************************************************************

HsCD00514350      ACTGGGACAGTGACTGTCCGGGTCTGTGCATGTGACCACCACGGGAACATGCAATCCTGC
NM_004932.3       ACTGGGACAGTGACTGTCCGGGTCTGTGCATGTGACCACCACGGGAACATGCAATCCTGC
                  ************************************************************

HsCD00514350      CACGCGGAGGCGCTCATCCACCCCACGGGACTGAGCACGGGGGCTCTGGTTGCCATCCTT
NM_004932.3       CATGCGGAGGCGCTCATCCACCCCACGGGACTGAGCACGGGGGCTCTGGTTGCCATCCTT
                  ** *********************************************************

HsCD00514350      CTGTGCATCGTGATCCTACTAGGTAAACTGGTTCTCCCTGCCTCCTATCTCCCCATGGTG
NM_004932.3       CTGTGCATCGTGATCCTACTAGTGACAGTGGTGCTGTTTGCAGCTCTGAGGCGGCAGCGA
                  **********************  *.* **** **   ***. *  : .  *  .:*  .

HsCD00514350      AGGGGCTCACACTGTTACTGTGACACTCTAGATTTATCTGCCTCCCCCATTAAGGCATAC
NM_004932.3       AAAAAAGAGCCTTTGATCATTTCCAAAGAGGACATCAGAGATAACATTGTCAGTTACAAC
                  *..... ..*. *  ::*: * .**.: :.** :*.: :*. :.*.  .* *.  ..:**

HsCD00514350      AGCCTGATC---------------------------------------------------
NM_004932.3       GACGAAGGTGGTGGAGAGGAGGACACCCAGGCTTTTGATATCGGCACCCTGAGGAATCCT
                  ..* :..                                                     

HsCD00514350      ------------------------------------------------------------
NM_004932.3       GAAGCCATAGAGGACAACAAATTACGAAGGGACATTGTGCCCGAAGCCCTTTTCCTACCC
                                                                              

HsCD00514350      ------------------------------------------------------------
NM_004932.3       CGACGGACTCCAACAGCTCGCGACAACACCGATGTCAGAGATTTCATTAACCAAAGGTTA
                                                                              

HsCD00514350      ------------------------------------------------------------
NM_004932.3       AAGGAAAATGACACGGACCCCACTGCCCCGCCATACGACTCCTTGGCCACTTACGCCTAT
                                                                              

HsCD00514350      ------------------------------------------------------------
NM_004932.3       GAAGGCACTGGCTCCGTGGCGGATTCCCTGAGCTCGCTGGAGTCAGTGACCACGGATGCA
                                                                              

HsCD00514350      ------------------------------------------------------------
NM_004932.3       GATCAAGACTATGATTACCTTAGTGACTGGGGACCTCGATTCAAAAAGCTTGCAGATATG
                                                                              

HsCD00514350      ---------------------------------
NM_004932.3       TATGGAGGAGTGGACAGTGACAAAGACTCCTAA

Pathways

Panther :

Cadherin signaling pathway

Panther :

Wnt signaling pathway

Reactome :

Adherens junctions interactions

Reactome :

Cell junction organization

Reactome :

Cell-Cell communication

Reactome :

Cell-cell junction organization

WikiPathway :

Neural Crest Differentiation

Protein

SMART domain :

CA : Cadherin repeats.

HPRD :

04305

Clone

Cloning Information :

665949

Original Clone ID :

ccsbBroadEn_10724

Organism

Species Specific ID:

1004

Genome

Chromosome :

Map Location :

5p13.3

Ensembl :

ENSG00000113361

Reagents

Labome :

CDH6-antibody