PCDHAC2 (Homo sapiens) in pENTR223 (Gateway donor/master vector)

Explanation of Terms

Gene:
Gene Symbol:  PCDHAC2
Gene Name:  protocadherin alpha subfamily C, 2
Original Clone ID:
ccsbBroadEn_08627
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pENTR223
Format: 
FUSION
Source:
The ORFeome Collaboration
Description:
Original GenBank Accession: BC104776.1
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
HsCD00516369
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 2653nts
Open reading frame: 1 to 2653

ATGGAGCAGGCGGGCACCAGACCTGCGGCGACAGAGCATCCACGGCTCCGGCGGCCCATG
CCCTGGCTGCTGCTACTGCCTCTCCTGCTGCTGTTGCTGCTGCTGCTACCTGGCCCAGCG
GCCTCCCAGCTGCGATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAAC
GTGGCTCGCGCGCTGGGGCTTGAGCTGCGGCGCTTGGGGCCGGGTTGCTTGCGCATCAAC
CATCTGGGTGCGCCCAGTCCGCGCTACCTGGAGCTGGACCTGACGAGTGGAGCGCTCTTC
GTCAACGAGCGCATTGATCGGGAGGCGCTGTGTGAGCAGCGGCCTCGCTGCCTGCTCAGC
CTGGAAGTGCTGGCGCACAACCCCGTGGCGGTGAGCGCCGTTGAGGTGGAAATATTGGAC
ATCAACGACAACTCACCGCGTTTCCCGCGGCCCAACTACCAGCTTCAGGTAAGCGAATCG
GTGGCGCCTGGAGCGCGCTTTCACATAGAGAGTGCGCAGGACCCCGACGTGGGCGCCAAC
TCAGTACAGACCTACGAGCTCAGCCCCAGCGAGCACTTCGAGCTGGACCTTAAGCCCCTG
CAGGAGAACAGTAAAGTGCTTGAGCTGGTGCTGCGTAAGGGCCTAGACCGGGAGCAGGCA
GCCTTGCACCACCTGGTTCTCACAGCCGTGGATGGGGGCATTCCAGCCCGCTCGGGTACG
GCACAGATCTCTGTGCGTGTCCTGGACACTAACGACAACTCTCCTGCCTTTGACCAGTCC
ACTTATCGCGTCCAGCTACGGGAGGACTCACCCCCAGGCACATTGGTGGTGAAGCTGAAT
GCCTCAGACCCGGATGAGGGCTCCAATGGTGAGCTCAGGTACTCCTTGAGCAGCTACACG
TCGGACCGGGAGAGGCAGCTCTTCAGCATAGATGCCAGTACCGGGGAAGTGCGAGTAATT
GGGGGGCTGGATTATGAGGAAGCCTCCTCCTACCAGATCTATGTGCAGGCGACTGACCGG
GGTCCAGTGCCCATGGCAGGTCACTGCAAGGTGCTGGTGGACATCGTGGACGTGAATGAC
AATGCCCCAGAGGTGGTGCTCACGGACCTGTATAGCCCAGTGCCTGAGAATGCTACACCC
AACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTG
AGCCTGGGTCTGGAGGCCACACTGCCTTTCCGACTGAATGGCTTTGGAAACTCCTATACA
CTGGTGGTGAGCGGCCCACTGGACCGAGAGCGGGTGGCTGTCTACAACATCACGGTGACA
GCCACAGATGGGGGAATACCGCAGCTCACATCCCTGCGTACACTGAAGGTTGAGATCTCT
GACATCAATGACAATCCACCAAGCTTCCTGGAGGACTCCTATTCCATCTACATACAGGAG
AACAATTTGCCAGGTGTGTTGCTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAGGAG
AATGCAGAGGTGACCTACTCCCTTCTGGAGAGGGAGATTCAAGGGCTGCCAGTCACCTCC
TATGTCTCCATTAACAGTGCCAGTGGCAGCCTTTATGCTGTCAACTCCTTTGACTATGAG
AAGTTTCGGGAGTTCTTTGTGACTGTGGAGGCTCAGGACAAGGGGAGCCCACCACTGAGC
AGCACTGTGACTGCCAACGTATATGTGGTGGACATGAATGACCATGCCCCTCACATTCTG
TACCCTACCTCAACCAACTCGTCAGCAGCCTTCGAGATGGTGCCTCGAACTGCCCCTGCT
GGCTACCTGGTCACCAAAGTCATAGCTATGGACTCAGACTCTGGGCAAAATGCTTGGCTT
TTTTACCATCTAGCCCAGACTTCTGACCTGGACCTCTTTAAGGTAGAGCTGCACACAGGA
GAAATTAGGACTACCAGGAAGATGGGAGATGAGAGTGGTAGCACTTTCAACCTGACCGTG
GTGGTCCGAGATAATGGAGAGCCATCACTATCAGCCTCTGTGGCCATTACAGTAGCTGTG
GTGGATAGGGTTTCCAAAATCCTCCCTGACACTCAGAGGCATGTTAAGAGCCCTCGGACA
TACTCTGAAATTACCCTTTATCTAATAATAGCATTAAGCACAGTGTCTTTTATATTTCTT
TTGACAATCATCATTTTGAGCATCATCAAGTGCTACCGCTACACTGCGTATGGCACTGCA
TGCTGTGGAGGCTTCTGTGGAGTAAGGGAAAGGTCCCCTGCAGAACTGTACAAACAAGCC
AACAACAATATTGATGCCAGGATACCGCATGGCCTCAAAGTGCAGCCTCACTTCATTGAA
GTTCGAGGGAATGGCTCCCTCACCAAGACCTACTGCTACAAGGCCTGTCTGACAGCAGGC
TCAGGGAGTGACACTTTCATGTTTTACAATACAGGGGCCCAGACAGGACCAGGGCCTTCG
GGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAAAGTGGTCAGAATGCT
GGGAACCTGATTATTCTCAAAAATGAGGCTGTTTCTCAAAATGAGGTGAGACAGTGGTCA
GGGGGTCTTCTACAAACTCATGCATTTGTTACACATCCCCCAATATCCTGTGATTTGGCT
TTATTGAGTCAT

Protein sequence predicted based on nucleotide sequence

MEQAGTRPAATEHPRLRRPMPWLLLLPLLLLLLLLLPGPAASQLRYSVPEEQAPGALVGN
VARALGLELRRLGPGCLRINHLGAPSPRYLELDLTSGALFVNERIDREALCEQRPRCLLS
LEVLAHNPVAVSAVEVEILDINDNSPRFPRPNYQLQVSESVAPGARFHIESAQDPDVGAN
SVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGT
AQISVRVLDTNDNSPAFDQSTYRVQLREDSPPGTLVVKLNASDPDEGSNGELRYSLSSYT
SDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRGPVPMAGHCKVLVDIVDVND
NAPEVVLTDLYSPVPENATPNTIVAVLSVNDQDSGPNRKVSLGLEATLPFRLNGFGNSYT
LVVSGPLDRERVAVYNITVTATDGGIPQLTSLRTLKVEISDINDNPPSFLEDSYSIYIQE
NNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSINSASGSLYAVNSFDYE
KFREFFVTVEAQDKGSPPLSSTVTANVYVVDMNDHAPHILYPTSTNSSAAFEMVPRTAPA
GYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGSTFNLTV
VVRDNGEPSLSASVAITVAVVDRVSKILPDTQRHVKSPRTYSEITLYLIIALSTVSFIFL
LTIIILSIIKCYRYTAYGTACCGGFCGVRERSPAELYKQANNNIDARIPHGLKVQPHFIE
VRGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNA
GNLIILKNEAVSQNEVRQWSGGLLQTHAFVTHPPISCDLALLSH

Coding Sequence Details

Insert Sequence Verified?:
N
Verification Method:
Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  spectinomycin
Bacterial Selection Condition: 100 ug/mL spectinomycin
Growth Condition: Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments: None
Protein Expression Results:
None
Recommended expression in:
Not Applicable