FNDC1 (Homo sapiens) in pENTR223 (Gateway donor/master vector)

Explanation of Terms

Gene:
Gene Symbol:  FNDC1
Gene Name:  fibronectin type III domain containing 1
Original Clone ID:
ccsbBroadEn_12834
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pENTR223
Format: 
FUSION
Source:
The ORFeome Collaboration
Description:
Original GenBank Accession: BC146783.1
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Harvard Medical School
Dana-Farber Cancer Institute
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
David E Hill
David E Root
The ORFeome Collaboration
HsCD00516450
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 5320nts
Open reading frame: 1 to 5320

ATGGGCCTGAAAGTCACGTGGGACCCACCCAAAGATGCTACCAGTAGACCTGTGGAGCAT
TACAACATTGCCTATGGGAAGTCACTGAAAAGTCTTAAATACATCAAGGTGAATGCGGAG
ACATACTCCTTCCTTATTGAGGATGTGGAGCCGGGGGTAGTGTACTTTGTGCTGCTTACT
GCAGAAAACCACAGTGGAGTGAGCCGTCCTGTTTACAGAGCTGAAAGCCCACCTGGAGGT
GAATGGATCGAGATTGATGGTTTTCCCATTAAGGGTCCAGGACCATTTAATGAAACCGTC
ACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCGTGTCCGGTCCTCAGATGACAGG
CTGTCCGTTGCGTGGAAGGCACCACGCCTGTCTGGAGCCAAGAGTCCACGCAGATCACGG
GGTTTTCTCCTGGGCTACGGGGAGAGTGGCCGGAAGATGAATTATGTTCCACTGACAAGA
GATGAACGGACACACGAAATTAAAAAGCTAGCCTCGGAATCCGTGTATGTGGTCTCCCTG
CAGTCCATGAACTCTCAGGGCCGGAGCCAACCAGTCTACAGGGCTGCCCTAACAAAGCGA
AAGATTTCAGAAGAGGACGAATTGGATGTACCTGACGACATCAGCGTCCGGGTTATGTCA
TCTCAGTCTGTGCTTGTGTCCTGGGTGGATCCTGTTCTGGAAAAACAGAAGAAAGTTGTT
GCATCAAGACAGTACACCGTGCGCTATCGAGAGAAGGGGGAATTGGCCAGGTGGGATTAT
AAGCAGATCGCTAACAGGCGTGTGCTGATTGAGAACCTGATTCCAGACACTGTGTATGAA
TTTGCAGTCCGTATTTCACAGGGTGAAAGAGATGGCAAATGGAGTACGTCAGTCTTCCAA
AGAACACCAGAATCTGCCCCTACCACAGCTCCTGAAAACTTGAACGTCTGGCCAGTCAAT
GGCAAACCTACAGTTGTCGCTGCATCTTGGGATGCGCTACCAGAGACTGAGGGGAAAGTG
AAAGCCAGTAAGGCGGATGTTCAGCAGAACACGGAGGACAATGGGAAACCCGAAAAACCT
GAGCCTTCCTCACCTTCTCCCAGAGCTCCAGCTTCCTCCCAACACCCCTCTGTGCCTGCT
TCTCCCCAAGGGAGAAATGCCAAGGACCTTCTTCTTGACTTGAAGAACAAAATATTGGCT
AATGGTGGGGCGCCCCGAAAACCCCAGCTTCGCGCCAAGAAGGCAGAGGAGCTGGATCTT
CAGTCGACAGAAATCACTGGGGAGGAGGAGCTGGGTTCCCGGGAGGACTCGCCCATGTCA
CCCTCAGACACCCAAGACCAGAAACGGACCCTGAGGCCGCCAAGTAGACACGGCCACTCG
GTGGTTGCTCCCGGCAGGACTGCAGTGAGGGCCCGGATGCCAGCGCTGCCCCGAAGGGAA
GGCGTAGATAAGCCTGGCTTTTCCCTGGCCACGCAGCCCCGCCCAGGGGCGCCCCCCTCG
GCTTCGGCCTCTCCTGCCCACCACGCGTCCACCCAGGGCACCTCTCATCGTCCTTCCCTG
CCTGCCAGCTTGAATGACAACGACTTGGTGGACTCAGACGAAGATGAGCGCGCTGTGGGC
TCCCTCCACCCCAAGGGCGCCTTCGCCCAGCCCCGGCCAGCCCTGTCCCCCAGCCGCCAG
TCCCCGTCCAGCGTTCTCCGCGACAGAAGCTCTGTGCACCCCGGCGCAAAGCCAGCCTCG
CCGGCCCGGAGGACCCCCCATTCAGGGGCCGCAGAGGAAGATTCCAGTGCCTCAGCCCCA
CCCTCAAGACTTTCTCCACCCCATGGGGGATCATCTCGGCTGCTGCCCACCCAGCCACAC
CTGAGCTCTCCACTTTCCAAGGGCGGGAAGGATGGTGAGGACGCCCCAGCCACCAACTCC
AATGCGCCATCACGGTCCACCATGTCCTCCTCCGTCTCTTCTCATCTCTCGTCCAGGACG
CAGGTCTCTGAGGGAGCGGAGGCTTCTGATGGTGAAAGCCACGGTGACGGCGATAGGGAA
GACGGCGGAAGGCAGGCGGAGGCCACGGCCCAGACGCTGCGGGCCCGGCCTGCCTCTGGA
CACTTCCATTTGCTCAGACACAAACCCTTTGCTGCCAACGGGAGGTCTCCAAGCAGGTTC
AGCATTGGGCGGGGACCTCGGCTGCAGCCCTCCAGCTCCCCACAGTCGACTGTGCCCTCC
CGAGCCCACCCCAGGGTTCCCTCTCACTCTGATTCCCACCCTAAGCTTAGCTCAGGTATC
CATGGAGACGAGGAGGATGAGAAGCCGCTTCCTGCCACCGTTGTCAATGACCACGTGCCT
TCCTCCTCCAGGCAGCCCATCTCCCGGGGCTGGGAGGACTTAAGGAGAAGCCCGCAGAGA
GGGGCCAGCCTGCATCGGAAGGAACCCATCCCAGAGAACCCCAAATCCACAGGGGCAGAT
ACACATCCTCAGGGCAAGTACTCCTCCCTGGCCTCCAAGGCTCAGGATGTTCAACAGAGC
ACAGACGCGGACACGGAGGGTCATTCTCCCAAAGCACAGCCAGGGTCCACAGACCGCCAC
GCGTCCCCTGCTCGTCCTCCCGCAGCACGGTCACAGCAGCATCCCAGTGTTCCCAGAAGG
ATGACACCCGGCCGGGCCCCAGAACAGCAGCCCCCTCCTCCCGTCGCCACGTCCCAGCAC
CACCCGGGACCCCAGAGCAGAGACGCGGGTCGGTCACCTTCCCAGCCCAGGCTCTCACTG
ACCCAGGCCGGGCGGCCCCGCCCCACGTCGCAGGGCCGCTCCCACTCCTCCTCGGACCCT
TACACGGCGAGCTCCAGAGGGATGCTCCCCACGGCCCTCCAGAACCAGGACGAGGATGCC
CAGGGCAGCTACGACGACGACAGCACAGAAGTCGAGGCCCAGGATGTGCGGGCCCCCGCA
CACGCCGCGCGCGCCAAGGAGGCAGCTGCGTCCCTTCCCAAGCACCAGCAGGTGGAGTCT
CCCACAGGCGCAGGGGCAGGTGGTGACCACAGGTCCCAGCGCGGACATGCGGCCTCCCCC
GCCAGGCCCAGCCGACCCGGCGGCCCCCAGTCCCGCGCCCGGGTCCCCAGCAGGGCAGCG
CCGGGGAAGTCGGAGCCTCCTTCCAAGCGGCCCCTGTCCTCCAAGTCCCAGCAGTCGGTC
TCAGCCGAGGACGAGGAGGAGGAGGACGCGGGGTTTTTTAAAGGCGGGAAAGAAGACCTT
CTGTCTTCCTCTGTGCCAAAGTGGCCCTCTTCCTCCACTCCCAGGGGCGGCAAAGACGCC
GATGGGAGCCTCGCCAAGGAAGAGAGGGAGCCTGCCATCGCGCTTGCCCCTCGCGGAGGG
AGCCTGGCTCCTGTGAAGCGACCTCTCCCCCCACCTCCAGGCAGCTCCCCCAGGGCCTCC
CACGTCCCTTCCCGACCGCCGCCTCGCAGCGCTGCCACCGTGAGCCCCGTCGCGGGCACC
CACCCCTGGCCGCGGTACACCACGCGCGCCCCGCCTGGCCACTTCTCCACCACCCCGATG
CTGTCCTTGCGCCAGAGGATGATGCATGCCAGATTCCGTAACCCTCTCTCCCGACAGCCT
GCCAGACCCTCTTACAGACAAGGTTATAATGGCAGACCAAATGTAGAAGGGAAAGTCCTT
CCTGGTAGTAATGGAAAACCGAATGGACAGAGAATTATCAATGGCCCTCAAGGAACAAAG
TGGGTTGTGGACCTTGATCGTGGGTTAGTATTGAATGCAGAAGGAAGGTACCTCCAAGAT
TCACATGGAAATCCTCTTCGGATTAAACTAGGAGGAGATGGTCGAACCATTGTAGATCTG
GAAGGGACCCCCGTGGTGAGTCCTGACGGCCTCCCACTCTTTGGGCAGGGGCGACATGGC
ACACCTCTGGCCAATGCCCAAGATAAGCCAATTTTGAGTCTTGGAGGAAAGCCGCTGGTG
GGTTTGGAGGTCATCAAAAAAACCACCCATCCCCCTACCACTACCATGCAGCCCACCACT
ACTACGACGCCCCTGCCTACCACTACAACCCCGAGGCCCACCACTGCCACCACCCGCCGC
ACGACCACCAGGCGTCCAACAACCACAGTCCGAACCACTACGCGGACAACCACCACCACC
ACCCCCAAACCCACCACTCCCATCCCCACCTGTCCCCCTGGGACCTTGGAACGGCACGAC
GATGATGGCAACCTGATAATGAGCTCCAATGGGATCCCAGAGTGCTACGCTGAAGAAGAT
GAGTTCTCAGGCTTGGAGACTGACACTGCAGTACCTACGGAAGAGGCCTACGTTATATAT
GATGAAGATTATGAATTTGAGACGTCAAGGCCACCAACCACCACTGAGCCTTCGACCACT
GCTACCACACCGAGGGTGATCCCAGAGGAAGGCGCCATCAGTTCCTTTCCTGAAGAAGAA
TTTGATCTGGCTGGAAGGAAACGATTTGTTGCTCCTTACGTGACGTACCTAAATAAAGAC
CCATCAGCCCCGTGCTCTCTGACTGATGCACTGGATCACTTCCAAGTGGACAGCCTCGAT
GAAATCATCCCCAATGACCTGAAGAAGAGTGACCTGCCTCCCCAGCATGCTCCCCGCAAC
ATCACCGTGGTGGCCGTGGAAGGTTGCCACTCATTTGTCATTGTGGACTGGGACAAAGCT
ACCCCAGGAGATGTGGTCACAGGTTACTTGGTTTACAGTGCATCCTATGAAGACTTCATC
AGGAACAAGTGGTCCACTCAAGCTTCATCAGTAACTCACTTGCCCATTGAGAACCTAAAG
CCCAACACGAGGTATTATTTTAAAGTGCAAGCACAAAATCCTCATGGCTACGGACCTATC
AGCCCTTCGGTCTCATTTGTCACCGAATCAGATAATCCTCTGCTTGTTGTGAGGCCCCCA
GGCGGTGAGCCTATCTGGATCCCATTCGCTTTCAAACATGATCCCAGCTACACGGACTGC
CATGGACGGCAATATGTGAAGCGCACGTGGTATCGAAAGTTCGTGGGAGTTGTTCTTTGT
AATTCACTGAGGTATAAAATCTACCTCAGTGACAACCTGAAAGATACATTCTACAGCATT
GGAGACAGCTGGGGAAGAGGTGAAGACCATTGCCAATTTGTGGATTCACACCTTGATGGA
AGAACAGGGCCTCAGTCCTATGTAGAAGCCCTCCCTACTATTCAAGGCTACTATCGCCAG
TATCGTCAGGAGCCTGTCAGGTTTGGGAACATCGGCTTCGGAACCCCCTACTACTATGTG
GGCTGGTACGAGTGTGGGGTCTCCATCCCTGGAAAGTGG

Protein sequence predicted based on nucleotide sequence

MGLKVTWDPPKDATSRPVEHYNIAYGKSLKSLKYIKVNAETYSFLIEDVEPGVVYFVLLT
AENHSGVSRPVYRAESPPGGEWIEIDGFPIKGPGPFNETVTEKEVPNKPLRVRVRSSDDR
LSVAWKAPRLSGAKSPRRSRGFLLGYGESGRKMNYVPLTRDERTHEIKKLASESVYVVSL
QSMNSQGRSQPVYRAALTKRKISEEDELDVPDDISVRVMSSQSVLVSWVDPVLEKQKKVV
ASRQYTVRYREKGELARWDYKQIANRRVLIENLIPDTVYEFAVRISQGERDGKWSTSVFQ
RTPESAPTTAPENLNVWPVNGKPTVVAASWDALPETEGKVKASKADVQQNTEDNGKPEKP
EPSSPSPRAPASSQHPSVPASPQGRNAKDLLLDLKNKILANGGAPRKPQLRAKKAEELDL
QSTEITGEEELGSREDSPMSPSDTQDQKRTLRPPSRHGHSVVAPGRTAVRARMPALPRRE
GVDKPGFSLATQPRPGAPPSASASPAHHASTQGTSHRPSLPASLNDNDLVDSDEDERAVG
SLHPKGAFAQPRPALSPSRQSPSSVLRDRSSVHPGAKPASPARRTPHSGAAEEDSSASAP
PSRLSPPHGGSSRLLPTQPHLSSPLSKGGKDGEDAPATNSNAPSRSTMSSSVSSHLSSRT
QVSEGAEASDGESHGDGDREDGGRQAEATAQTLRARPASGHFHLLRHKPFAANGRSPSRF
SIGRGPRLQPSSSPQSTVPSRAHPRVPSHSDSHPKLSSGIHGDEEDEKPLPATVVNDHVP
SSSRQPISRGWEDLRRSPQRGASLHRKEPIPENPKSTGADTHPQGKYSSLASKAQDVQQS
TDADTEGHSPKAQPGSTDRHASPARPPAARSQQHPSVPRRMTPGRAPEQQPPPPVATSQH
HPGPQSRDAGRSPSQPRLSLTQAGRPRPTSQGRSHSSSDPYTASSRGMLPTALQNQDEDA
QGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGAGGDHRSQRGHAASP
ARPSRPGGPQSRARVPSRAAPGKSEPPSKRPLSSKSQQSVSAEDEEEEDAGFFKGGKEDL
LSSSVPKWPSSSTPRGGKDADGSLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRAS
HVPSRPPPRSAATVSPVAGTHPWPRYTTRAPPGHFSTTPMLSLRQRMMHARFRNPLSRQP
ARPSYRQGYNGRPNVEGKVLPGSNGKPNGQRIINGPQGTKWVVDLDRGLVLNAEGRYLQD
SHGNPLRIKLGGDGRTIVDLEGTPVVSPDGLPLFGQGRHGTPLANAQDKPILSLGGKPLV
GLEVIKKTTHPPTTTMQPTTTTTPLPTTTTPRPTTATTRRTTTRRPTTTVRTTTRTTTTT
TPKPTTPIPTCPPGTLERHDDDGNLIMSSNGIPECYAEEDEFSGLETDTAVPTEEAYVIY
DEDYEFETSRPPTTTEPSTTATTPRVIPEEGAISSFPEEEFDLAGRKRFVAPYVTYLNKD
PSAPCSLTDALDHFQVDSLDEIIPNDLKKSDLPPQHAPRNITVVAVEGCHSFVIVDWDKA
TPGDVVTGYLVYSASYEDFIRNKWSTQASSVTHLPIENLKPNTRYYFKVQAQNPHGYGPI
SPSVSFVTESDNPLLVVRPPGGEPIWIPFAFKHDPSYTDCHGRQYVKRTWYRKFVGVVLC
NSLRYKIYLSDNLKDTFYSIGDSWGRGEDHCQFVDSHLDGRTGPQSYVEALPTIQGYYRQ
YRQEPVRFGNIGFGTPYYYVGWYECGVSIPGKW

Coding Sequence Details

Insert Sequence Verified?:
N
Verification Method:
Verified by the ORFeome collaboration
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  spectinomycin
Bacterial Selection Condition: 100 ug/mL spectinomycin
Growth Condition: Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments: None
Protein Expression Results:
None
Recommended expression in:
Not Applicable