Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
10423a4BCt6p1
Keyword:
partial length cds 2-503 of 1259 aa
Species:
Methanosarcina mazei
Type:
cDNA
Vector Name:
pSGX3
Format: 
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
Linker not verified.
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
MmCD00519342
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1533nts
Open reading frame: 1 to 1533

GATGAAAAACTAAGGACTTCTGGAGTTCAGGTTATCGGAGATATTGCCTGGGGCACACAT
TTCTGCCAGTTCTACCGGACGCAGGAAGAACTGGTGAATGTAGTATGTCCTTATTTGAAA
GCCGGACTGGAAGGTAACGAACTTTGCATATGGGCTTTGCCGCGAGATTTTGAGACGAAA
AAAGAAGCAGAAGGACCTCTGAGAAGAACTATTCCCAAACTTGATATTTATCTGGAAAAA
GGACAGATGGAAATAATTTCTTACAAAGACCGGTATGCAGAAAAAGAGATTCCTGACTCA
AAAAAAGCCCTGGAAAACTTGATTAAAAAAGCAGATTATGCTTTGCTTAATGGCTATAGT
GGTCTGAGACTGGTTCAGGACACTTCATGGCTGAAAAATGACTGGAAGAACCTCACCGGT
TATGAAGAAGAACTGGACATTGCCATTGAAAACCGACGCATAACAGCTCTTTGTACTTAT
TCCTCCGGCAAATTTGACACCGATGAAACTATATACGCGGCTTTGAGCCATCGATTTGTT
CTGGTTAAAAAGGAAGGGAACTGGGAAAAAGTTGAAAACCCCAGGCTTAAAAAGGCGGAA
GAGAGAGTTATCCAGCCCTCAGAGGAAGTAGAAACCAAAACAGAGGAAGAAAACGAGAAC
CTGAAGAAATTACTTGAAGAAAGGACAGTAGAGCTTACAGAAGCTTACAAGTCACTGAAA
GTAAATGAAAAGCAATTTCTTCAAATCCGGAAAATGACTCATATCGGAAACTGGAAATGG
GATATTTTGACAGGGGAATTACACTGGTCTGATGAAGTTTACAGGATTTTCGGACGTGAC
CCTGAGAGGTTCAAAGCAACCTGTGATGCCTTTTTAGGCTCCGTGCACCCTGATGACCGG
GAATATTTGATTAATTCCATTAAGAAGGATTTTGATGAGCAGATCCGGAATATTGATTAT
CGGATAGTCCTGCCTGACGGAGAAGAACGCACAGTCCGTACACGGGTAGAAATCACTTTT
GATGAGGAAAACCAGCCTGTACGAGCCGAAGGAATAGTTCAGGATATTACGGAACTTAAA
AGAATAGAAAAAGCTCTGCAAGAACGGGAAGAGCAGTACAGGGCTTTCTTCGAGAACAGC
ATGGATGCCGTTCTTTTCGCATCACCAGACGGGACTATCCATGCAGCCAATAAAGCCGCC
TGTAAGACATTCGGAATGACCGAGAAAGAGATAATCAGGGCTGGCAGAAATGGAATAGTG
GATCAATCTGATCCAAGGCTCAAACCTTCCCTTGAAGAGAGAAACAGCACAGGCAGGTTT
AAAGGTGAAATCAATCACAAACGGAAAGATGGCACGATTTTTCCGGGGGAAGTGTCTACT
GCGCTCTTCAAAGACAAAAACGGTCTTATGAAAATAGTTATAATTATCAGGGACATTACC
GAACGCAAGAAGGCAGAAGAGGTTCTTCGGAAGAGTGAAGAACATTACCGAATGCTCTTT
ACAAATGAAGGGCATCATCACCATCACCACTGA

Protein sequence predicted based on nucleotide sequence

DEKLRTSGVQVIGDIAWGTHFCQFYRTQEELVNVVCPYLKAGLEGNELCIWALPRDFETK
KEAEGPLRRTIPKLDIYLEKGQMEIISYKDRYAEKEIPDSKKALENLIKKADYALLNGYS
GLRLVQDTSWLKNDWKNLTGYEEELDIAIENRRITALCTYSSGKFDTDETIYAALSHRFV
LVKKEGNWEKVENPRLKKAEERVIQPSEEVETKTEEENENLKKLLEERTVELTEAYKSLK
VNEKQFLQIRKMTHIGNWKWDILTGELHWSDEVYRIFGRDPERFKATCDAFLGSVHPDDR
EYLINSIKKDFDEQIRNIDYRIVLPDGEERTVRTRVEITFDEENQPVRAEGIVQDITELK
RIEKALQEREEQYRAFFENSMDAVLFASPDGTIHAANKAACKTFGMTEKEIIRAGRNGIV
DQSDPRLKPSLEERNSTGRFKGEINHKRKDGTIFPGEVSTALFKDKNGLMKIVIIIRDIT
ERKKAEEVLRKSEEHYRMLFTNEGHHHHHH*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
a803c,H268P;t788n;t819n
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-10423a
Recommended expression in:
Not Applicable