Gene:
Gene Symbol:
GALNT5
Gene Name:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
Original Clone ID:
None
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pGEn3-DEST
Format:
FUSION
Source:
Glyco-enzyme clone collection
Description:
None
Comments:
None
Mutation / Discrepancy:
Yes / No
Publications:
None
Authors:
University of Georgia
Center for Personalized Diagnostics
Arizona State University
Kelley Moremen
Center for Personalized Diagnostics
Arizona State University
Kelley Moremen
HsCD00522511
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AVAILABLE
No restriction
Special MTA: SPTA
Special MTA: SPTA
AGGAGGGAGCGGATAGGATTCAGAGTTCAGCCAGACCAAGGAAAAATTTTTTACAGCAGC
ATAAAAGAGATGAAACCTCCCCTAAGGGGACATGGGAAAGGGGCATGGGGCAAAGAGAAT
GTTAGAAAAACTGAGGAGAGTGTGCTCAAGGTTGAGGTGGACTTGGACCAAACCCAGAGG
GAAAGAAAAATGCAGAATGCCCTGGGAAGGGGCAAGGTTGTGCCGTTGTGGCATCCTGCA
CATCTGCAGACCCTCCCTGTGACTCCTAACAAGCAGAAGACAGACGGGAGAGGCACCAAA
CCTGAAGCCTCCTCTCACCAGGGGACACCAAAGCAAACGACAGCTCAGGGGGCTCCAAAG
ACCTCATTCATAGCAGCAAAAGGAACTCAGGTAGTCAAAATATCAGTACACATGGGACGT
GTCAGTTTAAAACAGGAGCCCCGGAAGAGTCATAGTCCCAGCAGTGACACATCAAAACTA
GCAGCTGAAAGGGACTTGAATGTGACCATCAGTCTTAGTACTGATAGACCAAAGCAGCGA
TCACAGGCAGTAGCAAACGAGAGGGCACACCCTGCCAGCACAGCAGTGCCGAAGTCTGGG
GAAGCCATGGCCTTAAACAAAACTAAGACTCAGAGCAAAGAAGTCAATGCAAATAAACAC
AAAGCCAATACGAGTCTTCCTTTTCCTAAGTTCACTGTCAATTCAAATCGCTTAAGGAAG
CAATCTATTAATGAGACACCTTTGGGAAGTTTGTCAAAGGATGATGGAGCTAGAGGGGCT
CATGGGAAGAAACTCAATTTCTCTGAAAGCCATCTTGTGATTATAACCAAAGAGGAAGAG
CAAAAGGCAGACCCCAAAGAGGTCTCTAATTCTAAAACCAAAACAATATTTCCTAAAGTA
TTGGGTAAAAGCCAAAGTAAACACATTTCCAGGAATAGAAGTGAGATGTCTTCCTCTTCA
CTTGCTCCACATAGAGTGCCACTGTCCCAAACTAACCATGCTTTAACTGGAGGGCTAGAG
CCAGCAAAAATCAACATAACTGCCAAAGCCCCCTCTACAGAATACAACCAGAGTCATATA
AAAGCCCTTTTACCTGAAGACAGTGGAACGCACCAGGTGTTAAGAATTGATGTGACACTT
TCTCCAAGGGACCCCAAAGCTCCAGGGCAGTTTGGGCGTCCTGTAGTTGTCCCCCATGGA
AAGGAGAAGGAGGCAGAAAGAAGATGGAAAGAAGGAAACTTCAATGTCTACCTTAGCGAT
TTGATCCCAGTGGATAGAGCCATTGAAGACACCAGACCTGCTGGATGTGCAGAGCAGCTA
GTTCACAATAACCTCCCAACCACCAGTGTCATCATGTGCTTTGTGGATGAAGTGTGGTCC
ACTCTCCTGAGATCTGTTCACAGTGTCATCAATCGCTCTCCTCCACACCTCATCAAGGAG
ATTCTGCTGGTAGATGACTTCAGCACCAAAGACTATCTAAAAGATAATTTGGATAAATAC
ATGTCCCAGTTTCCAAAAGTTCGGATTCTTCGCCTCAAAGAGAGACATGGCTTAATAAGG
GCCAGGCTGGCAGGAGCACAGAATGCAACAGGTGATGTGTTGACATTTTTAGATTCTCAT
GTGGAATGTAACGTTGGTTGGTTGGAACCTCTTCTGGAAAGAGTTTATTTAAGTAGAAAG
AAAGTGGCCTGTCCAGTAATCGAAGTCATCAATGATAAGGATATGAGTTACATGACAGTG
GATAACTTTCAAAGAGGCATCTTTGTGTGGCCCATGAACTTTGGTTGGAGAACAATTCCT
CCAGATGTCATTGCAAAAAACAGAATTAAAGAAACTGATACAATAAGGTGCCCTGTCATG
GCTGGTGGATTGTTTTCTATTGACAAAAGTTACTTTTTTGAACTTGGAACATACGACCCT
GGCCTTGATGTTTGGGGTGGGGAAAATATGGAGCTCTCATTCAAGGTGTGGATGTGTGGT
GGTGAAATTGAGATCATTCCCTGCTCCCGAGTGGGCCATATATTCAGAAATGACAATCCA
TATTCCTTCCCCAAAGACCGGATGAAGACAGTGGAGCGGAACTTGGTGCGGGTTGCCGAG
GTCTGGCTGGATGAGTATAAGGAGCTGTTCTATGGCCATGGAGACCACCTCATCGACCAA
GGGCTAGATGTTGGCAACCTCACCCAGCAAAGGGAGCTGCGAAAGAAACTGAAGTGCAAA
AGTTTCAAATGGTACTTGGAGAATGTCTTTCCTGACTTAAGGGCTCCCATTGTGAGAGCT
AGTGGTGTGCTTATTAATGTGGCTTTGGGTAAATGCATTTCCATTGAAAACACTACAGTC
ATTCTGGAAGACTGCGATGGGAGCAAAGAGCTTCAACAATTTAATTACACCTGGTTAAGA
CTTATTAAATGTGGAGAATGGTGTATAGCCCCCATCCCTGATAAAGGAGCCGTAAGGCTG
CACCCTTGTGATAACAGAAACAAAGGGCTAAAATGGCTGCATAAATCAACATCAGTCTTT
CATCCAGAACTGGTGAATCACATTGTTTTTGAAAACAATCAGCAATTATTATGCTTGGAA
GGAAATTTTTCTCAAAAGATCCTGAAAGTAGCTGCCTGTGACCCAGTGAAGCCATATCAA
AAGTGGAAATTTGAAAAATATTATGAAGCC
Protein sequence predicted based on nucleotide sequence
RRERIGFRVQPDQGKIFYSSIKEMKPPLRGHGKGAWGKENVRKTEESVLKVEVDLDQTQR ERKMQNALGRGKVVPLWHPAHLQTLPVTPNKQKTDGRGTKPEASSHQGTPKQTTAQGAPK TSFIAAKGTQVVKISVHMGRVSLKQEPRKSHSPSSDTSKLAAERDLNVTISLSTDRPKQR SQAVANERAHPASTAVPKSGEAMALNKTKTQSKEVNANKHKANTSLPFPKFTVNSNRLRK QSINETPLGSLSKDDGARGAHGKKLNFSESHLVIITKEEEQKADPKEVSNSKTKTIFPKV LGKSQSKHISRNRSEMSSSSLAPHRVPLSQTNHALTGGLEPAKINITAKAPSTEYNQSHI KALLPEDSGTHQVLRIDVTLSPRDPKAPGQFGRPVVVPHGKEKEAERRWKEGNFNVYLSD LIPVDRAIEDTRPAGCAEQLVHNNLPTTSVIMCFVDEVWSTLLRSVHSVINRSPPHLIKE ILLVDDFSTKDYLKDNLDKYMSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSH VECNVGWLEPLLERVYLSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIP PDVIAKNRIKETDTIRCPVMAGGLFSIDKSYFFELGTYDPGLDVWGGENMELSFKVWMCG GEIEIIPCSRVGHIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQ GLDVGNLTQQRELRKKLKCKSFKWYLENVFPDLRAPIVRASGVLINVALGKCISIENTTV ILEDCDGSKELQQFNYTWLRLIKCGEWCIAPIPDKGAVRLHPCDNRNKGLKWLHKSTSVF HPELVNHIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKFEKYYEA
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
del@1,150
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pGEn3-DEST
Synonyms:
''
Sequencing Primer:
Forward:
pGEn3-DEST-5'F
Reverse:
pGEn1-DEST R
Description:
Mammalian expression vector with a CMV promoter and N-terminal signal sequence, AviTag, superfolder GFP and Fc fragment; ampicillin resistance in bacteria; Gateway recombinational cloning
Comments:
None
Size (bp):
7632
Parent Vector:
Name:
pXKM
Description:
Properties:
Gateway, acceptor (destination), fluorescent marker, mammalian expression, recombinational cloning, with tag/fusion/marker
Author Name:
University of Georgia
Kelley Moremen
Kelley Moremen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 origin
1137
1804
death cassette
ccdB
ccdB death cassette (removed in vectors containing an insert)
5774
6079
gene fragment
Fc region
fragment crystallizable region (Fc region)
3832
4527
intron
artificial intron
artificial intron
2828
2960
poly-A signal
BGH pA
bovine growth hormone (BGH) polyadenylation signal
6808
7022
promoter
CMV
CMV promoter
2208
2790
recombination site
attR1
attR1 recombinational cloning site
4540
4556
recombination site
attR2
attR2 recombinational cloning site
6227
6242
recombination site
5'ITR
inverted terminal repeat sequence
1998
2127
recombination site
3'-ITR
inverted terminal repeat sequence
7110
7239
selectable marker
AmpR
Ampicillin resistance
129
1108
selectable marker
CmR
Chloramphenicol resistance (removed in vectors containing an insert)
4773
5429
signal sequence
TCM
TCM signal sequence
2977
3051
tag
His
N-terminal 10xHis tag
3055
3078
tag
AviTag
N-terminal AviTag
3079
3129
tag
GFP
N-terminal superfolder GFP
3130
3825
trxn regulatory element
WPRE
woodchuck hepatitis post-transcriptional regulatory element
6260
6801
