Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
12014b4BCt5p1
Keyword:
full-length cds
Species:
Phocaeicola vulgatus ATCC 8482
Type:
cDNA
Vector Name:
pSGX3
Format:
CLOSED
Source:
New York SGX Research Center for Structural Genomics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
New York SGX Research Center for Structural Genomics
New York SGX Research Center for Structural Genomics
BvCD00531574
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AVAILABLE
No restriction
Special MTA: PSI
Special MTA: PSI
Insert sequence: 2928nts
Open reading frame: 1 to 2928
AACGGAGATTATGAATCTTCTCCTTATTACATGAGTCTGAACGGTAGTTGGAAATTCCAT
TGGGTAAAGAATCCCGATAACCGTCCGAAGGATTTTTATAAACCGGAGTTTTATACAGGA
GGATGGGCGGATATTCAGGTTCCTGGCAATTGGGAACGTCAAGGATATGGAACAGCTATT
TATGTAAACGAAACCTATGAGTTCGATGACAAACTGTTCCATTTTAAAAAGAATCCGCCT
TTAGTTCCATATAAAGAGAATGAAGTCGGTTCCTACAGACGTACCTTTACAATTCCTGCC
GATTGGGAAGACCGCCGTGTGGTTATCTGTTGTGAAGGAGTGATTTCTTTTTACTATATT
TGGGTGAACGGACATCTGTTGGGCTATAATCAAGGTTCAAAGACACCGGCCGAATGGGAT
ATCACTGATAAATTGAAGAAAGGTGAGAATACGGTGGCATTGGAGGTTTACCGTTGGAGT
GCCGGTTCGTATTTGGAGTGCCAGGATATGTGGCGGTTGAGTGGTATTGAACGTGATGTG
TATCTTTACAGCACTCCTAAACAGTATATAGCCGATTACAAAGTAACCTCTTCTTTAGAC
AAACAACAATATAAAGAAGGTATTTTCGGTTTGGAAGCTACCATTGAAGGACCTTCTACT
TCCATGACTACCTTTGCTTACCGACTGGAAGATAAAACCGGTAAGGCGGTTCTGCAAGGT
GAATATCCTATCAAATCGAAGGGATTGAGCCATTTCTTGAAGTTGGATGAACAAAGTTTG
CCGGATGTGGAAGTCTGGAGTGCTGAGCATCCGAATCTTTATACGCTGATCCTGGAATTG
AAAGATGTAACAGGTAAAGTAACGGAACTTACCGGATGTGAAGTAGGTTTCCGCACTTCG
GAAATTAAGGACGGACGTTTTTGCATCAATGGTGTGCCGGTCTTGGTAAAGGGAACGAAC
CGTCATGAACATTCTCAATTAGGACGGACTGTAAGCAAGGAACTGATGGAAAAAGATATC
AAATTGATGAAACAGCATAATATCAATACGGTCCGCAATTCGCACTATCCTACCCATCCT
TATTGGTATCAGCTTTGTGATCGTTATGGACTTTATATGATAGATGAAGCTAATATTGAA
TCACATGGCATGGGGTATGGACCTGCTTCATTGGCCAAAGATTCCACTTGGTTGCCTGCC
CACATGGATCGTACCCAACGTATGTATGAGCGTTCCAAGAATCATCCGGCTATCGTCATC
TGGTCATTGGGGAATGAAGCCGGAAACGGTATTAACTTCGAACGTACATATGACTGGATG
AAGTCAGTGGAGAAAAGTCGTCCTGTACAATATGAACGGGCCGAACAGAATTATAATACC
GATATCTATTGCCGTATGTATCGCAGCGTAGAAGAACTCATGGCCTATGCCCGCCAGACA
GAACCTAAAGTCTATCGTCCTTTCATCATGACAGAGTATCTGCATACTATGGGTAATAGT
GGCGGAGGATTAAAGGAATATATGCATGTATTCGAAACCGAACCGATTGTTCAGGGAGGT
TGTATCTGGGATTGGGTGGATCAATCTTTCCGCGAGATAGATAAGGATGGTAAATGGTAT
TGGAGTTATGGTGGGGATTATGGTCCGAAGGATGTGCCCAGCTTTGGCAATTTCTGTTGT
AACGGGTTGGTCAATGCAGCCCGCGAACCGCATCCGCATCTCATTGAAGTGAAGAAGGAG
TATCAATATATCAAATCGGCACTGACCGATCCTAAGAAGCTGACAGTGGAAGTCAAGAAC
TGGTATGACTTTACCAATTTGAATGCCTATACGTTGCACTGGCAGGTCATGGGGGATGAT
GGGAAAGTGATAGCAGAAGGAACTCGAAAAGCAGACTGTGCCCCTCATGAGACTGTAACA
TTCTCTTTGGGTGCTGTAAAGTTGCCTTCTACGATTCGTGAGGCTTATTTGAATCTGTCT
TGGACGCCTGATAAGGCAACTCCCTTTATTGGAACTCATGACGAAGTGGCCTATGACCAG
TTTGTGCTGTCTGCCAACAAAGGGTATCGTGCGCCGGAAATCAAATTGGCTGATAAGGTG
AAGATAGATATTGATCCTGCAACCGGCGCTTTACGCTCTTATATATATAAAGGTAAAGAG
ATGCTTTCATCTCCTGTAGTTCTCAGCCTTTATCGTCCTGTTACGGACAATGACAGCAGG
GAAAAAACAGGAGGAGCCAAAGTTTGGAGGAAAGAAGGTTTGGATAATATGATTCAAAAA
GCTACTTTTGTCAAAGCATCTGAAACAGGTGGTAAATCGGAAGTAGAATTATGGAATGCT
AAAGGCGTAAAGTTGGGAATGGCTACCTTTGTATATACTTTGCAGAGCAATGGTGCATTA
AAAGTAAAGACAACTTTCCTGCCGGATACTTCTGCTGTTACTTCATTGGCTAGAGTGGGC
CTGGCATTTGAAATGCCGTATGCCTATAACAAGGTTTCTTATTTGGGACGTGGTGAACAT
GAAACTTATATAGACCGTAATCAGTCTGGATGTATTGGAATTTACCATACAGATGCAGAA
CGTATGTTCCATTATTATGTGAAGCCCCAGGCTACAGGAAACCGTACGGATGTGCGTTGG
ATGGAATTGGCGGATGAGGCAAGAGAAGGTTTGTCTTTCCGTTCGGATAAAGTGTTTCAG
TTCAGTGTTATTCCATTTACGGATTCTAATGTAGATCAAGCTACTCATATTAATAAACTT
GAGAGAACAGGGATTATAAATGTTCACTTAGATGCGGAACAGTCGGGGGTAGGTACTGCG
ACTTGTGGTCCGGGGGTATTGCCGCCATATCGTGTTCCGGTGGAGAAGCATACGTTTGAG
TTTATGATTCGTCCATTAAAAGAAGGGCATCATCACCATCACCACTGA
Protein sequence predicted based on nucleotide sequence
NGDYESSPYYMSLNGSWKFHWVKNPDNRPKDFYKPEFYTGGWADIQVPGNWERQGYGTAI YVNETYEFDDKLFHFKKNPPLVPYKENEVGSYRRTFTIPADWEDRRVVICCEGVISFYYI WVNGHLLGYNQGSKTPAEWDITDKLKKGENTVALEVYRWSAGSYLECQDMWRLSGIERDV YLYSTPKQYIADYKVTSSLDKQQYKEGIFGLEATIEGPSTSMTTFAYRLEDKTGKAVLQG EYPIKSKGLSHFLKLDEQSLPDVEVWSAEHPNLYTLILELKDVTGKVTELTGCEVGFRTS EIKDGRFCINGVPVLVKGTNRHEHSQLGRTVSKELMEKDIKLMKQHNINTVRNSHYPTHP YWYQLCDRYGLYMIDEANIESHGMGYGPASLAKDSTWLPAHMDRTQRMYERSKNHPAIVI WSLGNEAGNGINFERTYDWMKSVEKSRPVQYERAEQNYNTDIYCRMYRSVEELMAYARQT EPKVYRPFIMTEYLHTMGNSGGGLKEYMHVFETEPIVQGGCIWDWVDQSFREIDKDGKWY WSYGGDYGPKDVPSFGNFCCNGLVNAAREPHPHLIEVKKEYQYIKSALTDPKKLTVEVKN WYDFTNLNAYTLHWQVMGDDGKVIAEGTRKADCAPHETVTFSLGAVKLPSTIREAYLNLS WTPDKATPFIGTHDEVAYDQFVLSANKGYRAPEIKLADKVKIDIDPATGALRSYIYKGKE MLSSPVVLSLYRPVTDNDSREKTGGAKVWRKEGLDNMIQKATFVKASETGGKSEVELWNA KGVKLGMATFVYTLQSNGALKVKTTFLPDTSAVTSLARVGLAFEMPYAYNKVSYLGRGEH ETYIDRNQSGCIGIYHTDAERMFHYYVKPQATGNRTDVRWMELADEAREGLSFRSDKVFQ FSVIPFTDSNVDQATHINKLERTGIINVHLDAEQSGVGTATCGPGVLPPYRVPVEKHTFE FMIRPLKEGHHHHHH*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Protein_Confirmed
ProteinPurified: Protein_Purified
SolubleProtein: Protein_Soluble
Find experimental protocols in NYSGXRC-12014b
Recommended expression in:
Not Applicable
Vector Name:
pSGX3
Synonyms:
pSGX-3, pSGX3_BC
Sequencing Primer:
Forward:
T7
Reverse:
T7 terminator
Description:
Bacterial (E. coli) expression vector with T7 promoter, adds C-terminal 6xHis tag; kanamycin resistance; TOPO cloning.
Comments:
Modified from pET26b from Novagen
Size (bp):
5339
Parent Vector:
None
Properties:
TOPO Cloning, bacterial expression, in vitro transcription, with tag/fusion/marker
Author Name:
New York SGX Research Center for Structural Genomics
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
ATG start
start
initiation start (Met, Ser, Leu)
5072
5079
TOPO recognition site
TOPO
TOPO cloning site
5076
5085
bacterial origin
ori
pBR322-type bacterial origin of replication
1421
2103
gene fragment
ROP
ROP
2527
2703
promoter
T7
T7 promoter
4983
5003
repressor protein gene
LacI
LacI CDS
3515
4531
selectable marker
KanR
kanamycin resistance gene
563
1375
tag
His
6xHis tag
5086
5103
trxn regulatory element
lac operator
lac operator
5003
5025
trxn termination sequence
T7 term
T7 terminator
5231
5307
