Gene:
Gene Symbol:
IL2005
Gene Name:
Na+/proline symporter
Original Clone ID:
GE.528.1.29_GO.13369
Keyword:
None
Species:
Idiomarina loihiensis L2TR
Type:
cDNA
Vector Name:
pNYCOMPS1
Format:
FUSION
Source:
New York Consortium on Membrane Protein Structure
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
PSI
New York Consortium on Membrane Protein Structure
New York Consortium on Membrane Protein Structure
IlCD00534148
Price:
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AVAILABLE
No restriction
Special MTA: PSI
Special MTA: PSI
Insert sequence: 3471nts
Open reading frame: 36 to 3506
GGGGCGAATTCCCTCAGACTTAGAAGAGATATACTATGACCTGGTTACTGATATTTGCCT
CGCTGGCTTATGTGATTTTCCTCTTCGCAGTTGCCACCTGGGGCGACCGTTTAGGCTCGT
GGGCGAATAAAATCAGTCACAAGCCAGTTGTCTACTCTATGTCGCTGGCCATCTACTGCA
CGTCCTGGACGTATTACGGCGCTGTGGGTAATGCAGCAGTTGACGGTTGGGCGTTCTTTC
CTATTTTGCTCGGGCCAATTTTGCTGTTCTTGTTTGGTATCCGAATTCTGGAAAAGCTGG
TTTCGGTTAGTAAACAACAAAATATTACTTCAATAGCCGACTTTATTTCTTCCCGCTTTG
GTAAACGCCGCCGGCTTGCCGTGGCTGTTACCGCCATTGCTGCCGTTGCTATTATTCCTT
ACATTGCGCTTCAGTTAAAAGCTGTGGGCATTAGCTTTGCGGTTCTGACTGAAAGCTCTG
GAGTGATGGCACAGTTTTCGATAAAAGAACTGGGTGCTGCTGCGCTAATGGCAATTTTTG
CTATGTTGTTTGGTACCCGCCACGTCGAAGTCACTGAATATCGCAGTGGCATGATACTGG
CTATTGCTGTTGAGTCGATGATCAAACTGGTTGCATTGCTGGCAGCTGGTGTTTTTGCCT
GGTTCCTGATTCAGGGAGACGCGCAATCGGACTTATTCAGTTCATTCAGTGACGCAACGA
AACCTCAGTGGTCATTTGCAGCCTTTGGCGAGTTTGAGTTCATTGTACAAACCCTGATGG
CGGCCGGGGCAATTTTGTGTTTACCCAGACAGTTTCATGTGGCGGTAGTGGACAATGTTG
ATGTCCGGCATTTACGCACGGCTCGTTGGGGCTTTCCTCTGTATCTGGCGCTGACCGCTG
CCGCAATTGTCCCCATTGCTATTGCAGGAACTTTCTATTTGTCAGCAACCACCGACGGTT
CAACGTTTGCGCTGCAACTGCCGTTACTCAAAGACCAGCTTTGGTTATCACTGGTTATTT
TTATTGGTGGTATATCCGCAGCAACAGCCATGGTGATTATCGCGTCCGTAACCTTAAGCA
CCATGATAACTAACGACGTTATCATGCCCATTTTGCTGCAGCGCGAGTCGCGCTTGCCGC
TAAAACATCGGCGTCGTGAATACGACCGGGCCTTACTATTAATTCGGCGTGTGGCTATTG
CCGTTACTATGGTGCTGTCGTTCTTGTGTTATTACTTCTGGGCAGCCCGGACTAACCTGG
TCAGTATTGGTTTGTTGGCGTTCTCGTTGGTGTTGCAGTTGCTGCCGGCGTTGCTGGCCG
CTCTGTATTGGCGTAAAGGCCACGCGCGGGGTGTTTACGCCGGGTTGGCTGCAGGTTCAG
TCGGCTGGGTTTTAGCGGTACTAATACCACTTTACACCGACTTGCAACTGACCGATGTGG
AAATAATAACCCGCGGTACTGTGGTTTCTTTAGCCTTAAATTGCTTCGGGTTCATTGTAT
TTTCATTGTTGGCAAAACCACGTCTGGTTGATCGTATTCAGGCAACGGCTTTTGTTAAAC
CCCGAGCCGCTTTACCCGATTTGCATTTCAACAAAAACGACAGTGCTACCAATGCCGATA
TGTTGTTGCTGTTAAGGACCTTTTTAGGGGCGGAACGGGCTCAGCAGTTAATGCAGTATT
ATCAGCGTCCGGAAAACACTGAGCTTCCGCTGGAAGGTGTGGCTGAAAAAACCTTTATCA
GTTTTGTGGAAAGAGCGATAGCTGGTGTACTTGGCTCTGCCACGGCGCGCTCTCTTGTCG
ATGCTGCACTGCGCGATAAGCAGCTAAATTTAGAAGAAGTTGTTCACTTCTTTGACGATA
CAACGCAAGCTCTGCAAACTCAGCAATCTATTTTGTTTAGCTCACTGGAGAACCTGGCTC
AGGGCATTAGTGTTGTTGACGCGGAGCTGAGGCTGGTGGCCTGGAATAAACGCTATATGG
ATTTATTCCAGTACCCTGAGGGCATGGTGAAACCCGGACAGCCCATAGCGACCCTTATTC
GTTATAACGCAGAGCGCGGAGAATGTGGTCCCGGTGACGTTGACGGGTTGGTGAATAAGC
GTTTGCGCTATATGCAGCTGGGATCGGCACACCGGTTTATTCGCCGGCGCGCCGATGGCC
GGGTTATAGAAATGGTAGGTAACCCTTTGCCGACCGGAGGCTTCGTTACCAGCTTTACCG
ACATTACTTCGCACGTTGAAACCCAGCAGGCACTGGAAGATGCCAATATTGATCTGGAAC
AGCGGGTTGACGTTCGGACCCAGGAAATACGCGAGATAAACCAGGAGCTGACAGCGGAAA
TAGACAGGCGCCGGCAAGTTGAGGACGAGCTGAAAAAAGCCAAGGCTGAAGCGGAAGCGA
CTAATGCTTCTAAAACACGTTTTCTGGCGTTGGCCAGTCATGATATTTTGCAGCCTCTTA
ATGCGGCGCGGTTGTACCTTTCGGCTATTCAGGAGAAAGAACTTTCGGAGCGGAATTTGT
CTCTGGTTGGCAAGCTGGACACCGCGCTTGGTTCAACAGAGCATTTACTCTCTACTTTAT
TGTCGATAGCAAAAATGGATCAGGGGGCTTTAAAACCGCAGTTCCGGCATGTGCAACTTA
GCTCATTATTGGAGCCTTTGGTTGAAGAATATGCAGTGCTGGCAGAGCAACGAAAGCTGG
ATTTTCGTGCGTTCTATAAAGACCGGCCGGTGTATACCGACCCAACGTATTTGCGCCGAA
TTGTGCAGAACTTTTTGTCTAATGCCATAAAATACACCCAAAGGGGCAGCGTGCTGTTGG
GCGTGCGCAAACGCGGAGATGAGCTTCAGATAGCCGTGTGGGATACCGGGCCGGGCATTG
CAGCGCAGCAGCAAAATAAGGTATTTGATGCATTTTATCGAGTGCAGAACCAAACCGTAG
ACGGTGTCGGCCTTGGATTAAGTGTCGCGCAACGTATGGGTGAGCAGTTAAACTGTGACG
TACAGGTTGAGTCGGTTGAAGGTAAAGGCTCGTGTTTTTCGGTACGAGTGCCGTTAGGCA
ATGCTGCTCAGGTTGTCAGCCGACCGAAAAAACAACTGGAAGATGCTTTATCTGATCCTT
TACAGCTTATTGTGGTCGATGACGACAATGAAAATTTAAGTGCGTTGAGTGCGCTGCTGA
ATAAGTGGGGGTGCGAAGCCCTGACATTTAATCGTTATAGCAAAGCTTTAGCCTATGCTA
AGGCTCACAGCCAGAACAAAGCGCCGCACGGACTGTTATTAGATTACCAGTTAGGTGACG
GTGACGGCTTGCAGTTGGCGCAGGAACTACGTGATATTTGGCAGCAACAGATACCGGCTG
CTTTGGTGACAGCGATGCGTGACGATGCCGTGAAGCAGGCGGCCCGCAAAAGCGGGCTGC
AGTTTTTACCTAAACCCGCTAAACCTGCCGCATTAAAAGCATTTTTAAAATACATTAGTA
CCCGAAAGGCGGGAGGAGCCAGAAGTGCCGAAAACCTCTATTTTCAGGGACATTATCACC
ATCA
Protein sequence predicted based on nucleotide sequence
MTWLLIFASLAYVIFLFAVATWGDRLGSWANKISHKPVVYSMSLAIYCTSWTYYGAVGNA AVDGWAFFPILLGPILLFLFGIRILEKLVSVSKQQNITSIADFISSRFGKRRRLAVAVTA IAAVAIIPYIALQLKAVGISFAVLTESSGVMAQFSIKELGAAALMAIFAMLFGTRHVEVT EYRSGMILAIAVESMIKLVALLAAGVFAWFLIQGDAQSDLFSSFSDATKPQWSFAAFGEF EFIVQTLMAAGAILCLPRQFHVAVVDNVDVRHLRTARWGFPLYLALTAAAIVPIAIAGTF YLSATTDGSTFALQLPLLKDQLWLSLVIFIGGISAATAMVIIASVTLSTMITNDVIMPIL LQRESRLPLKHRRREYDRALLLIRRVAIAVTMVLSFLCYYFWAARTNLVSIGLLAFSLVL QLLPALLAALYWRKGHARGVYAGLAAGSVGWVLAVLIPLYTDLQLTDVEIITRGTVVSLA LNCFGFIVFSLLAKPRLVDRIQATAFVKPRAALPDLHFNKNDSATNADMLLLLRTFLGAE RAQQLMQYYQRPENTELPLEGVAEKTFISFVERAIAGVLGSATARSLVDAALRDKQLNLE EVVHFFDDTTQALQTQQSILFSSLENLAQGISVVDAELRLVAWNKRYMDLFQYPEGMVKP GQPIATLIRYNAERGECGPGDVDGLVNKRLRYMQLGSAHRFIRRRADGRVIEMVGNPLPT GGFVTSFTDITSHVETQQALEDANIDLEQRVDVRTQEIREINQELTAEIDRRRQVEDELK KAKAEAEATNASKTRFLALASHDILQPLNAARLYLSAIQEKELSERNLSLVGKLDTALGS TEHLLSTLLSIAKMDQGALKPQFRHVQLSSLLEPLVEEYAVLAEQRKLDFRAFYKDRPVY TDPTYLRRIVQNFLSNAIKYTQRGSVLLGVRKRGDELQIAVWDTGPGIAAQQQNKVFDAF YRVQNQTVDGVGLGLSVAQRMGEQLNCDVQVESVEGKGSCFSVRVPLGNAAQVVSRPKKQ LEDALSDPLQLIVVDDDNENLSALSALLNKWGCEALTFNRYSKALAYAKAHSQNKAPHGL LLDYQLGDGDGLQLAQELRDIWQQQIPAALVTAMRDDAVKQAARKSGLQFLPKPAKPAAL KAFLKYISTRKAGGARS
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
SolubleProtein: Not_Applicable
ProteinExpressed: Tested_Not_Found
ProteinPurified: Tested_Not_Purified
Find experimental protocols in GO.13369
Recommended expression in:
Not Applicable
Vector Name:
pNYCOMPS1
Synonyms:
pNYCOMPS-1
Sequencing Primer:
Forward:
T7
Reverse:
T7 terminator
Description:
Bacterial expression vector with T7 promoter, adds C-terminal EGFP and 10xHis tag; kanamycin resistance; restriction enzyme cloning (including rare-cutter cloning into MCS).
Comments:
For the expression of membrane proteins in E.Coli, producing a fusion protein with a native N-terminus, and a C-terminal fusion of EGFP and a deca histadine tag. Requires C-term IN topology of MP for EGFP to be flourescent.
Size (bp):
6040
Parent Vector:
None
Properties:
bacterial expression, in vitro transcription, multiple cloning site, with tag/fusion/marker
Author Name:
New York Consortium on Membrane Protein Structure
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ori
ColE1-type bacterial origin of replication
1421
2103
promoter
T7
T7 promoter
4984
5003
repressor binding site
lac operator
lac operator
5003
5025
selectable marker
KanR
kanamycin resistance gene
563
1375
ssDNA origin
f1 ori
f1 origin
457
417
tag
His
C-terminal 10xHis tag
5845
5874
tag
EGFP
C-terminal EGFP tag
5131
5841
trxn regulatory element
LacI
LacI
3515
4594
trxn termination sequence
T7 term
T7 terminator
5969
6015
