Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
VpR98-21.1
Keyword:
None
Species:
Vibrio parahaemolyticus
Type:
cDNA
Vector Name:
pET21_NESG
Format: 
FUSION
Source:
Northeast Structural Genomics Consortium
Description:
None
Comments:
None
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
Rutgers University
PSI
Northeast Structural Genomics Consortium
VpCD00540810
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AVAILABLE
No restriction
Special MTA: PSI/NESG
Insert sequence: 870nts
Open reading frame: 30 to 899

TTTTGTTTACTTTAGAAGGAGATATACATATGAAACGTTTATTTTCTATTGTTGCTCTAT
TAATGTTTACCGTTGCTGTCACTCCTATCGCAGAAGCGAAGAAGTTTGGTGGCGGTAAGT
CTTTTGGTAAGAGCTACAAAACAGCACCTGCACCTAAACAGCAGCAACAAAACACCAATA
CGATCGGTAAAGAGCAAACGACCAAATCTTCTAGCAAGAAAGGTTTGATGGGCGGTCTAT
TAGGTGGCCTTCTAGCTGGTGGTCTACTTGCTGCGTTCTTCGGTGGTGCTTTTGAAGGTA
TCCAGTTTATGGATATCCTAATCATTGGTTTAATTGCCTTTATTATCTTTAAGCTTATGC
GCGGAATGTTAGGTGCGAAGCAGGGCAGTATGAACCAGCAACGTCAACAACCGGCATTTG
GTGGTAACGCGTCAAAGTTTGAACAACCAAACATGCAGAACTTTGAACAACAACCAAATA
CAAACGCAGGCGGTTTCACCGGTTTTGGTGCTCAAACAGATGTTCCGCACAATTACCCAC
CGGGTTTCGATCAAGCTGCGTTTATTAACGGTTCTCGTGAGCACTACCGCATTTTGCAAG
GTGCGTGGAACCACAACCAACTAGACACTATTGAAGAATATGTTTCTCCAAGTCTATTTG
AAGATCTGAAAGCTGAGCGCGCGAAGTTAGAAGGTGAGCAGCACACTGATGTGATGTATG
TTGATGCAGAGATCGTTCGTGCTGAATACGATGCGAACAAAGCACAATTAAGTTTGCAAT
TTAGTGGCCGTTACCGTGATGCTGCAGAAGGTGTCGAGGAAGATATTGAAGATATCTGGC
ACCTAGAGCGCGACCTAACAGTACCGAATGCACCTTGGTTGATTGTTGGTATTCAAGGTC
TCGAGCACCACCACCACCACCACTGAGATCCGGCTGCT

Protein sequence predicted based on nucleotide sequence

MKRLFSIVALLMFTVAVTPIAEAKKFGGGKSFGKSYKTAPAPKQQQQNTNTIGKEQTTKS
SSKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIIGLIAFIIFKLMRGMLGAKQGS
MNQQRQQPAFGGNASKFEQPNMQNFEQQPNTNAGGFTGFGAQTDVPHNYPPGFDQAAFIN
GSREHYRILQGAWNHNQLDTIEEYVSPSLFEDLKAERAKLEGEQHTDVMYVDAEIVRAEY
DANKAQLSLQFSGRYRDAAEGVEEDIEDIWHLERDLTVPNAPWLIVGIQG

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
g177a,K59K;a216t,G72G;

g237a,L79L;a495t,V165V;

a498g,P166P;c658t,L220L;

c693t,V231V;t729c,N243N
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  ampicillin
Bacterial Selection Condition: 100 ug/mL ampicillin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
ProteinPurified: Not_Tested
ProteinExpressed: Protein_Confirmed
SolubleProtein: Protein_Soluble
Find experimental protocols in VpR98
Recommended expression in:
Not Applicable