Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
None
Keyword:
Antibiotic: Amp; Order: 33; Position(AA): 1--3267; position(AA): 1-891; strain: wa strain; Full Length?: Yes
Species:
Human rotavirus A,wa strain
Type:
cDNA
Vector Name:
pANT7_cGST
Format:
FUSION
Source:
Center for Personalized Diagnostics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Center for Personalized Diagnostics
Xiaofang Bian
Xiaofang Bian
RwCD00594908
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3264nts
Open reading frame: 1 to 3264
ATGGGGAAGTACAATCTAATCTTGTCAGAATATTTATCATTTGTTTACAATTCACAATCT
GCAGTTCAAATACCAATTTACTATTCTTCTAATTCAGAATTAGAAAAGAGATGTATCGAA
TTTCATGCTAAATGTGTTGACAGTTCTAAGAAAGGTCTGTCATTAAAACCTTTATTCGAA
GAATATAAAGATGTAATAGATAATGCAACTTTACTATCTATATTATCATATTCTTATGAC
AAATACAACGCTGTAGAACGAAAGCTAGTCAATTATGCTAAAGGTAAACCATTAGAGGCT
GATTTAACGGCAAACGAGATTGATTATGAAAATAATAAAATAACTTCTGAATTGTTTCAG
TCAGCCGAAGAATATACTGATTCATTAATGGATCCTGCTATATTAACTTCGTTATCTTCA
AATTTAAATGCAGTCATGTTTTGGTTAGAACGACATTCAAATGACGTTGCTGATGCAAAC
AAAATTTATAAACGTAGACTGGATCTATTTACCATAGTAGCATCTACAATAAATAAATAT
GGAGTGCCTAGACATAATGAAAAATACAGATATGAATACGAGGTGATGAAGGATAAACCG
TATTACTTAGTAACATGGGCTAACTCATCTATAGAAATGCTTATGTCAGTGTTTTCACAT
GAAGATTATTTAATAGCAAAAGAGTTAATAATATTATCATATTCAAATAGATCGACGTTA
GCTAAACTAGTTTCATCTCCAATGTCGATATTAGTTGCATTAATAGATATCAATGGTACG
TTTATTACAAATGAAGAGTTAGAACTTGAATTTTCAGATAAATATGTTAAGGCAATTGTA
CCTGATCAAATTTTCGATGAATTACAGGAAATGATCGACAATATGAGAAAAGCTGGTTTA
GTAGATATACCAAGAATGATTCAAGAATGGTTAGTTGATTGTTCATTAGAGAAATTTACA
CTGATGTCAAAAATTTATTCTTGGTCATTTCATGTTGGATTTAGAAAACAAAAGATGATT
GACGCAGCATTAGACCAATTGAAGACAGAGTACACTGAAGATGTAGATGGTGAGATGTAC
AATGAGTATACAATGTTAATTAGAGATGAAATAGTCAAGATGCTAGAAGTACCAGTTAAA
CATGATGATCATCTACTTCGCGATTCAGAATTAGCCGGATTGTTATCAATGTCATCAGCT
TCAAATGGTGAATCAAGGCAGCTTAAATTTGGTCGTAAAACGATATTTTCAACTAAGAAA
AATATGCATGTCATGGATGATATTGCACATGGAAGATATACTCCGGGTGTCATTCCTCCA
GTAAACGTAGATAGGCCAATTCCATTAGGTCGTAGAGATGTTCCTGGACGAAGAACAAGA
ATTATATTCATATTACCATATGAATACTTTATTGCGCAGCACGCTGTCGTAGAAAAAATG
TTATCATACGCAAAGCATACTAGAGAGTACGCAGAATTTTACTCGCAGTCAAATCAATTG
CTATCATATGGTGATGTTACAAGATTCTTATCCAGTAATTCTATGGTATTATACACAGAC
GTTTCACAATGGGATTCATCACAACATAACACACAGCCATTTAGAAAAGGAATAATTATG
GGTTTAGATATGTTATCCAATATGACTAATGATCCAAAAGTAGTACAAACGCTAAATTTA
TATAAACAAACACAAATTAATCTCATGGATTCATACGTTCAAATACCTGATGGTAATGTA
ATCAAAAAGATTCAGTATGGTGCTGTTGCTTCAGGAGAAAAACAAACTAAGGCAGCTAAT
TCTATAGCTAACTTAGCACTCATTAAAACGGTATTGTCAAGGATTGCAAATAAGTATTCT
TTTATAACCAAAATAATCAGAGTCGATGGTGATGATAATTATGCAGTGCTACAATTTAAC
ACCGATGTCACTAAACAAATGGTCCAAGATGTGTCAAACGATGTGAGATATATATATTCT
AGAATGAATGCTAAAGTTAAAGCATTGGTATCTACAGTCGGTATTGAAATAGCAAAAAGA
TATATAGCAGGAGGAAAAATATTTTTCAGAGCTGGTATAAACTTATTAAATAATGAGAAA
CGTGGGCAAAGTACACAATGGGATCAAGCAGCTATTTTATATTCAAACTACATTGTTAAC
AAATTACGAGGATTTGAGACTGATAGAGAATTTATATTAACTAAAATTATACAAATGACA
TCTGTAGCCATTACTGGATCACTAAGGTTATTTCCGTCAGAACGAGTGTTAACTACTAAT
TCTACATTCAAAGTATTTGACTCAGAAGATTTCATTATAGAATATGGGACAACTAACGAT
GAAGTATATATACAAAGAGCATTTATGTCACTGTCTAGTCAAAAGTCAGGAATAGCTGAT
GAAATAGCTTCTTCACAAACATTTAAAAATTATGTTAACAAATTATCTGACCAATTATTA
ATATCGAAAAACGTAATTGTATCCAAAGGTATAGCTGTAACAGAAAAGGCGAAATTGAAT
TCATATGCACCAGTTTATTTAGAAAAACGTCGTGCGCAAATATCAGCGTTATTAACTATG
TTGCAGAAACCAGTGTCATTTAAATCAAATAAAATTACTATTAATGACATTTTGCGTGAC
ATAAAACCATTTTTTATCACTTCTGAAGCTAATTTGCCAATTCAATACAGAAAATTTATG
CCAACACTACCTAATAATGTCCAATATGTTATACAATGCATAGGATCGAGGACGTATCAA
ATAGAAGATAGTGGGTCAAAATCATCGATTTCGAAGTTAATATCAAAATATTCAGTTTAC
AAACCATCGATTGAAGAACTATATAAAGTTATATCTTTAAGAGAACAAGAAATACAGTTG
TATTTAGTTTCATTAGGAGTTCCACCAGTTGATGCAGGCACGTACGTTGGGTCAAGAATA
TATTCGCAGGATAAGTATAAAATATTAGAATCTTACGTATATAATTTATTATCAATTAAT
TATGGATGTTATCAACTATTCAATTTTAATTCTCCAGATTTAGAGAAACTTATACGAATT
CCTTTTAAAGGCAAGATACCAGCCGTAACATTTATATTGCATCTTTATGCTAAACTTGAA
ATAATAAACTATGCTATTAAGAATGGAGCTTGGATTAGTTTGTTTTGTAACTACCCAAAA
TCTGAAATGATTAAATTATGGAAGAAAATGTGGAATATAACAGCATTACGGTCTCCCTAC
ACTAGTGCGAACTTCTTTCAAGAT
Protein sequence predicted based on nucleotide sequence
MGKYNLILSEYLSFVYNSQSAVQIPIYYSSNSELEKRCIEFHAKCVDSSKKGLSLKPLFE EYKDVIDNATLLSILSYSYDKYNAVERKLVNYAKGKPLEADLTANEIDYENNKITSELFQ SAEEYTDSLMDPAILTSLSSNLNAVMFWLERHSNDVADANKIYKRRLDLFTIVASTINKY GVPRHNEKYRYEYEVMKDKPYYLVTWANSSIEMLMSVFSHEDYLIAKELIILSYSNRSTL AKLVSSPMSILVALIDINGTFITNEELELEFSDKYVKAIVPDQIFDELQEMIDNMRKAGL VDIPRMIQEWLVDCSLEKFTLMSKIYSWSFHVGFRKQKMIDAALDQLKTEYTEDVDGEMY NEYTMLIRDEIVKMLEVPVKHDDHLLRDSELAGLLSMSSASNGESRQLKFGRKTIFSTKK NMHVMDDIAHGRYTPGVIPPVNVDRPIPLGRRDVPGRRTRIIFILPYEYFIAQHAVVEKM LSYAKHTREYAEFYSQSNQLLSYGDVTRFLSSNSMVLYTDVSQWDSSQHNTQPFRKGIIM GLDMLSNMTNDPKVVQTLNLYKQTQINLMDSYVQIPDGNVIKKIQYGAVASGEKQTKAAN SIANLALIKTVLSRIANKYSFITKIIRVDGDDNYAVLQFNTDVTKQMVQDVSNDVRYIYS RMNAKVKALVSTVGIEIAKRYIAGGKIFFRAGINLLNNEKRGQSTQWDQAAILYSNYIVN KLRGFETDREFILTKIIQMTSVAITGSLRLFPSERVLTTNSTFKVFDSEDFIIEYGTTND EVYIQRAFMSLSSQKSGIADEIASSQTFKNYVNKLSDQLLISKNVIVSKGIAVTEKAKLN SYAPVYLEKRRAQISALLTMLQKPVSFKSNKITINDILRDIKPFFITSEANLPIQYRKFM PTLPNNVQYVIQCIGSRTYQIEDSGSKSSISKLISKYSVYKPSIEELYKVISLREQEIQL YLVSLGVPPVDAGTYVGSRIYSQDKYKILESYVYNLLSINYGCYQLFNFNSPDLEKLIRI PFKGKIPAVTFILHLYAKLEIINYAIKNGAWISLFCNYPKSEMIKLWKKMWNITALRSPY TSANFFQD
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pANT7_cGST
Synonyms:
pANT7-cGST
Description:
with tag/fusion/marker assay, Gateway and reg, acceptor (destination), recombinational cloning clone, in vitro transcription expression with attR1 and NAP150 and ccdB and attR2 and GST and CmR and T7 and NAP138 and ColE and AmpR ampicillin resistance in bacterial
Comments:
One in a series of pANT7 vectors made by A. Lau and N. Ramachandran for use with NAPPA arrays. Can be used for cell free expression of the gene insert using human IVTT from Thermo Fisher or rabbit reticulocyte systems
Size (bp):
5964
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Joshua LaBaer
Al Lau
Niroshan Ramachandran
Al Lau
Niroshan Ramachandran
Publications:
PMID:
15232106
Title: Self-assembling protein microarrays
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 bacterial origin of replication
3931
3249
death cassette
ccdB
ccdB death cassette present in 'empty vector' form only (replace with gene of interest)
1876
2085
primer
NAP138
NAP138 reverse sequencing primer 5? TGTTTCGCCATTTATCACCTTC 3?
2405
2384
primer
NAP150
Forward sequencing primer NAP150 5?-CCC ATT GTA TGG GAT CTG ATC-3?
388
408
promoter
T7
T7 transcriptional start sequence
5940
5964
recombination site
attR1
AttR1 site for recombination in empty vector
549
565
recombination site
attR2
AttR2 site for recombination in empty vector
2236
2251
selectable marker
CmR
chloramphenicol resistance
782
1438
selectable marker
AmpR
ampicillin resistance gene
4688
4029
tag
GST
Glutathione transferase (GST) tag
2282
2950
