Gene:
Gene Symbol:
Gene Name:
Original Clone ID:
FLH236985.01F
Keyword:
None
Species:
Vibrio cholerae O1 biovar El Tor str. N16961
Type:
cDNA
Vector Name:
pANT7_cGST
Format:
FUSION
Source:
HIP
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
VcCD00061304
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 3930nts
Open reading frame: 1 to 3930
ATGACTTCGTCACAGCCCACACCCGATTCGGCAGCTCAGCCAAAAGCCAATAGCGCTGCC
AGTTTAAAAAAGGCGCTCGGAGAGTGCTTGATCAAAGACCGTTTTCGTTTCAGTAAACGC
ATTGATGGTGCCAGTAAAATTAAAAATGAATCGGCACGCAACGCGGTATTTGACGAAATC
GCGCTCGATATTGCGCAATCCATGATGGTGGTTGAGCAGCGTAAACAGCAGATGCCCAAA
ATCGAGTATCCTGCGCTGCTGCCAGTTAGCCAAAAACGCGATGATATTGCGCAGGCGATT
GCTCATCATCAAGTGGTGATCGTGGCCGGTGAAACCGGTTCAGGCAAAACCACTCAGCTA
CCGAAAATTTGTGCAGAATTAGGCCGTGGTAAATACGGTTTGATTGGCCACACTCAGCCG
CGCCGTCTTGCTGCGCGATCAGTGGCAAACCGCATTGCCGAAGAGATGGAAACCGAACTC
GGTGGCTTTGTGGGCTATAAAGTTCGCTTTACCGATCAAATCTCGGATCAGACTCAAATC
AAATTGATGACTGACGGTATCTTGCTGGCGGAGATCCAAAACGATCGTTTCCTCAACCAG
TACGACACCATCATTATCGATGAAGCGCACGAGCGTAGCCTCAACATCGACTTTATCTTA
GGCTATCTCAAGCAGCTTTTGCCGCGTCGTCCCGATCTCAAAGTCATCATCACCTCGGCG
ACCATCGACCCTGAGCGCTTCTCGAAGCATTTTAGCAATGCGCCGATCATCGAAGTCTCA
GGCCGTACTTATCCTGTGGAAGTGCGCTATCGCCCTCTGGCGGGGGATGATGACAGCGAA
AGCGATCGCGACCAACTGGAAGGCATTTTCCAAGCCGTGGATGAGCTGTGCGATGAAGGG
CTGGGCGACATTCTGATCTTCATGAACGGTGAGCGCGAAATTCGTGATACCGCGGATGCG
CTTTCAAAGCGCAACCTGCGTGATACGGAAATTGTGCCACTGTATGCACGTTTGTCAGCC
GGTGAGCAGAACAAGATTTTCCAACCTCATGCGGGTCGTCGCATTGTGCTGGCCACCAAC
GTGGCGGAAACCTCGCTAACGGTTCCGGGCATCAAATACGTTATCGACCCAGGTACCGCG
CGGATCAGTCGTTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGATTTCC
CAAGCCAGCGCTAACCAGCGTAAAGGCCGCTGTGGACGTACCGAAGAGGGGATCTGTATC
CGTCTCTATTCGGAAGAGGATTTCTTGTCACGCCCTGAGTTTACTGACCCTGAGATTCTG
CGCACCAACTTAGCCTCGGTTATCTTGCAGATGACGGCATTGGGGCTAGGCGATATTGAA
GCCTTCCCCTTTGTGGAAGCGCCAGATAAGCGCAACATTCAAGATGGTGTGCGTCTGCTC
GAAGAGCTAGGGGCTATCAACGATCAAATCAAAGACCCGAAAAAACGCCTCACTGAAAGT
GGTAAGCAGCTAGCGCGTTTGCCCATTGATCCACGTTTGGCACGCATGGTGCTCGAAGCG
TCTAAATTAGGCTGTTTGAAAGAAGTGATGATTATTGCTTCCGCGTTGTCGATTCAAGAT
CCGCGTGAAAGACCGAGCGACAAGCAGCAATCGGCCGATGACAAACATCGCCGCTTTAAT
CATGAAGATTCAGATTTCCTGACGTTAGTGAACTTATGGCACTACATCGGACAGCAGCAA
AAAGCGTTGACCAGTAACCAGTTCCGCCGTCAGTGCAAGCTTGATTACCTCAACTATTTG
CGTGTGCGCGAATGGCAGGATGTGTACACCCAACTGCATCAATCGACTCGGGAAATGGGT
TTTAAGCTCAATGATGAGCCGGGCAGTTACCATGCGGTGCACAGTGCGATCTTGGTCGGT
TTGTTGTCGCACATCGGTATGAAAGATCAGGAGAAGAACGAGTACCACGGCGCACGTAAC
GCACGTTTCAACATTTTTCCTGCCTCTGGCTTATTTAAAAAGCAGCCGAAATGGGTCATG
TCGGCAGAGCTGGTGGAAACCTCCAAACTGTGGGCGCGCGTGGTTGCGAAAATCGAACCG
GATTGGATTGAGCCACTAGCGAAACACCTGAGCAAGCGCAGTTACAGTGAGCCACATTGG
TCGAAGAAAAATGCGGCGGTGATGGCGTATGAAAAAGTGATGCTGTACGGCATCCCGATT
GTTCCCAAGCGCTTGGTCAACTATGGCACGATTGATCCTGTGCTCAGTCGCGAAATTTTC
ATTCGCAGCGCACTGGTAGAAGGGGATTGGGAAACCAAACACGCCTTCTTCAAACAAAAC
CGCGCGCTACTCGCCGAAGTGGAAGAGTTAGAACACAAATCGCGTCGCCGCGATATTCTG
GTTGATGATGAAGAGTTGTTCCAATTCTACGACCAGCGTGTCGGTACCGAAGTGGTGTCT
GGTCGCCATTTTGATGCGTGGTGGAAAACCGCTAGTCGTAAAACGCCGGATCTGCTCAGC
TTTGAAAAAGAGATGCTGTTCAAAGGCGATGCCAGCCACATTACCGATCTGGATTACCCG
AATTTCTGGCATCAAGGCAATCTGAAACTCAAACTCAGTTACCAGTTTGAGCCGGGCGAG
AACAGTGACGGTGTGACGGTACACATTCCGCTGCCAATCTTAAATCAAGTTGAGCCACAT
GGCTTTGACTGGCAGATTCCCGGTTTGCGCCATGAGTTGGTGGTGAGCTTAATTAAATCG
CTACCGAAAACGCTGCGTAAAAACTTTGTGCCAGCCCCCAATTACGCTGACGCTTTTTTG
GCGCGTGTAACACCGTTTGAAATGCCGCTGCTCGATGCAATGGAAAAAGAGCTGCGCCGC
ATGACGGGTGTGACGGTGCTGCGTGAAGATTGGAAACTCGATCAACTGCCTGCGCATTTA
AAAATTACTTATCGCGCGGTGGATCATCGCAATCGCAAGCTCAATGAAAGCTGCGATCTG
CATGAGCTGAAAGAGAGCTTGAAAGAGAAAGTGCAAGAGACACTTTCACAAGTGGCCGAT
GACGATATCGAGCAGCGCGATCTGCATACGTGGTCGTTTGGTGAGCTACCGAAAGTGTAC
CAGCAAAAGCGTGGTGGCTTTGAAGTTAGAGCTTATCCGGCGTTAGTCGATAAGAAAGAC
AGCGTCGAAATCAAACTGTTTGAAACCGAGCAAGAGCAGCTTAGCGCGATGCGTGCCGGT
CAGCGCCGTTTGATTTTGCTTAACGTGCCATCACCGATCAAATATCTGCACGCCAATCTG
CCGAACAAATCTAAACTCGGTTTGTACTTTAACCCGTATGGCAAAGTGCTCGATTTGATT
GATGACTGCATTGCCTGCGGCGTTGATAAGCTGATTGAAGAGCGCGGCGGCATGGTGTGG
GAGCCACAAGCATTTGAAGCGCTCAAAGAGCATGTGCGTGCCGAGCTTGGCGATACAGTA
GTTGAGATTGCCAAGCAGGTAGAAACCATTTTGACCACGGCTTACAACATCAATAAGCGT
TTGAAAGGTAAGGTGGATTTCACGATGGCGTTTGCGCTTTCTGATGTGAAAGCACAAATC
GAAGGGCTGATTTTCAGCGGCTTTGCGACTGAGTGCGGTTGGAAACGTCTGCCGGACATT
CTGCGTTACATGCGCGCGATTGAACGCCGGATGGAAAAACTGCCGGTCGATCCCAACAAA
GATCGTCTGCATATGCTGAAAATTGAATCGGTAGCCAACAAGTATAAAGAGCTGCTGAAC
AAGATCCCGAAAGGGATGGCGATTCCCGATAACGTGCGAGAAATCCGCTGGATGCTCGAA
GAGTTACGCGTGAGTTATTTTGCTCAGCAATTGGGTACGCCGTATCCGGTTTCGGATAAG
CGGATCATCAACGCGATTGAGGCTTGTTTG
Protein sequence predicted based on nucleotide sequence
MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEACL
Coding Sequence Details
Insert Sequence Verified?:
N
Verification Method:
Insert was fully sequenced in parent vector
Reference Sequence Annotations:
Start on reference sequence
1
End on reference sequence
3930
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Bacterial Selection Condition:
100 ug/mL ampicillin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Commonly used conditions for ampicillin resistant plasmid clones.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pANT7_cGST
Synonyms:
pANT7-cGST
Description:
with tag/fusion/marker assay, Gateway and reg, acceptor (destination), recombinational cloning clone, in vitro transcription expression with attR1 and NAP150 and ccdB and attR2 and GST and CmR and T7 and NAP138 and ColE and AmpR ampicillin resistance in bacterial
Comments:
One in a series of pANT7 vectors made by A. Lau and N. Ramachandran for use with NAPPA arrays. Can be used for cell free expression of the gene insert using human IVTT from Thermo Fisher or rabbit reticulocyte systems
Size (bp):
5964
Parent Vector:
None
Properties:
Gateway, acceptor (destination), in vitro transcription, recombinational cloning, with tag/fusion/marker
Author Name:
Joshua LaBaer
Al Lau
Niroshan Ramachandran
Al Lau
Niroshan Ramachandran
Publications:
PMID:
15232106
Title: Self-assembling protein microarrays
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ColE
ColE1 bacterial origin of replication
3931
3249
death cassette
ccdB
ccdB death cassette present in 'empty vector' form only (replace with gene of interest)
1876
2085
primer
NAP138
NAP138 reverse sequencing primer 5? TGTTTCGCCATTTATCACCTTC 3?
2405
2384
primer
NAP150
Forward sequencing primer NAP150 5?-CCC ATT GTA TGG GAT CTG ATC-3?
388
408
promoter
T7
T7 transcriptional start sequence
5940
5964
recombination site
attR1
AttR1 site for recombination in empty vector
549
565
recombination site
attR2
AttR2 site for recombination in empty vector
2236
2251
selectable marker
CmR
chloramphenicol resistance
782
1438
selectable marker
AmpR
ampicillin resistance gene
4688
4029
tag
GST
Glutathione transferase (GST) tag
2282
2950
