SLC11A1 (Homo sapiens) in pPICZa

Explanation of Terms

Gene:
Gene Symbol:  SLC11A1
Gene Name:  solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1
Original Clone ID:
TPDB-0015
Keyword:
codon-optimized sequence
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pPICZa
Format: 
CLOSED
Source:
Center for the X-ray Structure Determination of Human Transporters
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
Geoffrey Chang
Tuan Nguyen
PSI:Biology
Center for the X-ray Structure Determination of Human Transporters
HsCD00627293
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1647nts
Open reading frame: 1 to 1647

ACCGGCGACAAGGGTCCACAAAGATTGTCTGGTTCTTCCTATGGATCCATCTCAAGTCCC
ACAAGCCCTACTAGTCCCGGTCCGCAGCAAGCCCCACCTAGAGAGACCTACCTGTCTGAA
AAGATCCCTATTCCCGATACCAAACCTGGTACATTCTCCTTAAGAAAGCTGTGGGCTTTT
ACTGGACCAGGCTTCTTGATGTCTATCGCCTTTCTGGACCCTGGTAACATTGAGTCCGAT
TTGCAAGCCGGTGCAGTCGCTGGATTCAAATTGCTGTGGGTCCTTTTATGGGCTACCGTT
CTGGGTCTCCTATGTCAGAGACTGGCTGCCAGACTTGGTGTTGTCACTGGAAAGGACTTG
GGTGAAGTTTGCCACCTGTACTATCCAAAAGTCCCTAGAACAGTTCTGTGGCTTACTATC
GAGTTGGCCATTGTCGGATCTGATATGCAGGAAGTTATCGGTACTGCCATTGCATTTAAC
CTGCTTTCCGCTGGTAGAATCCCATTGTGGGGTGGAGTCCTGATCACTATTGTTGACACC
TTCTTTTTCTTATTCTTGGATAATTACGGACTTAGAAAGTTGGAGGCTTTTTTCGGTTTA
CTCATCACCATTATGGCCCTGACTTTTGGTTACGAGTATGTGGTAGCCAGACCAGAACAA
GGAGCATTGCTGAGAGGTCTGTTCCTTCCATCTTGTCCTGGTTGCGGACATCCAGAGCTT
TTACAGGCTGTCGGAATCGTTGGCGCCATCATTATGCCTCATAACATTTATTTGCACTCT
GCCCTGGTCAAATCCCGTGAAATCGACAGAGCTAGACGTGCCGATATTAGAGAGGCTAAT
ATGTACTTCTTGATCGAAGCAACCATTGCTCTGTCAGTTAGTTTTATAATTAACTTGTTC
GTCATGGCAGTTTTTGGTCAGGCTTTCTACCAAAAGACTAATCAGGCAGCGTTTAACATC
TGTGCAAATAGCTCGCTGCACGACTACGCCAAAATTTTCCCAATGAACAATGCCACCGTG
GCAGTTGATATCTATCAAGGCGGGGTCATTCTGGGATGCCTTTTCGGTCCTGCCGCATTG
TACATCTGGGCTATTGGACTCTTGGCTGCCGGTCAATCCTCAACTATGACCGGAACATAC
GCCGGTCAGTTTGTCATGGAGGGTTTCTTAAGGTTGCGATGGTCTCGCTTTGCTCGTGTT
CTGCTTACCAGATCCTGTGCTATCTTGCCAACTGTCCTGGTGGCCGTTTTCAGGGACTTG
CGTGATCTGTCTGGTCTTAACGACTTACTCAATGTCTTGCAATCCTTGCTGCTTCCATTT
GCCGTTTTGCCTATTCTGACGTTCACCTCCATGCCAACCCTGATGCAGGAGTTCGCTAAC
GGTTTACTCAATAAGGTCGTGACTAGTAGCATCATGGTCTTGGTGTGTGCCATTAACCTG
TACTTTGTTGTCTCCTATCTTCCTTCATTGCCACACCCTGCTTATTTCGGATTGGCAGCT
CTGCTTGCCGCAGCTTACCTGGGTCTTTCTACCTATTTGGTTTGGACTTGTTGCCTGGCT
CATGGAGCCACCTTTTTGGCTCACTCTTCCCACCATCACTTCCTGTACGGTTTATTGGAG
GAAGATCAGAAGGGAGAGACTTCCGGT

Protein sequence predicted based on nucleotide sequence

TGDKGPQRLSGSSYGSISSPTSPTSPGPQQAPPRETYLSEKIPIPDTKPGTFSLRKLWAF
TGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDL
GEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDT
FFFLFLDNYGLRKLEAFFGLLITIMALTFGYEYVVARPEQGALLRGLFLPSCPGCGHPEL
LQAVGIVGAIIMPHNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLF
VMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVAVDIYQGGVILGCLFGPAAL
YIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDL
RDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAINL
YFVVSYLPSLPHPAYFGLAALLAAAYLGLSTYLVWTCCLAHGATFLAHSSHHHFLYGLLE
EDQKGETSG

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
NGS Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  Pichia    Marker:  zeocin
Host Type:  bacterial    Marker:  zeocin
Bacterial Selection Condition: 50 ug/ml zeocin
Growth Condition: Growth in low salt LB with 50ug/ml zeocin at 37 degrees C
Comments: None
Protein Expression Results:
SolubleProtein: Not_Applicable
ProteinPurified: Not_Tested
ProteinExpressed: Tested_Not_Found
Find experimental protocols in TPDB-0015
Recommended expression in:
Not Applicable