UPF1 (Homo sapiens) in P2RP3

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
None
Keyword:
Sequence Verified: Yes; 3'UTR length: 2247; Forward Primer: GGGCTGTCCCAGTATTAA; Reverse Primer: GGCAGGGGTCGCCCTTCA
Species:
Homo sapiens
Type:
3'UTR
Vector Name:
P2RP3
Format: 
None
Source:
Center for Personalized Diagnostics
Description:
Please cite: Kotagama, K., Babb, C.S., Wolter, J.M., Murphy, R.P. and Mangone, M. "A human 3'UTR clone collection to study post-transcriptional gene regulation". BMC Genomics 16, 1036 (2015).
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
PMID: 26645212
Title: A human 3'UTR clone collection to study post-transcriptional gene regulation
Authors:
Center for Personalized Diagnostics
Marco Mangone
Kasuen Kotagama
HsUT00698169
Price: 
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AVAILABLE
No restriction
Special MTA: None
Insert sequence: 2247nts
Open reading frame: 1 to 2247

TGGCGGGGTGACGGGGCTGTCCCAGTATTAAAAGGCAAGCCCCCCTGGAGCAGGCCTGGC
CCCACCCCAGCCTCAAGGAGAAGGATGGGAGGGGGCTCTCCCCAGGGAGCTGCACTGGAG
GGGTGGTATCTGGAAATGTGTGCTGTGCCTGGTGGGGGTCATAGGCCCTCAGGGCCAGCT
TGGCCTGTGCCCTTCACTGCTAGTCAGGGTGGCTCCTCACCCCACCCTACCCCATCCTGT
CTGCTCCGGGGACCACCGCGGGACCTCAGTTTCCTCATCAGAGTCGGGGAGGGCAGCTCG
GGCTCTCCCTCACTGTCCTGTGTGCTGGGTACCTGTGGGGCTCAGGTCGCAGCCTCTCAC
CGCCTCCTGCCCTTCTCCCTCCTGACAGGTGGCGGCGGAAGAGCTAAGCAACGTGGCTTA
GTCCATCAGCATCTTATTCTGGGTAATAAAAAATAAAAATAAACGGATACCTGTTTTCCA
CTGCTAAAACTGAAGCACCACTGTGTGAGCAACAGGAAGGGAGAGCGCACGAGGGAGAGG
AGCCGAGGCCGAGCGCCCCCTGCTGGCCCGCGGCGGCGAGGAGCAGAGGGAGCGGAGGAG
GGGCCGGCCCGCGGGAGCCGCGGCCACCAGGAGGCCCCGCTCCGTCCCATCGGGGCTGCG
GCCAGGGCGGAGGGAGGAAGACCCTCATCTCAGAGTAGCCCTTTCCTCTGTTCTTTTATT
TCTTTTTCTCTTTGATTGAAAGGGGACTACGTCTTAGCAGGAAAAAAAACTTCGCATTTC
TGTGCCCGAGCAGGCTCCTTGCAAAGACAGCAGCGTGCGGGGCAGAGCCCCGGGAGGGCG
CGTCTGTCCACGCCTACCGGACGCGCCGAGGTCGCGCTGCCTGTGTTCTCCGAGGGCCTT
CATTTAAAGAAAATAAGGGTGTTTTGGGTTTTTCTCTTTGTTTTTTTCAAGATTCTTTTA
AAGGAGTACTGAAGAATACTTTCCTAAGTTTGTCTGTAAAATCTTAGCGGTGGACCTGGG
AGATTTGAGAAGCTTCCAGAAACAGTTTAAACAAGCCAGCGCTACTGGAGAAGAGGAGCA
ACACCTGTGCCGCGGCCGGAGGAGTTTTGTTGTTGGTTTTAGCTTCCAGTGGCTTCTTTC
TGCGGGGCATCAGGCTGCTGGGGTAGCCGCCCGCCGAGCCTGGAAGCTGCTCGTTCTCCG
CTGGACTCAGAAGCCAAGCTGCTTCCCGCCTAGACTCGGCGCAGGGCCCCGCACCGGTGA
GGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTGTGGCCAGGA
GGCGAGAAGGTGGCTGTTCCCGGATTGACGGCTTTTTCCCGGGGGCCTTTGGAAGATTTG
GTGGAAGGACAAGAGGGCCTGTCCCTGTCCCCGTCCCCAGGAGGTACCGACAGTCCCTGT
GCTGGTTAGACACGGAGCGCTGCACACCGAAAGCCCAAATTGGGAGCTCTGCCTGCCGGC
AACTTTGCTGATGGGGTGATTGCTGCTTCTGGGGGGTAAGGAAACAAGTTACAGAAATTA
CCGCGTTCTGTGTGAAGGGACTGAGGGTGTGGTGTCATTGGCAGAGGGTCATTTTAGGAG
AGCTGCCCCAGCCCCTCGAACGCCTGGCTTGGGGTGTCATTCTGCCTGGCGGCCAGGCCT
CCAGCTTCCCCTGCCCCGGGCCTGGGGCTGTCACTGGCCCTGATCCGAACACCTCCAGAT
TCCGGCTTCTACATGGGACAGACGGGGACGCACAGGCCACCTTCCTTCTGGCAGGGACTC
TTATTTATTCCCATTGCTCTAGGGCTTTCGGTTTCCCCTTCTTCCGGTAGGCCGCGTAGA
GGCATGCACCGGGTAGGTTTCCGCGGTGACCCCGCGGCGGCCTGAGGGACGCTCCCTGCC
CCATCCCGGCTGTTGGGCTGGGCCGCTTTGCCTCTGCTTCGCCCTGTGCTGTGTTCTCCA
GCTTTGTAGCAGCAGCCTTGACAAACCCAGGCGCACTGTACCAAGGCAATGTAACTTTTG
ATTTTCGGTCAATTTAAGTTCTTTTGTCACCAAATATTAATAAACAGTTTTGACTTCACA
CCAAGGTTGGATAAACTGCAGGGGGTGGAGGGTGCTGGGGTTTTGCCTTGGCTGAGTGAC
GGGTTGGGGTGTGAAGGAGGCCAGAGGGAGACAGGCAAAGCCCAGAAGGGACAGGTCTGC
CTTGCAGGACTGAAGGGCGACCCCTGCC

Protein sequence predicted based on nucleotide sequence

WRGDGAVPVLKGKPPWSRPGPTPASRRRMGGGSPQGAALEGWYLEMCAVPGGGHRPSGPA
WPVPFTASQGGSSPHPTPSCLLRGPPRDLSFLIRVGEGSSGSPSLSCVLGTCGAQVAASH
RLLPFSLLTGGGGRAKQRGLVHQHLILGNKK*K*TDTCFPLLKLKHHCVSNRKGERTRER
SRGRAPPAGPRRRGAEGAEEGPARGSRGHQEAPLRPIGAAARAEGGRPSSQSSPFLCSFI
SFSL*LKGDYVLAGKKTSHFCARAGSLQRQQRAGQSPGRARLSTPTGRAEVALPVFSEGL
HLKKIRVFWVFLFVFFKILLKEY*RILS*VCL*NLSGGPGRFEKLPETV*TSQRYWRRGA
TPVPRPEEFCCWF*LPVASFCGASGCWGSRPPSLEAARSPLDSEAKLLPA*TRRRAPHR*
GRCFWPHCEGPWPGLALWPGGEKVAVPGLTAFSRGPLEDLVEGQEGLSLSPSPGGTDSPC
AG*TRSAAHRKPKLGALPAGNFADGVIAASGG*GNKLQKLPRSV*RD*GCGVIGRGSF*E
SCPSPSNAWLGVSFCLAARPPASPAPGLGLSLALIRTPPDSGFYMGQTGTHRPPSFWQGL
LFIPIALGLSVSPSSGRPRRGMHRVGFRGDPAAA*GTLPAPSRLLGWAALPLLRPVLCSP
AL*QQP*QTQAHCTKAM*LLIFGQFKFFCHQILINSFDFTPRLDKLQGVEGAGVLPWLSD
GLGCEGGQRETGKAQKGQVCLAGLKGDPC

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: kanamycin
Growth Condition: Growth in 50 ug/ml of kanamycin in LB at 37 degrees
Comments: None
Protein Expression Results:
None
Recommended expression in:
Not Applicable