Gene:
Gene Symbol:
SMARCC2
Gene Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Original Clone ID:
FLH213351.01X
Keyword:
None
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pJP1520
Format:
CLOSED
Source:
HIP
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
HsCD00074689
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
ATGGCGGTGCGGAAGAAGGACGGCGGCCCCAACGTGAAGTACTACGAGGCCGCGGACACC
GTGACCCAGTTCGACAACGTGCGGCTGTGGCTCGGCAAGAACTACAAGAAGTATATACAA
GCTGAACCACCCACCAACAAGTCCCTGTCTAGCCTGGTTGTACAGTTGCTACAATTTCAG
GAAGAAGTTTTTGGCAAACATGTCAGCAATGCACCGCTCACTAAACTGCCGATCAAATGT
TTCCTAGATTTCAAAGCGGGAGGCTCCTTGTGCCACATTCTTGCAGCTGCCTACAAATTC
AAGAGTGACCAGGGATGGCGGCGTTACGATTTCCAGAATCCATCACGCATGGACCGCAAT
GTGGAAATGTTTATGACCATTGAGAAGTCCTTGGTGCAGAATAATTGCCTGTCTCGACCT
AACATTTTTCTGTGCCCAGAAATTGAGCCCAAACTACTAGGGAAATTAAAGGACATTATC
AAGAGACACCAGGGAACAGTCACTGAGGATAAGAACAATGCCTCCCATGTTGTGTATCCT
GTCCCGGGGAATCTAGAAGAAGAGGAATGGGTACGACCAGTCATGAAGAGGGATAAGCAG
GTTCTTCTGCACTGGGGCTACTATCCTGACAGTTACGACACGTGGATCCCAGCGAGTGAA
ATTGAGGCATCTGTGGAAGATGCTCCAACTCCTGAGAAACCTAGGAAGGTTCATGCAAAG
TGGATCCTGGACACCGACACCTTCAATGAATGGATGAATGAGGAAGACTATGAAGTAAAT
GATGACAAAAACCCTGTCTCCCGCCGAAAGAAGATTTCAGCCAAGACACTGACAGATGAG
GTGAACAGCCCAGATTCAGATCGACGGGACAAGAAGGGGGGAAACTATAAGAAGAGGAAG
CGCTCCCCCTCTCCTTCACCAACCCCAGAAGCAAAGAAGAAAAATGCTAAGAAAGGTCCC
TCAACACCTTACACTAAGTCAAAGCGTGGCCACAGAGAAGAGGAGCAAGAAGACCTGACA
AAGGACATGGACGAGCCCTCACCAGTCCCCAATGTAGAAGAGGTGACACTTCCCAAAACA
GTCAACACAAAGAAAGACTCAGAGTCGGCCCCAGTCAAAGGCGGCACCATGACCGACCTG
GATGAACAGGAAGATGAAAGCATGGAGACGACGGGCAAGGATGAGGATGAGAACAGTACG
GGGAACAAGGGAGAGCAGACCAAGAATCCAGACCTGCATGAGGACAATGTGACTGAACAG
ACCCACCACATCATCATTCCCAGCTACGCTGCCTGGTTTGACTACAATAGTGTTCATGCC
ATTGAGCGGAGGGCTCTCCCCGAGTTCTTCAACGGCAAGAACAAGTCCAAGACTCCAGAG
ATCTACCTGGCCTATCGAAACTTTATGATTGACACTTACCGACTGAACCCCCAAGAGTAT
CTTACCTCTACCGCCTGCCGCCGAAACCTAGCGGGTGATGTCTGTGCCATCATGAGGGTC
CATGCCTTCCTAGAACAGTGGGGTCTTATTAACTACCAGGTGGATGCTGAGAGTCGACCA
ACCCCAATGGGGCCTCCGCCTACCTCTCACTTCCATGTCTTGGCTGACACACCATCAGGG
CTGGTGCCTCTGCAGCCCAAGACACCTCAGGGCCGCCAGGTTGATGCTGATACCAAGGCT
GGGCGAAAGGGCAAAGAGCTGGATGACCTGGTGCCAGAGACGGCTAAGGGCAAGCCAGAG
CTGCAGACCTCTGCTTCCCAACAAATGCTCAACTTTCCTGACAAAGGCAAAGAGAAACCA
ACAGACATGCAAAACTTTGGGCTGCGCACAGACATGTACACAAAAAAGAATGTTCCCTCC
AAGAGCAAGGCTGCAGCCAGTGCCACTCGTGAGTGGACAGAACAGGAAACCCTGCTTCTC
CTGGAGGCACTGGAAATGTACAAAGATGACTGGAACAAAGTGTCCGAGCATGTGGGAAGC
CGCACACAGGACGAGTGCATCTTGCATTTTCTTCGTCTTCCCATTGAAGACCCATACCTG
GAGGACTCAGAGGCCTCCCTAGGCCCCCTGGCCTACCAACCCATCCCCTTCAGTCAGTCG
GGCAACCCTGTTATGAGCACTGTTGCCTTCCTGGCCTCTGTCGTCGATCCCCGAGTCGCC
TCTGCTGCTGCAAAGTCAGCCCTAGAGGAGTTCTCCAAAATGAAGGAAGAGGTACCCACG
GCCTTGGTGGAGGCCCATGTTCGAAAAGTGGAAGAAGCAGCCAAAGTAACAGGCAAGGCG
GACCCTGCCTTCGGTCTGGAAAGCAGTGGCATTGCAGGAACCACCTCTGATGAGCCTGAG
CGGATTGAGGAGAGCGGGAATGACGAGGCTCGGGTGGAAGGCCAGGCCACAGATGAGAAG
AAGGAGCCCAAGGAACCCCGAGAAGGAGGGGGTGCTATAGAGGAGGAAGCAAAAGAGAAA
ACCAGCGAGGCTCCCAAGAAGGATGAGGAGAAAGGGAAAGAAGGCGACAGTGAGAAGGAG
TCCGAGAAGAGTGATGGAGACCCAATAGTCGATCCTGAGAAGGAGAAGGAGCCAAAGGAA
GGGCAGGAGGAAGTGCTGAAGGAAGTGGTGGAGTCTGAGGGGGAAAGGAAGACAAAGGTG
GAGCGGGACATTGGCGAGGGCAACCTCTCCACCGCTGCTGCCGCCGCCCTGGCCGCCGCC
GCAGTGAAAGCTAAGCACTTTGCTGCTGTTGAGGAAAGGAAGATCAAATCTTTGGTGGCC
CTGCTGGTGGAGACCCAGATGAAAAAGTTGGAGATCAAACTTCGGCACTTTGAGGAGCTG
GAGACTATCATGGACCGGGAGCGAGAAGCACTGGAGTATCAGAGGCAGCAGCTCCTGGCC
GACAGACAAGCCTTCCACATGGAGCAGCTGAAGTATGCGGAGATGAGGGCTCGGCAGCAG
CACTTCCAACAGATGCACCAACAGCAGCAGCAGCCACCACCAGCCCTGCCCCCAGGCTCC
CAGCCTATCCCCCCAACAGGGGCTGCTGGGCCACCCGCAGTCCATGGCTTGGCTGTGGCT
CCAGCCTCTGTAGTCCCTGCTCCTGCTGGCAGTGGGGCCCCTCCAGGAAGTTTGGGCCCT
TCTGAACAGATTGGGCAGGCAGGGTCAACTGCAGGGCCACAGCAGCAGCAACCAGCTGGA
GCCCCCCAGCCTGGGGCAGTCCCACCAGGGGTTCCCCCCCCTGGACCCCATGGCCCCTCA
CCGTTCCCCAACCAACAAACTCCTCCCTCAATGATGCCAGGGGCAGTGCCAGGCAGCGGG
CACCCAGGCGTGGCGGACCCAGGCACCCCCCTGCCTCCAGACCCCACAGCCCCGAGCCCA
GGCACGGTCACCCCTGTGCCACCTCCACAGTAG
Protein sequence predicted based on nucleotide sequence
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA AVKAKHFAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS PFPNQQTPPSMMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPPQ*
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Insert was fully sequenced in parent vector; Verification by restriction enzyme digest
Reference Sequence Annotations:
Start on reference sequence
33
End on reference sequence
3425
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
ampicillin
Host Type: bacterial Marker: chloramphenicol
Host Type: mammalian Marker: puromycin
Host Type: bacterial Marker: chloramphenicol
Host Type: mammalian Marker: puromycin
Bacterial Selection Condition:
100 ug/mL ampicillin, 34 ug/mL chloramphenicol
Growth Condition:
Growth with the double antibiotic in LB supplemented with 7% sucrose at 37 degrees is recommended.
Comments:
Conditions for Creator-type vectors in with insert (recombined) form. Selection differs for the unrecombined, empty form of the vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pJP1520
Synonyms:
''
Sequencing Primer:
Forward:
JPO113
Reverse:
Unknown
Description:
Retroviral expression vector with CMV promoter, MMV-type 5p and 3p LTRs; amp resistance (puromycin for mammalian selection); recombinational cloning.
Comments:
One in a series of pJP# vectors that includes puroR, blastR, hygR vectors made by J. Pearlberg at HIP
Size (bp):
7894
Parent Vector:
None
Properties:
Creator, acceptor (destination), loxP, mammalian expression, mammalian transduction, retroviral vector
Author Name:
Ed Harlow
Joseph Pearlberg
Joseph Pearlberg
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
bacterial origin
ori
bacterial origin of replication
5659
6341
gene fragment
gag/pol/env
non-functional gag/pol/env for packaging efficiency
1871
2644
primer
JPO113
forward sequencing primer: GCGGTTTTGGCAGTACATCAATGGGCG
3555
3581
primer site
PBSQ
primer binding sequence (glutamine tRNA primer binding site)
1140
1156
promoter
bacterial
bacterial promoter (for chlR ORF in Creator-type inserts)
3879
4005
recombination site
LoxP
LoxP site for recombinational cloning
3651
3684
selectable marker
AmpR
ampicillin resistance gene (beta-lactamase)
6237
7094
viral LTR
5p LTR
5p viral LTR (MPSV U3, R, U5)
550
1139
viral LTR
3p LTR
3p viral LTR (MPSV U3, R, U5)
3962
4551
