Gene:
Gene Symbol:
SCAND3
Gene Name:
SCAN domain containing 3
Original Clone ID:
FLH267146.01L
Keyword:
STOP codon removed based on OC annotation
Species:
Homo sapiens
Type:
cDNA
Vector Name:
pDONR201
Format:
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
The ORFeome Collaboration
HsCD00082522
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
ATGGAAGCAGTCTCTAGGGTCTTCCCAGCCTTGGCTGGCCAGGCTCCAGAAGAACAAGGG
GAGATTATCAAAGTAAAGGTTAAAGAAGAAGACCACACTTGGGATCAGGAATCAGCCCTA
CGTAGGAATTTGTCTTATACCAGGGAACTCTCTCGTCAGCGCTTCAGGCAGTTCTGCTAT
CAGGAGACACCTGGGCCCAGGGAGGCTCTGAGTCAACTGCGGGAACTTTGCCGTCAGTGG
CTGAACCCAGAGATACATACCAAGGAGCAGATCCTGGAATTGTTGGTGCTGGAGCAGTTC
CTGACCATCCTGCCTGAGGAGCTCCAGTCTTGGGTGCGGGAGCATAATCCTGAGAGTGGA
GAAGAGGTGGTGACTTTGCTGGAAGATTTGGAGAGGGAGCTTGATGAACCTAGACAGCAG
GTCTCACAGGGCACATATGGGCAGGAAGTTTCTATGGAAGAAATGATCCCTCTGGATTCT
GCAAAGGAGTCTTTAGGCACCCAGCTTCAGTCTATGGAAGATAGAATGGAATGTGAATCT
CCAGAGCCACACCCACTTCAAGATAATGGGTCATTTTTGTGGTTTTCCATGATGTCTCAA
AGCATGGGTGGTGATAACCTCAGTAGCTTAGATACTAATGAAGCAGAAATTGAACCAGAA
AACATGAGAGAAAAGTTCTTCAGAAGCTTAGCAAGGTTACTGGAAAACAAAAGTAATAAT
ACTAAGATATTTTCTAAAGCAAAGTACTGTCAGTTGATAAAGGAAGTGAAAGAAGCTAAA
GCTAAGGCGAAAAAGGAATCAGTTGACTACCGTCGCTTGGCTAGATTTGATGTTATCCTT
GTACAAGGAAATGAGAAGCTAATTGAGGCTGTAAATGGGGAAACAGATAAAATACGGTAT
TACTTACACAGTGAGGACTTATTTGACATTCTGCATAATACACATCTCAGCATTGGACAT
GGTGGACGTACTCGCATGGAGAAAGAGTTACAAGCGAAATACAAGAACATCACAAAAGAA
GTTATAATGCTGTATCTGACCCTCTGTAAACCATGCCAACAGAAAAATTCAAAACTCAAG
AAGGTTCTAACATCAAAATCAATTAAGGAAGTTAGTTCAAGATGCCAAGTAGATCTTATA
GACATGCAGTTGAATCCTGATGGGGAGTACAGATTTATTTTGCATTATCAAGATCTCTGT
ACAAAGTTAACTTTTTTGCGGTCATTAAAGTCTAAAAGGCCTACGGAAGTTGCACATGCT
CTTTTAGATATATTTACAATTATTGGAGCACCCAGTGTCCTACAATCTGACAATGGGAGG
GAATTTTCAAGCCAGGTTGTCAGTGAACTCAGTAATATTTGGCCAGAATTGAAAATTGTC
CATGGGAAGTCTCAGACCTGCCAAAGCCAGAGTTCTGCAGAACAAACTGAGGATATCCGA
AAGAGGATTTTCTCCTGGATGCAAACTAACAACTCATCACACTGGACTGAATTTTTGTGG
TTCATTCAGATGTCCCAAAATCAGCCCTATCACAGAAGCATGCAACAGACTCCATGTGAA
AGTGCATTTAGCTCTGAAGCTAAACTGGGCTTGTCCCATTCTCAGCTAACTGAAGAACTT
GTTGCCAGCTTGCATACAGAAAATGAATTAGATCAGGCTGACAAAGAGTTAGAAAATACT
TTAAGAGCCCAGTATGAAGAAAACATTGAGACTGGAACAGACAGTAGTGATATTGAAGAG
AATCTTTCTGTCACTCCTAAGGTGGCTGAAAAAAGCCCTCCTGAGAGCAGACTAAGATTT
TTATCCTGTGTAGTTTGTGAAAAAGAATGCACAGGTGTTAATAGTTGTATATCATGTGAT
GGAAATATCCATGCAATTTGTGGAGTGCCCTCTCAACATGGGACTGAGGGCTGTGGTCGG
CAAATAACTTGTAGCCTTTGCTATGAAACCAGCACAATGAAGAGGAAACATGATGAGATT
CAAAGAAGTTTGCCTGTTAAACCTTCCAAAATGCTAAAGCCATCAGGGACACCATTTTCA
CCAGACAAAGTAGGAGACTGGATGGCGAAACAAGCTTCACTGGACTTTTTTGTCAAGAAA
AGACATGCCTTTTCTGAACACAGTAGTAGTAATAAAAGAAATGTTAACAATAGAAGTTAT
CCTGAAGAAGGGAAAACCAAAAGAGTTCATGCTAGTTTCACTCGGAAATATGATCCTTCA
TATATTGAGTTTGGTTTTGTAGCTGTAATTGATGGTGAAGTACTAAAACCACAGTGTATT
ATTTGTGGAGATGTACTGGCTAATGAAGCAATGAAACCATCAAAACTTAAGCGACATTTA
TATTCAAAACATAAAGAAATAAGTTCACAACCAAAAGAATTCTTTGAAAGAAAGAGTAGT
GAATTGAAAAGCCAACCAAAGCAGGTGTTCAACGTTTCTCATATAAACATTAGTGCTTTG
CGGGCTTCATATAAAGTAGCACTTCCGGTTGCCAAGTCTAAAACACCATACACAATTGCT
GAGACACTAGTGAAAGACTGCATCAAAGAAGTTTGCTTGGAAATGTTGGGTGAATCTGCA
GCAAAGAAGGTAGCTCAGGTACCACTTTCCAATGACACCATAGCTCGACGTATTCAGGAA
CTGGCTAATGATATGGAAGATCAACTCATAGAACAAATAAAACTAGCAAAGTATTTTTCA
TTGCAACTTGATGAATGCAGAGATATTGCTAACATGATAATTCTTTTAGTCTATGTGAGG
TTTGAACATGATGATGATATAAAGGAAGAGTTCTTTTTTTCAGCCTCTTTGCCTACAAAC
ACAACTAGCTCAGAACTGTATGAAGCTGTAAAGAATTATATTGTTAACAAATGTGGTTTG
GAATTTAAATTTTGTGTAGGAGTATGTTCTGATGGTGCAGCTTCAATGACAGGAAAACAT
TCTGAAGTGGTAACCCAGATTAAGGAACTTGCGCCAGAATGTAAAACAACACATTGCTTC
ATTCATCGAGAAAGTCTTGCCATGAAAAAAATATCAGCTGAACTAAATAGTGTACTTAAT
GATATAGTAAAAATTGTGAATTATATAAAATCTAATTCATTGAATTCAAGATTATTCTCT
TTATTATGTGATAATATGGAAGCTGATCATAAGCAACTGTTACTGCATGCTGAGATACGG
TGGTTATCACGGGGAAAAGTTCTGTCAAGAATGTTTGAAATACGAAATGAACTCTTAGTG
TTTCTGCAAGGCAAGAAACCCATGTGGTCCCAACTTTTTAAAGATGTGAATTGGACAGCC
AGACTTGCTTATTTGTCTGATATCTTCAGTATTTTTAATGATCTTAATGCTTCTATGCAA
GGGAAGAATGCAACTTATTTTTCAATGGCAGATAAAGTTGAAGGACAAAAACAGAAGTTA
GAAGCTTGGAAAAACAGAATTTCTACAGATTGTTATGACATGTTTCATAATTTAACAACA
ATTATCAATGAAGTAGGTAATGATCTTGATATTGCACATCTGCGAAAAGTTATCAGTGAA
CATCTTACAAATTTGTTAGAATGTTTTGAATTTTATTTTCCATCAAAAGAAGATCCACGC
ATAGGAAATTTGTGGATCCAAAATCCATTTCTTTCATCAAAAGATAACTTAAATTTAACT
GTAACTCTACAGGATAAGTTGTTGAAGCTGGCTACCGACGAAGGATTGAAAATCAGTTTT
GAAAATACAGCATCACTTCCTTCATTTTGGATAAAAGCTAAAAATGACTATCCTGAGCTT
GCTGAGATTGCTTTAAAATTGCTGCTTCTTTTCCCCTCAACATACCTCTGTGAGACCGGA
TTCTCTACTTTAAGTGTTATTAAAACAAAACATAGAAACAGTTTAAATATACATTATCCC
CTGAGGGTAGCATTGTCATCAATCCAACCTAGATTAGACAAATTAACAAGCAAGAAGCAA
GCTCACTTATCACAT
Protein sequence predicted based on nucleotide sequence
MEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCY QETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESG EEVVTLLEDLERELDEPRQQVSQGTYGQEVSMEEMIPLDSAKESLGTQLQSMEDRMECES PEPHPLQDNGSFLWFSMMSQSMGGDNLSSLDTNEAEIEPENMREKFFRSLARLLENKSNN TKIFSKAKYCQLIKEVKEAKAKAKKESVDYRRLARFDVILVQGNEKLIEAVNGETDKIRY YLHSEDLFDILHNTHLSIGHGGRTRMEKELQAKYKNITKEVIMLYLTLCKPCQQKNSKLK KVLTSKSIKEVSSRCQVDLIDMQLNPDGEYRFILHYQDLCTKLTFLRSLKSKRPTEVAHA LLDIFTIIGAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAEQTEDIR KRIFSWMQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKLGLSHSQLTEEL VASLHTENELDQADKELENTLRAQYEENIETGTDSSDIEENLSVTPKVAEKSPPESRLRF LSCVVCEKECTGVNSCISCDGNIHAICGVPSQHGTEGCGRQITCSLCYETSTMKRKHDEI QRSLPVKPSKMLKPSGTPFSPDKVGDWMAKQASLDFFVKKRHAFSEHSSSNKRNVNNRSY PEEGKTKRVHASFTRKYDPSYIEFGFVAVIDGEVLKPQCIICGDVLANEAMKPSKLKRHL YSKHKEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIA ETLVKDCIKEVCLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFS LQLDECRDIANMIILLVYVRFEHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGL EFKFCVGVCSDGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLN DIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLV FLQGKKPMWSQLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKL EAWKNRISTDCYDMFHNLTTIINEVGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPR IGNLWIQNPFLSSKDNLNLTVTLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPEL AEIALKLLLLFPSTYLCETGFSTLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKKQ AHLSH
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
End on reference sequence
4596
Start on reference sequence
619
Mutations:
None
Discrepancy:
a433g,T145A; t1085c,V362A;
t1607c,L536P; t1745c,L5
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
kanamycin
Bacterial Selection Condition:
50ug/mL kanamycin
Growth Condition:
Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments:
Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pDONR201
Synonyms:
''
Sequencing Primer:
Forward:
pDONR201-forward
Reverse:
pDONR201-reverse
Description:
Gateway®, donor (entry), recombinational cloning clone, bacterial expression expression with attL1 and attL2 and rrnB T2 and rrnB T1 and attP1 and ccdB and CmR and cat_promoter-var002 and attP2 and KanR and ori; 50ug/mL of Kanamycin resistance in Pichia;
Comments:
The position of features were determined for the unrecombined (empty) form of the vector, which is described in detail on the Invitrogen website.
Size (bp):
4470
Parent Vector:
None
Properties:
Gateway, bacterial expression, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
CDS
ccdB
CcdB, a bacterial toxin that poisons DNA gyrase
959
1264
CDS
CmR
confers resistance to chloramphenicol
1606
2265
CDS
KanR
confers resistance to kanamycin in bacteria or G418 (Geneticin) in eukaryotes
2868
3677
Terminator
rrnB T2
transcription terminator T2 from the E. coli rrnB gene
73
100
Terminator
rrnB T1
transcription terminator T1 from the E. coli rrnB gene
192
278
promoter
cat_promoter-var002
promoter of the E. coli cat gene encoding chloramphenicol acetyltransferase
2266
2368
protein binding site
attP1
recombination site for the Gateway BP reaction
332
563
protein binding site
attP2
recombination site for the Gateway BP reaction
2513
2744
recombination site
attL1
attL recombination site 1 present in recombined (with insert) form only, position is approximate
332
563
recombination site
attL2
attL recombination site 2 present in recombined (with insert) form only, position is approximate
2744
2513
rep_origin
ori
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication
3820
4408
