Gene:
Gene Symbol:
Prpf40a
Gene Name:
PRP40 pre-mRNA processing factor 40 homolog A (yeast)
Original Clone ID:
FLH270276.01L
Keyword:
None
Species:
Mus musculus
Type:
cDNA
Vector Name:
pENTR223.1
Format:
FUSION
Source:
The ORFeome Collaboration
Description:
None
Comments:
None
Mutation / Discrepancy:
No / No
Publications:
None
Authors:
The ORFeome Collaboration
MmCD00083202
Price:
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AVAILABLE
No restriction
Special MTA: None
Special MTA: None
Insert sequence: 2859nts
Open reading frame: 1 to 2859
ATGAGGCCGGGGACTGGAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGGAGAGCCAA
CCTCCCTCGCGGGGTCCCGGGGACGGGGAGCGGAGATTGTCCGGCTCAAACCTGTGCTCC
AGTTCTTGGGTCTCTGCTGACGGCTTCCTGAGGAGACGGCCCTCGATGGGGCATCCTGGC
ATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA
CCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGGGCCTCCAATGGGACAAATG
CCTGGAATGATGTCTTCAGTAATGTCAGGAATGATGATGTCTCATATGTCTCAGGCTTCC
ATGCAACCTGCCTTACCGCCTGGAGTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT
GGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATTATTACAAT
ACTGAAACAAAACAGTCTACCTGGGAAAAGCCAGATGATCTTAAAACACCTGCTGAGCAA
CTATTGTCTAAATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAAGCCTTATTACTAT
AATTCTCAAACAAAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAAGGA
TACCAGAATACCATTGTTGCTGGAGGTCTTATTACAAAATCAAACCTGCATGCCATGATC
AAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT
ACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCTGTT
GTTGCAGCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACTTCCACCACACCTACT
AATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACT
GCTGTAGATAATGAAAATACAGTAACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAAT
ACCACAGCTATTCAAGATCTCAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCT
AAACAAGAAACTGTCTCCGATTTTACTCCTAAAAAAGAAGAGGAAGAGAGCCAACCAGCA
AAAAAAACATATACTTGGAATACAAAGGAGGAGGCAAAGCAAGCATTTAAAGAATTATTG
AAAGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGCAGGCTATGAAAATGATCATAAAT
GATCCTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAAAGCAGGCCTTTAATGCCTAT
AAAGTCCAGACGGAGAAAGAGGAAAAAGAAGAAGCAAGATCAAAATACAAAGAAGCTAAG
GAATCTTTTCAGCGTTTTCTTGAAAATCATGAGAAAATGACTTCCACAACCAGATACAAA
AAAGCTGAGCAAATGTTTGGGGAGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATCGT
CTAGAAATCTATGAAGATGTTTTGTTCTTCCTTTCAAAGAAAGAAAAGGAACAAGCAAAG
CAGCTACGAAAGAGAAATTGGGAAGCCTTAAAAAACATACTTGACAATATGGCTAACGTT
ACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACGTTCGCA
GAGGATGAAGAGTTACAGAACATGGATAAAGAAGATGCATTAATATGCTTTGAGGAACAC
ATCCGGGCTTTAGAAAAGGAAGAAGAAGAAGAAAAACAGAAGACTTTGTTGAGAGAAAGG
AGGAGGCAGCGTAAAAATAGGGAATCTTTTCAGATCTTTCTGGACGAGTTGCACGAGCAT
GGGCAGCTGCACTCTATGTCCTCTTGGATGGAGCTGTATCCCACCATCAGCTCTGACATT
CGCTTCACTAACATGCTGGGTCAGCCGGGATCAACTGCACTTGATCTTTTCAAGTTTTAT
GTTGAAGATCTTAAAGCACGATATCATGATGAAAAGAAGATAATAAAAGACATTCTGAAG
GATAAAGGATTTGTAGTTGAAGTAAACACTACTTTTGAAGATTTTGTGGCAATAATCAGT
TCAACCAAAAGATCAACTACTTTGGATGCTGGAAATATCAAGTTGGCTTTCAATAGTTTA
CTAGAAAAGGCAGAAGCCCGTGAACGTGAGAGAGAAAAAGAAGAGGCTCGGAAAATGAAA
CGGAAAGAGTCTGCCTTTAAGAGTATGTTGAAACAGGCTACCCCTCCAATAGAACTGGAT
GCTGTCTGGGAAGATATCCGGGAAAGATTTGTAAAGGAACCAGCGTTTGAGGATATAACT
CTAGAATCTGAAAGAAAAAGAATATTTAAAGATTTCATGCATGTGCTTGAGCATGAATGT
CAGCATCATCATTCAAAGAACAAGAAACATTCTAAGAAATCTAAAAAGCACCATAGGAAA
CGCTCCCGCTCTCGATCGGGATCAGAGTCAGATGATGACGACAGCCATTCAAAGAAAAAA
AGGCAGCGATCAGAGTCTCATTCTGCTTCAGAGCGTTCGTCCAGTGCTGAGTCTGAGAGA
AGTTACAAGAAGTCAAAAAAGCATAAGAAGAAAAGCAAAAAGAGGAGGCATAAATCTGAC
TCTCCAGAATCAGATACTGAACGAGAAAAGGATAAAAAAGAAAAAGATCGGGACAGTGAA
AAAGACAGAAGTAGACAGAGATCAGAATCAAAACACAAATCACCTAAGAAAAAGACTGGA
AAGGATTCTGGTAACTGGGATACTTCTGGCAGTGAACTGAGTGAAGGGGAATTGGAAAAG
CGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA
Protein sequence predicted based on nucleotide sequence
MRPGTGAERGGLMVSEMESQPPSRGPGDGERRLSGSNLCSSSWVSADGFLRRRPSMGHPG MHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMSGMMMSHMSQAS MQPALPPGVNSMDVAAGAASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGGLITKSNLHAMI KAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAANANTSTTPT NTVGSVPVAPEPEVTSIVATAVDNENTVTVSTEEQAQLANTTAIQDLSGDISSNTGEEPA KQETVSDFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIIN DPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYK KAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANV TYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRER RRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFY VEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSL LEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDIT LESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESDDDDSHSKKK RQRSESHSASERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKEKDRDSE KDRSRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
Coding Sequence Details
Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence
1
End on reference sequence
2862
Mutations:
None
Discrepancy:
None
5' Linker Sequence:
None
3' Linker Sequence:
None
Recommended Growth Condition:
Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:
bacterial
Marker:
spectinomycin
Bacterial Selection Condition:
100 ug/mL spectinomycin
Growth Condition:
Growth at 37 degrees C in LB supplemented with 100 ug/mL spectinomycin.
Comments:
None
Protein Expression Results:
None
Recommended expression in:
Not Applicable
Vector Name:
pENTR223.1
Synonyms:
pDONR-223.1, pENTR223-star-Sfi
Description:
Gateway type (lambda att-type) recombinational cloning entry (master) vector; spectinomycin resistance; recombinational cloning.
Comments:
Additional information about this vector is available from the commercial website and at the ORFeome website http://orfeomecollaboration.org/vectors.php
Size (bp):
4311
Parent Vector:
None
Properties:
Gateway, donor (entry), recombinational cloning
Author Name:
Invitrogen
Publications:
None
Vector Map:
Vector Sequence:
Sequence:
Vector Features:
Type
Name
Description
Start
End
MCS
MCS
MCS (Sfi sites flank the cassette present only in no insert form)
1265
1277
bacterial origin
ori
bacterial origin of replication
1
534
negative selection marker
ccdB
ccdB (no insert form only; lost in with insert form)
1312
1617
primer site
M13 F
M13 forward primer for insert sequencing
1113
1129
primer site
T7
T7 Forward primer for insert sequencing
2902
2921
primer site
M13 reverse
M13 reverse primer for insert sequencing
2926
2942
recombination site
attL1
attL1 recombination site
1165
1264
recombination site
attL2
attL2 recombination site
2786
2885
selectable marker
CmR
chlR (no insert form only; lost in with insert form)
1959
2618
selectable marker
SpnR
spectinomycin resistance gene
3154
4164
