Detailed Plasmid Information

Explanation of Terms

Gene:
Gene Symbol: 
Gene Name: 
Original Clone ID:
39191
Keyword:
None
Species:
Streptococcus mutans UA159
Type:
cDNA
Vector Name:
pSpeedET
Format: 
CLOSED
Source:
Joint Center for Structural Genomics
Description:
None
Comments:
None
Mutation / Discrepancy:
No / Yes
Publications:
None
Authors:
PSI
Joint Center for Structural Genomics
SmCD00087506
Price: 
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AVAILABLE
No restriction
Special MTA: PSI
Insert sequence: 1263nts
Open reading frame: 51 to 1313

CTGATAAAATTCATCATCATCATCATCACGAAAACCTGTACTTCCAGGGCATGGTTAGTA
AATATCATGAAATTTTTTTAAATATTATACAGCAAATCGAAGATGGTCAACTAAAACGCG
GCGATAAACTGCCTTCTATTCGTCAACTGAGCCAAGATTTTCACTGCAGCAAAGATACTG
TTCAAAAAGCTTTGTCAGAATTGAAATATCAAAAATATATTTATCCTATTCTCAAAAGCG
GTTATTACGTTTTTGAGGATAATCATGAAGAAGAAATCCTACCTCCAATCTCTCCTTCTA
ATTACCACAATATTGCTTACGAAGATTTTAGAACCTGCATGAATAAGACTTTAGTTGGGC
GAGAAGATTATCTCTTCAACTACTATCATCAAGAAGAAGGATTGGAAGAGCTGACGCAAT
CTTTACAGGCGCTTTTCGTAGACGAAGCCATTTACAGCAAAAAAGAAAATATCGTTGTCA
CTTCTGGCAGCCAACAAGCCCTTTACATCCTATCACAGATGACCTTTCCCAATCAAAAAG
AGATTATTTTACTGGAACAGCCGACCTACCATCGCATGAACACCTTGGTTAAATCGCAAA
ATCTTCCCTACTTAACTATTGAGCGAGGATTTGATGGACTTGATTTTAATCGACTAGAGG
AGATTTTTAAACAAGAAAAGATTAAGTTCTTTTATACTATTCCGCGTCTATCTAACCCTT
TGGGTTTGTCATACAGTCACAAAGAAAAACAAACTTTGGTAGAATTAGCTCATAAATACG
ATGTCTACATTATTGAAGATGACTATATGGCAGATTTTGACAGAGCCAGCAATGTTTCCT
TACATTACTTAGATACCAACGATAGGATTATTTATTTAAAATCATTTTCTATGTCGCTTT
TTCCTGCTTTACGTTTAGGAAGTTTAATCCTTCCTAAGAAACTCTTGAAAAAATTTCTTG
ATTATAAAAATCTGATTGATTACGATACTAATCTTATCATGCAAAAGGCACTCTCTTTGT
ATATTGATAATGGTATGTTTGCTAAAAATAAGAAACGTCTCAAGCAAATGTATTATCAAA
AAACATCTGAGTTAGCAAAAGAATTTTCAACTTTTACTCTCAAGCTTCCTCATCATATTT
TCCAAGATTCATTAATATTACAATTACCAACTAAAGTCAACCTTGCTCTTTTAAAGTATA
GACTCAATTCACCTAATTTTTTGGAAAAAAATTATATTAATACTTGCCCCTACCACTTTA
TTCAACTGCAAGCAGGAGAAGACCGGCAGAATTTGCTAACTATTTTCGAGTAACGCGACT
TAATTAATTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAG

Protein sequence predicted based on nucleotide sequence

MVSKYHEIFLNIIQQIEDGQLKRGDKLPSIRQLSQDFHCSKDTVQKALSELKYQKYIYPI
LKSGYYVFEDNHEEEILPPISPSNYHNIAYEDFRTCMNKTLVGREDYLFNYYHQEEGLEE
LTQSLQALFVDEAIYSKKENIVVTSGSQQALYILSQMTFPNQKEIILLEQPTYHRMNTLV
KSQNLPYLTIERGFDGLDFNRLEEIFKQEKIKFFYTIPRLSNPLGLSYSHKEKQTLVELA
HKYDVYIIEDDYMADFDRASNVSLHYLDTNDRIIYLKSFSMSLFPALRLGSLILPKKLLK
KFLDYKNLIDYDTNLIMQKALSLYIDNGMFAKNKKRLKQMYYQKTSELAKEFSTFTLKLP
HHIFQDSLILQLPTKVNLALLKYRLNSPNFLEKNYINTCPYHFIQLQAGEDRQNLLTIFE
*

Coding Sequence Details

Insert Sequence Verified?:
Y
Verification Method:
Sequence Verification
Reference Sequence Annotations:
Start on reference sequence 1
End on reference sequence 1263
Mutations:
None
Discrepancy:
g295a,E99K;g312a,R104R;
c990t,F330F;g1161a,S387S;
g1190a,S397N;a1231g,N411D;
t1234c,W412R;
                                                    

5' Linker Sequence:
None
3' Linker Sequence:
None

Recommended Growth Condition:

Distributed in bacterial strain:
DH5-alpha T1 phage resistant
Antibiotic Selection:
Host Type:  bacterial    Marker:  kanamycin
Bacterial Selection Condition: 50ug/mL kanamycin
Growth Condition: Growth with the single antibiotic in LB at 37 degrees is recommended.
Comments: Conditions for Gateway-type vectors in recombined (with insert) form and other kanamycin resistant vectors.
Protein Expression Results:
ProteinExpressed: Not_Applicable
ProteinPurified: Protein_Purified
SolubleProtein: Tested_Not_Soluble
Find experimental protocols in 388352
Recommended expression in:
Not Applicable