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Human Plasmid Collections

90/90 Human ORFeome V 3 (Gateway Entry Vectors) - Complete Collection
90/90 Human ORFeome V 3 (Gateway Entry Vectors) - Membrane Secreted Proteins Subcollection
90/90 Human ORFeome V 3 (Gateway Entry Vectors) - Other Subcollection
90/90 Human ORFeome V 3 (Gateway Entry Vectors) - Transcription Factor Subcollection
BC1000: 1000 human breast cancer-associated genes (pDNR-Dual Gateway Entry Vector, C-terminal tag only)
BC1000: 1000 human breast cancer-associated genes (pDNR-Dual Gateway Entry Vector, untagged only)
BC1000: 1000 human breast cancer-associated genes (pDNR-Dual Gateway Entry Vector; complete set)
Epigenetic Factors and Epigene Histones
Human 3`UTRome v1 collection (Gateway Entry vector)
Human ORFeome V8.1 collection (Gateway Entry vector)
Human expression clone collection (pLDNT7_nFLAG; cell-free expression vector with Flag tag)
Human expression clone collection Complete (pLDNT7_nFLAG, pANT7_cGST; cell-free expression vectors)
Human hORFeome V8.1 Lentiviral collection
Human kinase collection (pDNR-Dual Gateway Entry Vector; complete set)
Human kinase collection (pDNR-Dual Gateway Entry vector; C-terminal tag only)
Human kinase collection (pJP1520 puromycin resistant retroviral vector)
Human kinase collection (pJP1563 blasticidin resistant retroviral vector)


Other Species Plasmid Collections

Arabidopsis thaliana Collection V 1 (Gateway Entry Vectors)
BASIL starter pack V1
FlyBi Drosophila ORFeome vFB5.52
Saccharomyces cerevisiae (yeast) ORF collection (ZM552 expression vector)
Saccharomyces cerevisiae (yeast) ORF collection (pBY011 expression vector)
Saccharomyces cerevisiae (yeast) whole genome ORF collection (pDONR201 or pDONR221 Gateway Entry vectors)
Thermatoga Maritima Plasmid collection (in pMH bacterial expression vectors)
Xenopus ORFeome Collection


Pathogen Genome Collections

Bacillus anthracis whole genome ORF collection (cell-free expression vector)
Bacillus anthracis whole genome ORF collection (pDONR221 Gateway Entry vector)
Francisella tularensis whole genome ORF collection (E. coli expression vector)
Francisella tularensis whole genome ORF collection (pDONR221 Gateway Entry Vector)
Francisella tularensis whole genome ORF collection (yeast expression vector with tags)
Pseudomonas aeruginosa whole genome ORF collection (pDONR201 Gateway Entry vector)
Vaccinia virus ORF collection (cell free expression vector)
Vibrio cholerae ORF collection (cell-free expression vector)
Vibrio cholerae whole genome ORF collection (pDONR221 Gateway Entry vector)
Viral Collection pANT7-cGST V1
Viral Donor Subset
Viral Proteome Collection - pANT7 cGST Expression Vector
Yersinia pestis whole genome ORF collection (pDONR221 vector Gateway Entry Vector)
Yersinia pseudotuberculosis whole genome ORF collection (pDONR221 Gateway Entry vector)

Biological Annotation

Signalling         Nuclear         Extracellular         Other        

Signalling

14_3_3 4.1m ADF ANK ARF
ARM ArfGap B41 B561 BAG
BH4 BIR BTK B_lectin C1
C2 CARD CASc CH CNH
CULLIN CYCc Calx_beta CheW Cyt-b5
DAGKa DAGKc DAX DEATH DED
DEP DSPc DYNc EAL EFh
EH ENTH FBOX FCH FF
FH2 FHA FIST FYVE GAF
GAS2 GED GGDEF GGL GRAM
GS G_alpha GoLoco GuKc HAMP
HATPase_c HECTc HPT HisKA Hr1
ILWEQ IPPc IQ ITAM KISc
L27 LIM LMWPc MA MIR
MYSc MeTrc MyTH4 PAC PAS
PASTA PBD PDZ PH PI3K_C2
PI3K_p85B PI3K_rbd PI3Ka PI3Kc PIPKc
PLAc PLCXc PLCYc PLDc PP2Ac
PP2Cc PTB PTBI PTPc PTPc_motif
PX PXA RA RAB RAN
RAS RBD REC RGS RHO
RHOD RIIa RING RIO RanBD
RasGAP RasGEF RasGEFN RhoGAP RhoGEF
SAM SAR SEC14 SH2 SH3
SOCS SPEC SPRY START STAT_int
S_TK_X S_TKc Sec7 TBC TIR
TRASH TarH TyrKc UBA UBCc
UBQ UBX VHP VHS VPS9
WD40 WH1 WH2 WW ZU5
ZnF_A20 ZnF_AN1 ZnF_RBZ ZnF_UBP ZnF_ZZ
acidPPc cNMP t_SNARE

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Nuclear

35EXOc 53EXOc A1pp ADEAMc ANTAR
AP2 AP2Ec APC2 ARID AT_hook
AWS AXH AlkA_N AraC_E_bind B3
BAF BAH BASIC BBC BBOX
BCL BEN BHD_1 BHD_2 BHD_3
BING4CT BOP1NT BP28CT BRCT BRIGHT
BRK BRLZ BROMO BSD BTP
Bro-N Brr6_like_C_C C1_4 CAT_RBD CBF
CDT1 CENPB CG-1 CHK CHROMO
CKS CPDc CPSF73-100_C CRM1_C CSP
CTD CUT CarD_TRCF Cdc6_C Cir_N
Copper-fist Cu_FIST D5_N DDE_Tnp_IS1595 DDT
DEXDc DM DMAP_binding DP DSHCT
DSRM DSX_dimer DUF1087 DUF1693 DUF1744
DWA DWB DZF ENDO3c ERCC4
ETS EXOIII Elp3 Endonuclease_NS FBD
FCD FES FH FYRC FYRN
Fapy_DNA_glyco Ftsk_gamma Fungal_trans GIYc G_patch
H15 H2A H2B H3 H4
HALZ HDAC_interact HELICc HLH HMG
HMG17 HNHc HNS HOLI HOX
HRDC HSA HSF HTH_ARAC HTH_ARSR
HTH_ASNC HTH_CRP HTH_DEOR HTH_DTXR HTH_GNTR
HTH_ICLR HTH_LACI HTH_LUXR HTH_MARR HTH_MERR
HTH_XRE HhH1 HhH2 IBN_N IENR1
IENR2 IPT IRF IRO JmjC
JmjN KH KOW KRAB Ku78
LEM LIGANc LNS2 LytTR MA3
MADF MADS MBD MBT MCM
MUTSac MUTSd MutH MutL_C NEUZ
NGN NOSIC NurA ORANGE PAX
PAZ PHD POL3Bc POLAc POLBc
POLIIIAc POLXc POP4 POU POX
PRE_C2HC PRY PSP PUA PUG
PUR ParB Piwi Plus3 PostSET
PreSET PriCT_1 Prim-Pol RIBOc RPOL4c
RPOL8c RPOL9 RPOLA_N RPOLCX RPOLD
RPR RQC RRM RWD Resolvase
Rho_N S4 SAND SANT SAP
SCAN SET SFM SMC_hinge SMR
SPK SPT2 SRA STE Skp1
Sm SpoVT_AbrB TAF TBOX TDU
TEA TFIIE TFS2M TFS2N THAP
TIFY TOP1Ac TOP1Bc TOP2c TOP4c
TOPEUc TOPRIM TRCF Telo_bind Telomerase_RBD
Trans_reg_C UDG UME UTRA Ubox
XPGI XPGN YL1_C YccV-like YqgFc
Zalpha ZnF_BED ZnF_C2C2 ZnF_C2H2 ZnF_C2HC
ZnF_C3H1 ZnF_C4 ZnF_CHCC ZnF_DBF ZnF_GATA
ZnF_NFX ZnF_PMZ ZnF_Rad18 ZnF_U1 eIF5C
zf-AD

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Extracellular

A4_EXTRA AAI ACR AIP3 ALBUMIN
AMA-1 AMOP ANATO APPLE A_amylase_inhib
Aamy Aamy_C Aerolysin Agglutinin Amb_V_allergen
Amb_all Ami_2 Ami_3 Asparaginase Autotransporter
BID_1 BID_2 BON BPI1 BPI2
Bet_v_1 BowB C1Q C345C C4
C6 CA CADG CALCITONIN CASH
CBD_II CBD_IV CCP CFEM CHASE
CHASE2 CHRD CLECT CLIP CLa
CLb CNX COLFI COLIPASE CRF
CSF2 CT CUB CW CY
Cache_2 ChW ChtBD1 ChtBD2 ChtBD3
Col_cuticle_N Connexin_CCC Cutinase CysPc DEFSN
DISIN DM4_12 DM6 DNaseIc DSL
DoH EGF EGF_CA EGF_Lam END
EPEND EPH_lbd Excalibur FA58C FAS1
FBG FGF FIMAC FN1 FN2
FN3 FOLN FRI FTP FU
Flu_M1_C G2F GA GASTRIN GEL
GHA GHB GLA GLECT GLUCA
GPS GRAN Galanin Glyco_10 Glyco_18
Glyco_25 Glyco_32 HX HYDRO Haemagg_act
HintC HintN HormR IB IFabd
IG IGc1 IGc2 IGv IL1
IL10 IL2 IL4_13 IL6 IL7
INB IlGF Inhibitor_I29 Int_alpha JHBP
Jacalin KAZAL KR KU Kelch
Knot1 LCCL LDLa LIF_OSM LINK
LPD_N LRRCT LRRNT LRR_BAC LRR_CC
LRR_RI LRR_SD22 LRR_TYP LU LY
LYZ1 LYZ2 LamB LamG LamGL
LamNT LysM MACPF MAM MANEC
MATH MD MHC_II_alpha MHC_II_beta ML
NAT_PEP NEAT NGF NH NIDO
NL NMU NRF NTR NUC
OLF OSTEO P4Hc PA2c PAH
PAN_AP PBP5_C PBPb PBPe PD
PDGF PGA_cap PGRP PKD PLP
PQQ PRP PSA PSI_domain PTH
PTI PTN PTX PbH1 Pept_C1
PhBP RICIN RNAse_Pc SAA SAPA
SCP SCPU SCY SEA SEL1
SERPIN SF_P SH3b SO SR
STI STN SapB Sema ShKT
TECPR TGFB THN TK TNF
TNFR TR_FER TR_THY TSP1 TSPN
TSPc TY Tryp_SPc UTG VIT
VPS10 VWA VWC VWD WAP
WIF WNT1 WR1 WSC X8
XTALbg ZP ZnMc Zn_dep_PLPC Zn_pept
btg1 fCBD s48_45

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Other

AAA AAA_PrkA AARP2CN ACTIN AD
ADSL_C AFOR_N AGTRAP AHS1 AHS2
AICARFT_IMPCHas AIRC AKAP_110 ALAD AMPKBI
AMP_N ANX ASCH Ad_cyc_g-alpha Adenylsucc_synt
AdoHcyase AdoHcyase_NAD Agenet Agouti AgrB
AgrD Agro_virD5 Aha1_N AlaDh_PNT_C AlaDh_PNT_N
Ala_racemase_C AlcB Ald_Xan_dh_C Aldolase_II Alpha-L-AF_C
Alpha-amyl_C2 Alpha-mann_mid Alpha_L_fucos Alpha_TIF Alpha_adaptinC2
Alpha_kinase Amelin Amelogenin Arfaptin Arg_tRNA_synt_N
Arrestin_C B12-binding_2 B2-adapt-app_C B3_4 B5
BACK BAR BATS BCS1_N BHL
BLUF BMC BRICHOS BRO1 BTAD
BTB BURP Bac_DnaA_C Bac_rhodopsin Beach
Beta-Casp Beta-TrCP_D BetaGal_dom2 Bgal_small_N Biotin_carb_C
Brix Btz C8 CAD CAMSAP_CKK
CAP10 CAP_GLY CARP CAT CBM49
CBM_10 CBM_2 CBM_25 CBM_3 CBM_X
CBS CDC37_C CDC37_M CDC37_N CDC48_2
CDC48_N CGGC CHAD CHB_HEX CHZ
CK_II_beta CLH CM_2 COG6 CO_deh_flav_C
CP12 CPSase_L_D3 CPSase_sm_chain CPW_WPC CRA
CRAL_TRIO_N CRISPR_assoc CRS1_YhbY CTLH CTNS
CUE CVNH CXC CYCLIN CYTH
CaMBD CaM_binding Ca_chan_IQ CactinC_cactus Cadherin_pro
Candida_ALS_N Carb_anhydrase Catalase Cation_ATPase_N Cg6151-P
ChSh Citrate_ly_lig ClpB_D2-small CoA_binding CoA_trans
CobW_C Cog4 CorC_HlyC CpcD Cpl-7
Cpn10 Cullin_Nedd8 Cupin_1 CxxC_CXXC_SSSS Cyanate_lyase
D-ser_dehydrat DALR_1 DALR_2 DBC1 DBP10CT
DBR1 DCD DCP2 DCX DDHD
DDRGK DELLA DENN DEXDc2 DHDPS
DHHA2 DIL DIRP DKCLD DM10
DM11 DM13 DM14 DM15 DM16
DM3 DM5 DM7 DM8 DM9
DPBB_1 DRY_EERY DTW DUF1041 DUF1086
DUF1220 DUF1237 DUF1338 DUF1518 DUF167
DUF1704 DUF1713 DUF1716 DUF1719 DUF1741
DUF1751 DUF1767 DUF1771 DUF1785 DUF1856
DUF1866 DUF1899 DUF1900 DUF1907 DUF1943
DUF1944 DUSP Dabb Dak1_2 Dak2
DeoC DeoRC DnaG_DnaB_bind DnaJ Drf_FH3
Drf_GBD DysFC DysFN EB_dh EF1_GNE
EFG_C EFG_IV EKR ELFV_dehydrog ETF
EZ_HEAT Elong-fact-P_C FABD FDX-ACB FMN_bind
FRG Fe_hyd_SSU FeoA Flavin_Reduct Flavokinase
FolB FtsA GAL4 GDNF GIT
GYF GYR Gal-bind_lectin GatB_Yqey Germane
Gp_dh_N Grip HA2 HAT HDc
HELICc2 HEPN HIRAN HTTM HWE_HK
IBR IDEAL IG_FLMN JAB_MPN KIND
L51_S25_CI-B8 LA LH2 LITAF LON
LRRcap Lactamase_B LeuA_dimer Lig_chan-Glu_bd LisH
MGS MIF4G MIT MORN MR_MLE
Mad3_BUB1_I Malic_M MbtH MgtE_N MltA
MoCF_biosynth Molybdop_Fe4S4 Mterf NADH-G_4Fe-4S_3 NADH_4Fe-4S
NDK NEBU NIL NPCBM Nfu_N
OMPdecase OmpH P-II PA14 PAM
PAW PB1 PCRF PGAM PHB
PIG-X PINT PINc PKS_AT PKS_DH
PKS_ER PKS_KR PKS_KS PKS_MT PKS_PP
PKS_TE PLEC PMEI PP2C_SIG PROF
PSN PWI PWWP PYNP_C PepX_C
PepX_N PhnA_Zn_Ribbon PlsC PolyA Prim_Zn_Ribbon
Pro-kuma_activ ProQ ProRS-C_1 Pro_CA Proteasome_A_N
Pumilio QLQ R3H RAP RES
RINGv RL11 RNB RPEL RRM_1
RUN RelA_SpoT Robl_LC7 RuBisCO_small S1
SAF SAM_PNT SATase_N SEC63 SEP
SHR3_chaperone SMI1_KNR4 SNc SOCS_box SRP54
SRP54_N STI1 SWAP SWIB SecA_DEAD
SecA_PP_bind Semialdhyde_dh Sorb Spc7 SpoU_sub_bind
SprT SynN T5orf172 TAFH TAP_C
TGc THEG THUMP THY TLC
TLDc TPK_B1_binding TPR TUDOR TilS_C
Tim44 Transket_pyr Tubulin Tubulin_C UAS
UBA_e1_C UDPG_MGDP_dh_C UIM UreE_C UreE_N
V4R VKc VRR_NUC VWC_out WGR
WHEP-TRS WHy WRKY WSN WWE
YceI ZM ZipA_C ZnF_CDGSH ZnF_TAZ
ZnF_TTF ZnF_UBR1 Zpr1 alkPPc c-SKI_SMAD_bind
calpain_III cwf21 dDENN eIF1a eIF2B_5
eIF6 rADc tRNA_SAD uDENN zf-C4_ClpX

NCI Database         Panther Database         Reactome Database         WikiPathway Database        

NCI Pathways
ALK1 pathway ALK1 signaling events
ALK2 signaling events AP-1 transcription factor network
ATF-2 transcription factor network ATM pathway
ATR signaling pathway Alpha-synuclein signaling
Alpha4 beta1 integrin signaling events Alpha6 beta4 integrin-ligand interactions
Alpha9 beta1 integrin signaling events AlphaE beta7 integrin cell surface interactions
Alternative NF-kappaB pathway Angiopoietin receptor Tie2-mediated signaling
Arf1 pathway Arf6 downstream pathway
Arf6 signaling events Arf6 trafficking events
Atypical NF-kappaB pathway Aurora A signaling
Aurora B signaling Aurora C signaling
BARD1 signaling events BCR signaling pathway
BMP receptor signaling Beta1 integrin cell surface interactions
Beta2 integrin cell surface interactions Beta3 integrin cell surface interactions
Beta5 beta6 beta7 and beta8 integrin cell surface interactions C-MYB transcription factor network
C-MYC pathway CD40/CD40L signaling
CDC42 signaling events CXCR3-mediated signaling events
CXCR4-mediated signaling events Calcineurin-regulated NFAT-dependent transcription in lymphocytes
Calcium signaling in the CD4+ TCR pathway Canonical NF-kappaB pathway
Canonical Wnt signaling pathway Caspase Cascade in Apoptosis
Cellular roles of Anthrax toxin Ceramide signaling pathway
Circadian rhythm pathway Class I PI3K signaling events
Class I PI3K signaling events mediated by Akt Class IB PI3K non-lipid kinase events
Coregulation of Androgen receptor activity DNA-PK pathway in nonhomologous end joining
Degradation of beta catenin Direct p53 effectors
Downstream signaling in naïve CD8+ T cells E-cadherin signaling events
E-cadherin signaling in keratinocytes E-cadherin signaling in the nascent adherens junction
E2F transcription factor network EGF receptor (ErbB1) signaling pathway
EGFR-dependent Endothelin signaling events EPHA forward signaling
EPHA2 forward signaling EPHB forward signaling
EPO signaling pathway Effects of Botulinum toxin
Endogenous TLR signaling Endothelins
Ephrin A reverse signaling Ephrin B reverse signaling
EphrinA-EPHA pathway EphrinB-EPHB pathway
ErbB receptor signaling network ErbB1 downstream signaling
ErbB2/ErbB3 signaling events ErbB4 signaling events
FAS (CD95) signaling pathway FGF signaling pathway
FOXA transcription factor networks FOXA1 transcription factor network
FOXA2 and FOXA3 transcription factor networks FOXM1 transcription factor network
Fanconi anemia pathway Fc-epsilon receptor I signaling in mast cells
FoxO family signaling GMCSF-mediated signaling events
Glucocorticoid receptor regulatory network Glypican 1 network
Glypican 2 network Glypican 3 network
Glypican pathway HIF-1-alpha transcription factor network
HIF-2-alpha transcription factor network HIV-1 Nef: Negative effector of Fas and TNF-alpha
Hedgehog signaling events mediated by Gli proteins Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
IFN-gamma pathway IGF1 pathway
IL1-mediated signaling events IL12 signaling mediated by STAT4
IL12-mediated signaling events IL2 signaling events mediated by PI3K
IL2 signaling events mediated by STAT5 IL2-mediated signaling events
IL23-mediated signaling events IL27-mediated signaling events
IL3-mediated signaling events IL4-mediated signaling events
IL5-mediated signaling events IL6-mediated signaling events
IL8- and CXCR1-mediated signaling events IL8- and CXCR2-mediated signaling events
IL8-mediated signaling events Insulin Pathway
Insulin-mediated glucose transport Integrin family cell surface interactions
Integrin-linked kinase signaling Integrins in angiogenesis
Internalization of ErbB1 JNK signaling in the CD4+ TCR pathway
LKB1 signaling events LPA receptor mediated events
LPA4-mediated signaling events Lissencephaly gene (LIS1) in neuronal migration and development
N-cadherin signaling events Nectin adhesion pathway
Nephrin/Neph1 signaling in the kidney podocyte Netrin-mediated signaling events
Neurotrophic factor-mediated Trk receptor signaling Noncanonical Wnt signaling pathway
Nongenotropic Androgen signaling Notch signaling pathway
Notch-mediated HES/HEY network Osteopontin-mediated events
PAR1-mediated thrombin signaling events PAR4-mediated thrombin signaling events
PDGF receptor signaling network PDGFR-alpha signaling pathway
PDGFR-beta signaling pathway PLK1 signaling events
PLK2 and PLK4 events PLK3 signaling events
Plasma membrane estrogen receptor signaling Plexin-D1 Signaling
Polo-like kinase signaling events in the cell cycle Posttranslational regulation of adherens junction stability and dissassembly
Presenilin action in Notch and Wnt signaling Proteoglycan syndecan-mediated signaling events
RAC1 signaling pathway RXR and RAR heterodimerization with other nuclear receptor
Rapid glucocorticoid signaling Ras signaling in the CD4+ TCR pathway
Reelin signaling pathway Regulation of Androgen receptor activity
Regulation of CDC42 activity Regulation of RAC1 activity
Regulation of Ras family activation Regulation of RhoA activity
Regulation of Telomerase Regulation of cytoplasmic and nuclear SMAD2/3 signaling
Regulation of nuclear SMAD2/3 signaling Regulation of nuclear beta catenin signaling and target gene transcription
Regulation of p38-alpha and p38-beta Regulation of retinoblastoma protein
Retinoic acid receptors-mediated signaling RhoA signaling pathway
Role of Calcineurin-dependent NFAT signaling in lymphocytes S1P1 pathway
S1P2 pathway S1P3 pathway
S1P4 pathway S1P5 pathway
SHP2 signaling Signaling by Aurora kinases
Signaling events mediated by HDAC Class I Signaling events mediated by HDAC Class II
Signaling events mediated by HDAC Class III Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
Signaling events mediated by PRL Signaling events mediated by PTP1B
Signaling events mediated by Stem cell factor receptor (c-Kit) Signaling events mediated by TCPTP
Signaling events mediated by VEGFR1 and VEGFR2 Signaling events mediated by focal adhesion kinase
Signaling events mediated by the Hedgehog family Signaling events regulated by Ret tyrosine kinase
Signaling mediated by p38-alpha and p38-beta Signaling mediated by p38-gamma and p38-delta
Sphingosine 1-phosphate (S1P) pathway Stabilization and expansion of the E-cadherin adherens junction
Sumoylation by RanBP2 regulates transcriptional repression Syndecan-1-mediated signaling events
Syndecan-2-mediated signaling events Syndecan-3-mediated signaling events
Syndecan-4-mediated signaling events TCR signaling in naïve CD4+ T cells
TCR signaling in naïve CD8+ T cells TGF-beta receptor signaling
TNF receptor signaling pathway TRAIL signaling pathway
Thrombin/protease-activated receptor (PAR) pathway Thromboxane A2 receptor signaling
Trk receptor signaling mediated by PI3K and PLC-gamma Trk receptor signaling mediated by the MAPK pathway
Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling VEGF and VEGFR signaling network
VEGFR1 specific signals VEGFR3 signaling in lymphatic endothelium
Validated nuclear estrogen receptor alpha network Validated nuclear estrogen receptor beta network
Validated targets of C-MYC transcriptional activation Validated targets of C-MYC transcriptional repression
Validated transcriptional targets of AP1 family members Fra1 and Fra2 Validated transcriptional targets of TAp63 isoforms
Validated transcriptional targets of deltaNp63 isoforms Visual signal transduction: Cones
Visual signal transduction: Rods Wnt signaling network
a4b7 Integrin signaling a6b1 and a6b4 Integrin signaling
amb2 Integrin signaling mTOR signaling pathway
p38 MAPK signaling pathway p38 signaling mediated by MAPKAP kinases
p53 pathway p73 transcription factor network
p75(NTR)-mediated signaling
Panther Pathways

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2-arachidonoylglycerol biosynthesis
5-Hydroxytryptamine biosynthesis 5-Hydroxytryptamine degredation
5HT1 type receptor mediated signaling pathway 5HT2 type receptor mediated signaling pathway
5HT3 type receptor mediated signaling pathway 5HT4 type receptor mediated signaling pathway
ATP synthesis Acetate utilization
Adenine and hypoxanthine salvage pathway Adrenaline and noradrenaline biosynthesis
Alanine biosynthesis Alpha adrenergic receptor signaling pathway
Alzheimer disease-amyloid secretase pathway Alzheimer disease-presenilin pathway
Aminobutyrate degradation Anandamide degradation
Androgen/estrogene/progesterone biosynthesis Angiogenesis
Angiotensin II-stimulated signaling through G proteins and beta-arrestin Apoptosis signaling pathway
Arginine biosynthesis Ascorbate degradation
Asparagine and aspartate biosynthesis Axon guidance mediated by Slit/Robo
Axon guidance mediated by netrin Axon guidance mediated by semaphorins
B cell activation Beta1 adrenergic receptor signaling pathway
Beta2 adrenergic receptor signaling pathway Beta3 adrenergic receptor signaling pathway
Blood coagulation Bupropion degradation
Cadherin signaling pathway Carnitine metabolism
Cell cycle Cholesterol biosynthesis
Circadian clock system Coenzyme A biosynthesis
Coenzyme A linked carnitine metabolism Cortocotropin releasing factor receptor signaling pathway
Cysteine biosynthesis Cytoskeletal regulation by Rho GTPase
DNA replication De novo purine biosynthesis
De novo pyrimidine deoxyribonucleotide biosynthesis De novo pyrimidine ribonucleotides biosythesis
Dopamine receptor mediated signaling pathway EGF receptor signaling pathway
Endogenous cannabinoid signaling Endothelin signaling pathway
Enkephalin release FAS signaling pathway
FGF signaling pathway Flavin biosynthesis
Formyltetrahydroformate biosynthesis Fructose galactose metabolism
GABA-B receptor II signaling Gamma-aminobutyric acid synthesis
General transcription by RNA polymerase I General transcription regulation
Glutamine glutamate conversion Glycolysis
Gonadotropin-releasing hormone receptor pathway Hedgehog signaling pathway
Heme biosynthesis Heterotrimeric G-protein signaling pathway-Gi alpha and Gs alpha mediated pathway
Heterotrimeric G-protein signaling pathway-Gq alpha and Go alpha mediated pathway Heterotrimeric G-protein signaling pathway-rod outer segment phototransduction
Histamine H1 receptor mediated signaling pathway Histamine H2 receptor mediated signaling pathway
Histamine synthesis Huntington disease
Hypoxia response via HIF activation Inflammation mediated by chemokine and cytokine signaling pathway
Insulin/IGF pathway-mitogen activated protein kinase kinase/MAP kinase cascade Insulin/IGF pathway-protein kinase B signaling cascade
Integrin signalling pathway Interferon-gamma signaling pathway
Interleukin signaling pathway Ionotropic glutamate receptor pathway
Isoleucine biosynthesis JAK/STAT signaling pathway
Leucine biosynthesis Lipoate_biosynthesis
Mannose metabolism Metabotropic glutamate receptor group I pathway
Metabotropic glutamate receptor group II pathway Metabotropic glutamate receptor group III pathway
Methionine biosynthesis Methylcitrate cycle
Methylmalonyl pathway Muscarinic acetylcholine receptor 1 and 3 signaling pathway
Muscarinic acetylcholine receptor 2 and 4 signaling pathway N-acetylglucosamine metabolism
Nicotine degradation Nicotine pharmacodynamics pathway
Nicotinic acetylcholine receptor signaling pathway Notch signaling pathway
O-antigen biosynthesis Opioid prodynorphin pathway
Opioid proenkephalin pathway Opioid proopiomelanocortin pathway
Ornithine degradation Oxidative stress response
Oxytocin receptor mediated signaling pathway P53 pathway feedback loops 1
PDGF signaling pathway PI3 kinase pathway
Parkinson disease Pentose phosphate pathway
Phenylethylamine degradation Plasminogen activating cascade
Proline biosynthesis Purine metabolism
Pyridoxal phosphate salvage pathway Pyridoxal-5-phosphate biosynthesis
Pyrimidine Metabolism Pyruvate metabolism
Ras Pathway S-adenosylmethionine biosynthesis
Salvage pyrimidine deoxyribonucleotides Salvage pyrimidine ribonucleotides
Serine glycine biosynthesis Succinate to proprionate conversion
Sulfate assimilation Synaptic vesicle trafficking
T cell activation TCA cycle
TGF-beta signaling pathway Tetrahydrofolate biosynthesis
Thiamin metabolism Threonine biosynthesis
Thyrotropin-releasing hormone receptor signaling pathway Toll receptor signaling pathway
Transcription regulation by bZIP transcription factor Triacylglycerol metabolism
Ubiquitin proteasome pathway VEGF signaling pathway
Valine biosynthesis Vasopressin synthesis
Vitamin B6 metabolism Vitamin D metabolism and pathway
Wnt signaling pathway Xanthine and guanine salvage pathway
mRNA splicing p38 MAPK pathway
p53 pathway p53 pathway by glucose deprivation
p53 pathway feedback loops 2
Reactome Pathways

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2-LTR circle formation
3' -UTR-mediated translational regulation 5-Phosphoribose 1-diphosphate biosynthesis
A tetrasaccharide linker sequence is required for GAG synthesis A third proteolytic cleavage releases NICD
ABC-family proteins mediated transport ABCA transporters in lipid homeostasis
ABH2 mediated Reversal of Alkylation Damage ABH3 mediated Reversal of Alkylation Damage
ADP signalling through P2Y purinoceptor 1 ADP signalling through P2Y purinoceptor 12
AKT phosphorylates targets in the cytosol AKT phosphorylates targets in the nucleus
AKT-mediated inactivation of FOXO1A AMPK inhibits chREBP transcriptional activation activity
APC-Cdc20 mediated degradation of Nek2A APC/C-mediated degradation of cell cycle proteins
APC/C:Cdc20 mediated degradation of Cyclin B APC/C:Cdc20 mediated degradation of Securin
APC/C:Cdc20 mediated degradation of mitotic proteins APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
APOBEC3G mediated resistance to HIV-1 infection ARMS-mediated activation
ATF4 activates genes ATF6-alpha activates chaperone genes
ATF6-alpha activates chaperones ATM mediated phosphorylation of repair proteins
ATM mediated response to DNA double-strand break ATP sensitive Potassium channels
AUF1 (hnRNP D0) destabilizes mRNA Abacavir metabolism
Abacavir transmembrane transport Abacavir transport and metabolism
Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate Abnormal metabolism in phenylketonuria
Abortive elongation of HIV-1 transcript in the absence of Tat Acetylation
Acetylcholine Binding And Downstream Events Acetylcholine Neurotransmitter Release Cycle
Acetylcholine regulates insulin secretion Acrosome Reaction
Activated NOTCH1 Transmits Signal to the Nucleus Activated TLR4 signalling
Activated point mutants of FGFR2 Activation and oligomerization of BAK protein
Activation of AMPA receptors Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins
Activation of ATR in response to replication stress Activation of BAD and translocation to mitochondria
Activation of BH3-only proteins Activation of BIM and translocation to mitochondria
Activation of BMF and translocation to mitochondria Activation of C3 and C5
Activation of Ca-permeable Kainate Receptor Activation of CaMK IV
Activation of DNA fragmentation factor Activation of G protein gated Potassium channels
Activation of GABAB receptors Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon
Activation of Kainate Receptors upon glutamate binding Activation of Matrix Metalloproteinases
Activation of NF-kappaB in B cells Activation of NIMA Kinases NEK9, NEK6, NEK7
Activation of NMDA receptor upon glutamate binding and postsynaptic events Activation of NOXA and translocation to mitochondria
Activation of Na-permeable Kainate Receptors Activation of Nicotinic Acetylcholine Receptors
Activation of PKB Activation of PPARGC1A (PGC-1alpha) by phosphorylation
Activation of PUMA and translocation to mitochondria Activation of RAS in B cells
Activation of Rac Activation of TRKA receptors
Activation of caspases through apoptosome-mediated cleavage Activation of gene expression by SREBF (SREBP)
Activation of the AP-1 family of transcription factors Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
Activation of the phototransduction cascade Activation of the pre-replicative complex
Activation, myristolyation of BID and translocation to mitochondria Activation, translocation and oligomerization of BAX
Acyl chain remodeling of CL Acyl chain remodeling of DAG and TAG
Acyl chain remodelling of PC Acyl chain remodelling of PE
Acyl chain remodelling of PG Acyl chain remodelling of PI
Acyl chain remodelling of PS Adaptive Immune System
Adenosine P1 receptors Adenylate cyclase activating pathway
Adenylate cyclase inhibitory pathway Adherens junctions interactions
Adrenaline signalling through Alpha-2 adrenergic receptor Adrenaline,noradrenaline inhibits insulin secretion
Adrenoceptors Advanced glycosylation endproduct receptor signaling
Agmatine biosynthesis Alpha-defensins
Alpha-oxidation of phytanate Alternative complement activation
Amine Oxidase reactions Amine compound SLC transporters
Amine ligand-binding receptors Amine-derived hormones
Amino Acid conjugation Amino acid and oligopeptide SLC transporters
Amino acid synthesis and interconversion (transamination) Amino acid transport across the plasma membrane
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal Amplification of signal from the kinetochores
Amyloids Anchoring fibril formation
Androgen biosynthesis Antagonism of Activin by Follistatin
Antigen Presentation: Folding, assembly and peptide loading of class I MHC Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
Antigen processing-Cross presentation Antigen processing: Ubiquitination & Proteasome degradation
Antiviral mechanism by IFN-stimulated genes Apoptosis
Apoptosis induced DNA fragmentation Apoptotic cleavage of cell adhesion proteins
Apoptotic cleavage of cellular proteins Apoptotic execution phase
Apoptotic factor-mediated response Aquaporin-mediated transport
Arachidonate production from DAG Arachidonic acid metabolism
Aromatic amines can be N-hydroxylated or N-dealkylated by CYP1A2 Asparagine N-linked glycosylation
Assembly Of The HIV Virion Assembly of Viral Components at the Budding Site
Assembly of collagen fibrils and other multimeric structures Assembly of the ORC complex at the origin of replication
Assembly of the RAD50-MRE11-NBS1 complex at DNA double-strand breaks Assembly of the RAD51-ssDNA nucleoprotein complex
Assembly of the pre-replicative complex Association of TriC/CCT with target proteins during biosynthesis
Association of licensing factors with the pre-replicative complex Astrocytic Glutamate-Glutamine Uptake And Metabolism
Asymmetric localization of PCP proteins Attachment of GPI anchor to uPAR
Attenuation phase Autodegradation of Cdh1 by Cdh1:APC/C
Autodegradation of the E3 ubiquitin ligase COP1 Autointegration results in viral DNA circles
Axon guidance Axonal growth inhibition (RHOA activation)
Axonal growth stimulation BH3-only proteins associate with and inactivate anti-apoptotic BCL-2 members
BMAL1:CLOCK,NPAS2 activates circadian gene expression Base Excision Repair
Base-Excision Repair, AP Site Formation Base-free sugar-phosphate removal via the single-nucleotide replacement pathway
Basigin interactions Beta defensins
Beta oxidation of butanoyl-CoA to acetyl-CoA Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Beta oxidation of hexanoyl-CoA to butanoyl-CoA Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA
Beta oxidation of myristoyl-CoA to lauroyl-CoA Beta oxidation of octanoyl-CoA to hexanoyl-CoA
Beta oxidation of palmitoyl-CoA to myristoyl-CoA Beta-catenin phosphorylation cascade
Beta-oxidation of pristanoyl-CoA Beta-oxidation of very long chain fatty acids
Bicarbonate transporters Bile acid and bile salt metabolism
Bile salt and organic anion SLC transporters Binding and Uptake of Ligands by Scavenger Receptors
Binding and entry of HIV virion Biological oxidations
Biosynthesis of A2E, implicated in retinal degradation Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Biotin transport and metabolism Branched-chain amino acid catabolism
Breakdown of the nuclear lamina Budding and maturation of HIV virion
Butyrate Response Factor 1 (BRF1) destabilizes mRNA C6 deamination of adenosine
CD28 co-stimulation CD28 dependent PI3K/Akt signaling
CD28 dependent Vav1 pathway CDC6 association with the ORC:origin complex
CDK-mediated phosphorylation and removal of Cdc6 CDO in myogenesis
CDT1 association with the CDC6:ORC:origin complex CHL1 interactions
COPI Mediated Transport COPII (Coat Protein 2) Mediated Vesicle Transport
COX reactions CREB phosphorylation
CREB phosphorylation through the activation of Adenylate Cyclase CREB phosphorylation through the activation of CaMKII
CREB phosphorylation through the activation of CaMKK CREB phosphorylation through the activation of Ras
CRMPs in Sema3A signaling CS/DS degradation
CTLA4 inhibitory signaling CYP2E1 reactions
Ca-dependent events Ca2+ activated K+ channels
Ca2+ pathway CaM pathway
CaMK IV-mediated phosphorylation of CREB Calcitonin-like ligand receptors
Calmodulin induced events Calnexin/calreticulin cycle
Cam-PDE 1 activation Cap-dependent Translation Initiation
Carnitine synthesis Caspase-8 activation
Caspase-mediated cleavage of cytoskeletal proteins Catecholamine biosynthesis
Cation-coupled Chloride cotransporters Cdc20:Phospho-APC/C mediated degradation of Cyclin A
Cell Cycle Cell Cycle Checkpoints
Cell Cycle, Mitotic Cell death signalling via NRAGE, NRIF and NADE
Cell junction organization Cell surface interactions at the vascular wall
Cell-Cell communication Cell-cell junction organization
Cell-extracellular matrix interactions Cellular Senescence
Cellular response to heat stress Cellular response to hypoxia
Cellular responses to stress Centrosome maturation
Ceramide signalling ChREBP activates metabolic gene expression
Chaperonin-mediated protein folding Chemokine receptors bind chemokines
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex Cholesterol biosynthesis
Chondroitin sulfate biosynthesis Chondroitin sulfate/dermatan sulfate metabolism
Chromatin modifying enzymes Chromatin organization
Chromosome Maintenance Chylomicron-mediated lipid transport
Circadian Clock Citric acid cycle (TCA cycle)
Class A/1 (Rhodopsin-like receptors) Class B/2 (Secretin family receptors)
Class C/3 (Metabotropic glutamate/pheromone receptors) Class I MHC mediated antigen processing & presentation
Class II GLUTs Classical Kir channels
Classical antibody-mediated complement activation Clathrin derived vesicle budding
Clearance of Nuclear Envelope Membranes from Chromatin Cleavage of Growing Transcript in the Termination Region
Cleavage of the damaged purine Cleavage of the damaged pyrimidine
Cobalamin (Cbl, vitamin B12) transport and metabolism Coenzyme A biosynthesis
Cohesin Loading onto Chromatin Collagen biosynthesis and modifying enzymes
Collagen degradation Collagen formation
Common Pathway Complement cascade
Condensation of Prometaphase Chromosomes Condensation of Prophase Chromosomes
Conjugation of benzoate with glycine Conjugation of carboxylic acids
Conjugation of phenylacetate with glutamine Conjugation of salicylate with glycine
Constitutive PI3K/AKT Signaling in Cancer Constitutive Signaling by NOTCH1 HD Domain Mutants
Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants Constitutive Signaling by NOTCH1 PEST Domain Mutants
Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding Costimulation by the CD28 family
Creatine metabolism Creation of C4 and C2 activators
Cross-presentation of particulate exogenous antigens (phagosomes) Cross-presentation of soluble exogenous antigens (endosomes)
Crosslinking of collagen fibrils Cyclin A/B1 associated events during G2/M transition
Cyclin A:Cdk2-associated events at S phase entry Cyclin B2 mediated events
Cyclin D associated events in G1 Cyclin E associated events during G1/S transition
Cysteine formation from homocysteine Cytochrome P450 - arranged by substrate type
Cytochrome c-mediated apoptotic response Cytokine Signaling in Immune system
Cytosolic iron-sulfur cluster assembly Cytosolic sensors of pathogen-associated DNA
Cytosolic sulfonation of small molecules Cytosolic tRNA aminoacylation
DAG and IP3 signaling DAP12 interactions
DAP12 signaling DARPP-32 events
DCC mediated attractive signaling DEx/H-box helicases activate type I IFN and inflammatory cytokines production
DNA Damage Bypass DNA Damage Recognition in GG-NER
DNA Damage Reversal DNA Damage/Telomere Stress Induced Senescence
DNA Repair DNA Replication
DNA Replication Pre-Initiation DNA replication initiation
DNA strand elongation DSCAM interactions
Deadenylation of mRNA Deadenylation-dependent mRNA decay
Death Receptor Signalling Defective AMN causes hereditary megaloblastic anemia 1
Defective BTD causes biotidinase deficiency Defective CD320 causes methylmalonic aciduria
Defective CUBN causes hereditary megaloblastic anemia 1 Defective GIF causes intrinsic factor deficiency
Defective HLCS causes multiple carboxylase deficiency Defective LMBRD1 causes methylmalonic aciduria and homocystinuria type cblF
Defective MMAA causes methylmalonic aciduria type cblA Defective MMAB causes methylmalonic aciduria type cblB
Defective MMACHC causes methylmalonic aciduria and homocystinuria type cblC Defective MMADHC causes methylmalonic aciduria and homocystinuria type cblD
Defective MTR causes methylmalonic aciduria and homocystinuria type cblG Defective MTRR causes methylmalonic aciduria and homocystinuria type cblE
Defective MUT causes methylmalonic aciduria mut type Defective TCN2 causes hereditary megaloblastic anemia
Defects in biotin (Btn) metabolism Defects in cobalamin (B12) metabolism
Defects in vitamin and cofactor metabolism Defensins
Degradation of GABA Degradation of beta-catenin by the destruction complex
Degradation of cysteine and homocysteine Degradation of the extracellular matrix
Depolarization of the Presynaptic Terminal Triggers the Opening of Calcium Channels Depolymerisation of the Nuclear Lamina
Deposition of new CENPA-containing nucleosomes at the centromere Depurination
Depyrimidination Dermatan sulfate biosynthesis
Detoxification of Reactive Oxygen Species Developmental Biology
Digestion of dietary carbohydrate Digestion of dietary lipid
Dimerization of procaspase-8 Disease
Diseases associated with visual transduction Disinhibition of SNARE formation
Displacement of DNA glycosylase by APE1 Dissolution of Fibrin Clot
Dopamine Neurotransmitter Release Cycle Dopamine clearance from the synaptic cleft
Dopamine receptors Double-Strand Break Repair
Downregulation of ERBB2:ERBB3 signaling Downregulation of ERBB4 signaling
Downregulation of SMAD2/3:SMAD4 transcriptional activity Downregulation of TGF-beta receptor signaling
Downstream TCR signaling Downstream signal transduction
Downstream signaling events of B Cell Receptor (BCR) Downstream signaling of activated FGFR
Dual incision reaction in GG-NER Dual incision reaction in TC-NER
E2F mediated regulation of DNA replication E2F-enabled inhibition of pre-replication complex formation
ECM proteoglycans EGFR Transactivation by Gastrin
EGFR downregulation EGFR interacts with phospholipase C-gamma
ER Quality Control Compartment (ERQC) ER to Golgi Transport
ER-Phagosome pathway ERK activation
ERK/MAPK targets ERK1 activation
ERK2 activation ERKs are inactivated
Early Phase of HIV Life Cycle Effects of PIP2 hydrolysis
Eicosanoid ligand-binding receptors Eicosanoids
Elastic fibre formation Electric Transmission Across Gap Junctions
Electron transport from NADPH to Ferredoxin Elevation of cytosolic Ca2+ levels
Elongation arrest and recovery Endogenous sterols
Endosomal Sorting Complex Required For Transport (ESCRT) Endosomal/Vacuolar pathway
Energy dependent regulation of mTOR by LKB1-AMPK Entry of Influenza Virion into Host Cell via Endocytosis
Enzymatic degradation of Dopamine by monoamine oxidase Enzymatic degradation of dopamine by COMT
Epigenetic regulation of gene expression Erythrocytes take up carbon dioxide and release oxygen
Erythrocytes take up oxygen and release carbon dioxide Establishment of Sister Chromatid Cohesion
Estrogen biosynthesis Ethanol oxidation
Eukaryotic Translation Elongation Eukaryotic Translation Initiation
Eukaryotic Translation Termination Export of Viral Ribonucleoproteins from Nucleus
Extension of Telomeres Extracellular matrix organization
Extrinsic Pathway Extrinsic Pathway for Apoptosis
FBXW7 Mutants and NOTCH1 in Cancer FCERI mediated Ca+2 mobilization
FCERI mediated MAPK activation FCERI mediated NF-kB activation
FCGR activation FGFR ligand binding and activation
FGFR1 ligand binding and activation FGFR1b ligand binding and activation
FGFR1c and Klotho ligand binding and activation FGFR1c ligand binding and activation
FGFR2 ligand binding and activation FGFR2b ligand binding and activation
FGFR2c ligand binding and activation FGFR3 ligand binding and activation
FGFR3b ligand binding and activation FGFR3c ligand binding and activation
FGFR4 ligand binding and activation FMO oxidizes nucleophiles
FRS2-mediated cascade Facilitative Na+-independent glucose transporters
Factors involved in megakaryocyte development and platelet production Fanconi Anemia pathway
FasL/ CD95L signaling Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion
Fatty Acyl-CoA Biosynthesis Fatty acid, triacylglycerol, and ketone body metabolism
Fatty acids Fc epsilon receptor (FCERI) signaling
Fcgamma receptor (FCGR) dependent phagocytosis Fertilization
Fibronectin matrix formation Ficolins bind to repetitive carbohydrate structures on the target cell surface
Folding of actin by CCT/TriC Formation of ATP by chemiosmotic coupling
Formation of Fibrin Clot (Clotting Cascade) Formation of HIV elongation complex in the absence of HIV Tat
Formation of HIV-1 elongation complex containing HIV-1 Tat Formation of RNA Pol II elongation complex
Formation of Senescence-Associated Heterochromatin Foci (SAHF) Formation of a pool of free 40S subunits
Formation of annular gap junctions Formation of apoptosome
Formation of editosomes by ADAR proteins Formation of incision complex in GG-NER
Formation of the Early Elongation Complex Formation of the Editosome
Formation of the HIV-1 Early Elongation Complex Formation of the active cofactor, UDP-glucuronate
Formation of the ternary complex, and subsequently, the 43S complex Formation of transcription-coupled NER (TC-NER) repair complex
Formation of tubulin folding intermediates by CCT/TriC Formyl peptide receptors bind formyl peptides and many other ligands
Free fatty acid receptors Free fatty acids regulate insulin secretion
Frs2-mediated activation Fructose catabolism
G alpha (12/13) signalling events G alpha (i) signalling events
G alpha (q) signalling events G alpha (s) signalling events
G alpha (z) signalling events G beta:gamma signalling through PI3Kgamma
G beta:gamma signalling through PLC beta G protein gated Potassium channels
G-protein activation G-protein beta:gamma signalling
G-protein mediated events G0 and Early G1
G1 Phase G1/S DNA Damage Checkpoints
G1/S Transition G1/S-Specific Transcription
G2 Phase G2/M Checkpoints
G2/M DNA damage checkpoint G2/M DNA replication checkpoint
G2/M Transition GAB1 signalosome
GABA A (rho) receptor activation GABA A receptor activation
GABA B receptor activation GABA receptor activation
GABA synthesis GABA synthesis, release, reuptake and degradation
GP1b-IX-V activation signalling GPCR downstream signaling
GPCR ligand binding GPVI-mediated activation cascade
GRB2 events in EGFR signaling GRB2 events in ERBB2 signaling
GRB2:SOS provides linkage to MAPK signaling for Integrins GRB7 events in ERBB2 signaling
GTP hydrolysis and joining of the 60S ribosomal subunit Galactose catabolism
Gamma-carboxylation of protein precursors Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
Gap junction assembly Gap junction degradation
Gap junction trafficking Gap junction trafficking and regulation
Gap-filling DNA repair synthesis and ligation in GG-NER Gap-filling DNA repair synthesis and ligation in TC-NER
Gastrin-CREB signalling pathway via PKC and MAPK Gene Expression
Generation of second messenger molecules Generic Transcription Pathway
Global Genomic NER (GG-NER) Glucagon signaling in metabolic regulation
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion Glucagon-type ligand receptors
Glucocorticoid biosynthesis Gluconeogenesis
Glucose metabolism Glucose transport
Glucuronidation Glutamate Binding, Activation of AMPA Receptors and Synaptic Plasticity
Glutamate Neurotransmitter Release Cycle Glutathione conjugation
Glutathione synthesis and recycling Glycerophospholipid biosynthesis
Glycogen breakdown (glycogenolysis) Glycogen storage diseases
Glycogen synthesis Glycolysis
Glycoprotein hormones Glycosaminoglycan metabolism
Glycosphingolipid metabolism Glyoxylate metabolism
Golgi Associated Vesicle Biogenesis Golgi Cisternae Pericentriolar Stack Reorganization
Golgi to ER Retrograde Transport Growth hormone receptor signaling
HATs acetylate histones HCN channels
HDL-mediated lipid transport HIV Infection
HIV Life Cycle HIV Transcription Elongation
HIV Transcription Initiation HIV elongation arrest and recovery
HS-GAG biosynthesis HS-GAG degradation
HSF1 activation HSF1-dependent transactivation
Heme biosynthesis Heme degradation
Hemostasis Heparan sulfate/heparin (HS-GAG) metabolism
Hexose transport Highly calcium permeable nicotinic acetylcholine receptors
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors Highly sodium permeable acetylcholine nicotinic receptors
Histamine receptors Histidine catabolism
Homologous DNA pairing and strand exchange Homologous Recombination Repair
Homologous recombination repair of replication-independent double-strand breaks Hormone ligand-binding receptors
Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis Host Interactions of HIV factors
Host Interactions with Influenza Factors HuR stabilizes mRNA
Hyaluronan biosynthesis and export Hyaluronan metabolism
Hyaluronan uptake and degradation Hydrolysis of LPC
Hydrolysis of LPE Hydroxycarboxylic acid-binding receptors
Hypusine synthesis from eIF5A-lysine IGF1R signaling cascade
IKK complex recruitment mediated by RIP1 IRAK1 recruits IKK complex
IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation IRAK2 mediated activation of TAK1 complex
IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation IRE1alpha activates chaperones
IRF3 mediated activation of type 1 IFN IRF3-mediated induction of type I IFN
IRS activation IRS-mediated signalling
IRS-related events IRS-related events triggered by IGF1R
ISG15 antiviral mechanism Immune System
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell Import of palmitoyl-CoA into the mitochondrial matrix
Inactivation of APC/C via direct inhibition of the APC/C complex Inactivation of Cdc42 and Rac
Inactivation, recovery and regulation of the phototransduction cascade Incretin synthesis, secretion, and inactivation
Inflammasomes Influenza Infection
Influenza Life Cycle Influenza Viral RNA Transcription and Replication
Influenza Virus Induced Apoptosis Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
Inhibition of HSL Inhibition of Host mRNA Processing and RNA Silencing
Inhibition of PKR Inhibition of TSC complex formation by PKB
Inhibition of adenylate cyclase pathway Inhibition of replication initiation of damaged DNA by RB1/E2F1
Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components Initial triggering of complement
Initiation of Nuclear Envelope Reformation Innate Immune System
Inositol phosphate metabolism Inositol transporters
Insulin effects increased synthesis of Xylulose-5-Phosphate Insulin processing
Insulin receptor recycling Insulin receptor signalling cascade
Insulin-like Growth Factor-2 mRNA Binding Proteins (IGF2BPs/IMPs/VICKZs) bind RNA Integration of energy metabolism
Integration of provirus Integration of viral DNA into host genomic DNA
Integrin alphaIIb beta3 signaling Integrin cell surface interactions
Interaction With Cumulus Cells Interaction With The Zona Pellucida
Interaction between L1 and Ankyrins Interactions of Rev with host cellular proteins
Interactions of Tat with host cellular proteins Interactions of Vpr with host cellular proteins
Interconversion of 2-oxoglutarate and 2-hydroxyglutarate Interconversion of polyamines
Interferon Signaling Interferon alpha/beta signaling
Interferon gamma signaling Interleukin receptor SHC signaling
Interleukin-1 processing Interleukin-1 signaling
Interleukin-2 signaling Interleukin-3, 5 and GM-CSF signaling
Interleukin-6 signaling Interleukin-7 signaling
Intrinsic Pathway Intrinsic Pathway for Apoptosis
Inwardly rectifying K+ channels Ion channel transport
Ion transport by P-type ATPases Ionotropic activity of Kainate Receptors
Iron uptake and transport JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
KSRP destabilizes mRNA Keratan sulfate biosynthesis
Keratan sulfate degradation Keratan sulfate/keratin metabolism
Ketone body metabolism Kinesins
Klotho-mediated ligand binding L13a-mediated translational silencing of Ceruloplasmin expression
L1CAM interactions LDL-mediated lipid transport
LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production Lagging Strand Synthesis
Laminin interactions Late Phase of HIV Life Cycle
Latent infection of Homo sapiens with Mycobacterium tuberculosis Leading Strand Synthesis
Lectin pathway of complement activation Leukotriene receptors
Ligand-gated ion channel transport Linoleic acid (LA) metabolism
Lipid digestion, mobilization, and transport Lipoprotein metabolism
Localization of the PINCH-ILK-PARVIN complex to focal adhesions Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling
Loss of Function of SMAD2/3 in Cancer Loss of Function of SMAD4 in Cancer
Loss of Function of TGFBR1 in Cancer Loss of Function of TGFBR2 in Cancer
Loss of Nlp from mitotic centrosomes Loss of proteins required for interphase microtubule organizationÿ from the centrosome
Lysine catabolism Lysosome Vesicle Biogenesis
Lysosphingolipid and LPA receptors M Phase
M/G1 Transition MAP kinase activation in TLR cascade
MAPK targets/ Nuclear events mediated by MAP kinases MASTL Facilitates Mitotic Progression
MEK activation MHC class II antigen presentation
MPS I - Hurler syndrome MPS II - Hunter syndrome
MPS IIIA - Sanfilippo syndrome A MPS IIIB - Sanfilippo syndrome B
MPS IIIC - Sanfilippo syndrome C MPS IIID - Sanfilippo syndrome D
MPS IV - Morquio syndrome A MPS IV - Morquio syndrome B
MPS IX - Natowicz syndrome MPS VI - Maroteaux-Lamy syndrome
MPS VII - Sly syndrome MRN complex relocalizes to nuclear foci
Meiosis Meiotic recombination
Meiotic synapsis Membrane Trafficking
Membrane binding and targetting of GAG proteins Metabolism
Metabolism of Angiotensinogen to Angiotensins Metabolism of RNA
Metabolism of amino acids and derivatives Metabolism of carbohydrates
Metabolism of folate and pterines Metabolism of lipids and lipoproteins
Metabolism of mRNA Metabolism of nitric oxide
Metabolism of non-coding RNA Metabolism of nucleotides
Metabolism of polyamines Metabolism of porphyrins
Metabolism of proteins Metabolism of serotonin
Metabolism of steroid hormones and vitamin D Metabolism of vitamins and cofactors
Metabolism of water-soluble vitamins and cofactors Metal ion SLC transporters
Methionine salvage pathway Methylation
MicroRNA (miRNA) biogenesis Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane
Mineralocorticoid biosynthesis Minus-strand DNA synthesis
Miscellaneous substrates Mitochondrial ABC transporters
Mitochondrial Fatty Acid Beta-Oxidation Mitochondrial Uncoupling Proteins
Mitochondrial biogenesis Mitochondrial iron-sulfur cluster biogenesis
Mitochondrial protein import Mitochondrial tRNA aminoacylation
Mitochondrial transcription initiation Mitochondrial transcription termination
Mitotic Anaphase Mitotic G1-G1/S phases
Mitotic G2-G2/M phases Mitotic M-M/G1 phases
Mitotic Metaphase and Anaphase Mitotic Metaphase/Anaphase Transition
Mitotic Prometaphase Mitotic Prophase
Mitotic Spindle Checkpoint Mitotic Telophase/Cytokinesis
Molecules associated with elastic fibres Molybdenum cofactor biosynthesis
Monoamines are oxidized to aldehydes by MAOA and MAOB, producing NH3 and H2O2 Mtb iron assimilation by chelation
Mucopolysaccharidoses Multifunctional anion exchangers
Muscarinic acetylcholine receptors Muscle contraction
MyD88 cascade initiated on plasma membrane MyD88 dependent cascade initiated on endosome
MyD88-independent cascade MyD88:Mal cascade initiated on plasma membrane
Myoclonic epilepsy of Lafora Myogenesis
N-Glycan antennae elongation N-glycan antennae elongation in the medial/trans-Golgi
N-glycan trimming and elongation in the cis-Golgi N-glycan trimming in the ER and Calnexin/Calreticulin cycle
NADE modulates death signalling NADPH regeneration
NCAM signaling for neurite out-growth NCAM1 interactions
NEP/NS2 Interacts with the Cellular Export Machinery NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10
NF-kB is activated and signals survival NFG and proNGF binds to p75NTR
NGF processing NGF signalling via TRKA from the plasma membrane
NGF-independant TRKA activation NICD traffics to nucleus
NOD1/2 Signaling Pathway NOSIP mediated eNOS trafficking
NOSTRIN mediated eNOS trafficking NOTCH1 Intracellular Domain Regulates Transcription
NOTCH2 Activation and Transmission of Signal to the Nucleus NOTCH2 intracellular domain regulates transcription
NRAGE signals death through JNK NRIF signals cell death from the nucleus
NS1 Mediated Effects on Host Pathways Na+-dependent glucose transporters
Na+/Cl- dependent neurotransmitter transporters Nectin/Necl trans heterodimerization
Nef Mediated CD4 Down-regulation Nef Mediated CD8 Down-regulation
Nef and signal transduction Nef mediated downregulation of CD28 cell surface expression
Nef mediated downregulation of MHC class I complex cell surface expression Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters
Negative epigenetic regulation of rRNA expression Negative regulation of FGFR signaling
Negative regulation of the PI3K/AKT network Negative regulators of RIG-I/MDA5 signaling
Nephrin interactions Netrin mediated repulsion signals
Netrin-1 signaling Neurofascin interactions
Neuronal System Neurophilin interactions with VEGF and VEGFR
Neurotoxicity of clostridium toxins Neurotransmitter Clearance In The Synaptic Cleft
Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell Neurotransmitter Release Cycle
Neurotransmitter uptake and Metabolism In Glial Cells Nicotinamide salvaging
Nicotinate metabolism Nitric oxide stimulates guanylate cyclase
NoRC negatively regulates rRNA expression Non-integrin membrane-ECM interactions
Nonhomologous End-joining (NHEJ) Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) Nonsense-Mediated Decay (NMD)
Norepinephrine Neurotransmitter Release Cycle Notch-HLH transcription pathway
NrCAM interactions Nuclear Envelope Breakdown
Nuclear Envelope Reassembly Nuclear Events (kinase and transcription factor activation)
Nuclear Pore Complex (NPC) Disassembly Nuclear Receptor transcription pathway
Nuclear import of Rev protein Nuclear signaling by ERBB4
Nucleosome assembly Nucleotide Excision Repair
Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways Nucleotide-like (purinergic) receptors
O-glycosylation of TSR domain-containing proteins O-linked glycosylation
O-linked glycosylation of mucins O2/CO2 exchange in erythrocytes
Olfactory Signaling Pathway Oligomerization of connexins into connexons
Oncogene Induced Senescence Opioid Signalling
Opsins Orc1 removal from chromatin
Orexin and neuropeptides FF and QRFP bind to their respective receptors Organelle biogenesis and maintenance
Organic anion transport Organic anion transporters
Organic cation transport Organic cation/anion/zwitterion transport
Other semaphorin interactions Oxidative Stress Induced Senescence
Oxygen-dependent asparagine hydroxylation of Hypoxia-inducible Factor Alpha Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
P2Y receptors PCP/CE pathway
PD-1 signaling PDE3B signalling
PECAM1 interactions PERK regulates gene expression
PI Metabolism PI and PC transport between ER and Golgi membranes
PI-3K cascade PI3K Cascade
PI3K events in ERBB2 signaling PI3K events in ERBB4 signaling
PI3K/AKT Signaling in Cancer PI3K/AKT activation
PIP3 activates AKT signaling PKA activation
PKA activation in glucagon signalling PKA-mediated phosphorylation of CREB
PKA-mediated phosphorylation of key metabolic factors PKB-mediated events
PLC beta mediated events PLC-gamma1 signalling
PLC-mediated hydrolysis of PIP2 PLCG1 events in ERBB2 signaling
POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation POU5F1 (OCT4), SOX2, NANOG repress genes related to differentiation
PP2A-mediated dephosphorylation of key metabolic factors PPARA activates gene expression
PRC2 methylates histones and DNA PTM: gamma carboxylation, hypusine formation and arylsulfatase activation
Packaging Of Telomere Ends Passive transport by Aquaporins
Pausing and recovery of HIV elongation Pausing and recovery of Tat-mediated HIV elongation
Pentose phosphate pathway (hexose monophosphate shunt) Peptide chain elongation
Peptide hormone biosynthesis Peptide hormone metabolism
Peptide ligand-binding receptors Peroxisomal lipid metabolism
Phagosomal maturation (early endosomal stage) Phase 1 - Functionalization of compounds
Phase II conjugation Phenylalanine and tyrosine catabolism
Phosphate bond hydrolysis by NUDT proteins Phospholipase C-mediated cascade
Phospholipid metabolism Phosphorylation of CD3 and TCR zeta chains
Phosphorylation of Emi1 Phosphorylation of proteins involved in G1/S transition by active Cyclin E:Cdk2 complexes
Phosphorylation of proteins involved in the G2/M transition by Cyclin A:Cdc2 complexes Phosphorylation of the APC/C
Plasmalogen biosynthesis Platelet Adhesion to exposed collagen
Platelet Aggregation (Plug Formation) Platelet activation, signaling and aggregation
Platelet calcium homeostasis Platelet degranulation
Platelet homeostasis Platelet sensitization by LDL
Plus-strand DNA synthesis Polo-like kinase mediated events
Polyamines are oxidized to amines, aldehydes and H2O2 by PAOs Polymerase switching
Polymerase switching on the C-strand of the telomere Post NMDA receptor activation events
Post-Elongation Processing of Intron-Containing pre-mRNA Post-Elongation Processing of Intronless pre-mRNA
Post-Elongation Processing of the Transcript Post-chaperonin tubulin folding pathway
Post-transcriptional silencing by small RNAs Post-translational modification: synthesis of GPI-anchored proteins
Post-translational protein modification Postsynaptic nicotinic acetylcholine receptors
Potassium Channels Potassium transport channels
Pre-NOTCH Expression and Processing Pre-NOTCH Processing in Golgi
Pre-NOTCH Processing in the Endoplasmic Reticulum Pre-NOTCH Transcription and Translation
Prefoldin mediated transfer of substrate to CCT/TriC Pregnenolone biosynthesis
Presynaptic function of Kainate receptors Presynaptic nicotinic acetylcholine receptors
Presynaptic phase of homologous DNA pairing and strand exchange Processing and activation of SUMO
Processing of Capped Intron-Containing Pre-mRNA Processing of Capped Intronless Pre-mRNA
Processing of DNA double-strand break ends Processing of DNA ends prior to end rejoining
Processing of Intronless Pre-mRNAs Processive synthesis on the C-strand of the telomere
Processive synthesis on the lagging strand Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
Prolactin receptor signaling Proline catabolism
Prolonged ERK activation events Propionyl-CoA catabolism
Prostacyclin signalling through prostacyclin receptor Prostanoid ligand receptors
Protein folding Proton-coupled monocarboxylate transport
Proton-coupled neutral amino acid transporters Proton/oligonucleotide cotransporters
Purine catabolism Purine metabolism
Purine ribonucleoside monophosphate biosynthesis Purine salvage
Pyrimidine biosynthesis Pyrimidine catabolism
Pyrimidine metabolism Pyrimidine salvage reactions
Pyrophosphate hydrolysis Pyruvate metabolism
Pyruvate metabolism and Citric Acid (TCA) cycle RAF activation
RAF phosphorylates MEK RAF/MAP kinase cascade
REV-ERBA represses gene expression RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
RIP-mediated NFkB activation via ZBP1 RNA Pol II CTD phosphorylation and interaction with CE
RNA Polymerase I Chain Elongation RNA Polymerase I Promoter Clearance
RNA Polymerase I Promoter Escape RNA Polymerase I Promoter Opening
RNA Polymerase I Transcription RNA Polymerase I Transcription Initiation
RNA Polymerase I Transcription Termination RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription
RNA Polymerase II HIV Promoter Escape RNA Polymerase II Pre-transcription Events
RNA Polymerase II Promoter Escape RNA Polymerase II Transcription
RNA Polymerase II Transcription Elongation RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Termination RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Chain Elongation RNA Polymerase III Transcription
RNA Polymerase III Transcription Initiation RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter RNA Polymerase III Transcription Initiation From Type 3 Promoter
RNA Polymerase III Transcription Termination RORA activates circadian gene expression
RSK activation Rap1 signalling
Ras activation uopn Ca2+ infux through NMDA receptor Reactions specific to the complex N-glycan synthesis pathway
Reactions specific to the hybrid N-glycan synthesis pathway Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
Recognition and association of DNA glycosylase with site containing an affected purine Recognition and association of DNA glycosylase with site containing an affected pyrimidine
Recruitment of NuMA to mitotic centrosomes Recruitment of mitotic centrosome proteins and complexes
Recruitment of repair and signaling proteins to double-strand breaks Recycling of bile acids and salts
Recycling of eIF2:GDP Recycling pathway of L1
Reduction of cytosolic Ca++ levels Regulated proteolysis of p75NTR
Regulation by TREX1 Regulation by c-FLIP
Regulation of AMPK activity via LKB1 Regulation of APC/C activators between G1/S and early anaphase
Regulation of Apoptosis Regulation of Commissural axon pathfinding by Slit and Robo
Regulation of Complement cascade Regulation of DNA replication
Regulation of Glucokinase by Glucokinase Regulatory Protein Regulation of HSF1-mediated heat shock response
Regulation of Hypoxia-inducible Factor (HIF) by oxygen Regulation of IFNA signaling
Regulation of IFNG signaling Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Regulation of KIT signaling Regulation of PAK-2p34 activity by PS-GAP/RHG10
Regulation of PLK1 Activity at G2/M Transition Regulation of Rheb GTPase activity by AMPK
Regulation of actin dynamics for phagocytic cup formation Regulation of activated PAK-2p34 by proteasome mediated degradation
Regulation of beta-cell development Regulation of cholesterol biosynthesis by SREBP (SREBF)
Regulation of cytoskeletal remodeling and cell spreading by IPP complex components Regulation of gap junction activity
Regulation of gene expression by Hypoxia-inducible Factor Regulation of gene expression in beta cells
Regulation of gene expression in early pancreatic precursor cells Regulation of gene expression in endocrine-committed (NEUROG3+) progenitor cells
Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells Regulation of innate immune responses to cytosolic DNA
Regulation of insulin secretion Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)
Regulation of mRNA stability by proteins that bind AU-rich elements Regulation of mitotic cell cycle
Regulation of ornithine decarboxylase (ODC) Regulation of pyruvate dehydrogenase (PDH) complex
Regulation of signaling by CBL Regulation of signaling by NODAL
Regulation of the Fanconi anemia pathway Regulation of thyroid hormone activity
Regulation of water balance by renal Aquaporins Regulatory RNA pathways
Relaxin receptors Release of apoptotic factors from the mitochondria
Release of eIF4E Removal of DNA patch containing abasic residue
Removal of aminoterminal propeptides from gamma-carboxylated proteins Removal of licensing factors from origins
Removal of the Flap Intermediate Removal of the Flap Intermediate from the C-strand
Repair synthesis for gap-filling by DNA polymerase in TC-NER Repair synthesis of patch ~27-30 bases long by DNA polymerase
Reproduction Resolution of AP sites via the multiple-nucleotide patch replacement pathway
Resolution of AP sites via the single-nucleotide replacement pathway Resolution of Abasic Sites (AP sites)
Resolution of D-loop structures Resolution of D-loop structures through Holliday junction intermediates
Resolution of Sister Chromatid Cohesion Respiratory electron transport
Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. Response of Mtb to phagocytosis
Response to elevated platelet cytosolic Ca2+ Retinoid cycle disease events
Retinoid metabolism and transport Retrograde neurotrophin signalling
Reuptake of GABA Rev-mediated nuclear export of HIV RNA
Reversal of Alkylation Damage By DNA Dioxygenases Reverse Transcription of HIV RNA
Reversible hydration of carbon dioxide Rhesus glycoproteins mediate ammonium transport.
Rho GTPase cycle Ribosomal scanning and start codon recognition
Role of Abl in Robo-Slit signaling Role of DCC in regulating apoptosis
Role of LAT2/NTAL/LAB on calcium mobilization Role of phospholipids in phagocytosis
Role of second messengers in netrin-1 signaling S Phase
S6K1 signalling S6K1-mediated signalling
SCF(Skp2)-mediated degradation of p27/p21 SCF-beta-TrCP mediated degradation of Emi1
SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion SHC activation
SHC-mediated cascade SHC-mediated signalling
SHC-related events SHC-related events triggered by IGF1R
SHC1 events in EGFR signaling SHC1 events in ERBB2 signaling
SHC1 events in ERBB4 signaling SIRT1 negatively regulates rRNA Expression
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs SLBP independent Processing of Histone Pre-mRNAs
SLC-mediated transmembrane transport SMAC binds to IAPs
SMAC-mediated apoptotic response SMAC-mediated dissociation of IAP:caspase complexes
SMAD2/3 MH2 Domain Mutants in Cancer SMAD2/3 Phosphorylation Motif Mutants in Cancer
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription SMAD4 MH2 Domain Mutants in Cancer
SOS-mediated signalling SRP-dependent cotranslational protein targeting to membrane
STAT6-mediated induction of chemokines STING mediated induction of host immune responses
SUMO is conjugated to E1 (UBA2:SAE1) SUMO is proteolytically processed
SUMO is transferred from E1 to E2 (UBE2I, UBC9) SUMOylation
Scavenging by Class A Receptors Scavenging by Class B Receptors
Scavenging by Class F Receptors Scavenging by Class H Receptors
Scavenging of heme from plasma Sema3A PAK dependent Axon repulsion
Sema4D in semaphorin signaling Sema4D induced cell migration and growth-cone collapse
Sema4D mediated inhibition of cell attachment and migration Semaphorin interactions
Senescence-Associated Secretory Phenotype (SASP) Separation of Sister Chromatids
Serine biosynthesis Serotonin Neurotransmitter Release Cycle
Serotonin and melatonin biosynthesis Serotonin clearance from the synaptic cleft
Serotonin receptors Sialic acid metabolism
Signal Transduction Signal amplification
Signal attenuation Signal regulatory protein (SIRP) family interactions
Signal transduction by L1 Signaling by Activin
Signaling by BMP Signaling by EGFR
Signaling by EGFR in Cancer Signaling by ERBB2
Signaling by ERBB4 Signaling by FGFR
Signaling by FGFR in disease Signaling by FGFR mutants
Signaling by FGFR1 amplification mutants Signaling by FGFR1 fusion mutants
Signaling by FGFR1 mutants Signaling by FGFR2 amplification mutants
Signaling by FGFR2 mutants Signaling by FGFR3 mutants
Signaling by FGFR4 mutants Signaling by GPCR
Signaling by Hippo Signaling by Insulin receptor
Signaling by Interleukins Signaling by Leptin
Signaling by NODAL Signaling by NOTCH
Signaling by NOTCH1 Signaling by NOTCH1 HD Domain Mutants in Cancer
Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer Signaling by NOTCH1 PEST Domain Mutants in Cancer
Signaling by NOTCH1 in Cancer Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant
Signaling by NOTCH2 Signaling by NOTCH3
Signaling by NOTCH4 Signaling by PDGF
Signaling by Rho GTPases Signaling by Robo receptor
Signaling by SCF-KIT Signaling by TGF-beta Receptor Complex
Signaling by TGF-beta Receptor Complex in Cancer Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
Signaling by VEGF Signaling by Wnt
Signaling by activated point mutants of FGFR1 Signaling by activated point mutants of FGFR3
Signaling by constitutively active EGFR Signaling by the B Cell Receptor (BCR)
Signalling by NGF Signalling to ERK5
Signalling to ERKs Signalling to RAS
Signalling to STAT3 Signalling to p38 via RIT and RIN
Small interfering RNA (siRNA) biogenesis Smooth Muscle Contraction
Sodium-coupled phosphate cotransporters Sodium-coupled sulphate, di- and tri-carboxylate transporters
Sodium/Calcium exchangers Sodium/Proton exchangers
Sperm Motility And Taxes Sperm:Oocyte Membrane Binding
Sphingolipid de novo biosynthesis Sphingolipid metabolism
Spry regulation of FGF signaling Stabilization of p53
Steroid hormones Sterols are 12-hydroxylated by CYP8B1
Stimulation of the cell death response by PAK-2p34 Stimuli-sensing channels
Striated Muscle Contraction Sulfide oxidation to sulfate
Sulfur amino acid metabolism Switching of origins to a post-replicative state
Syndecan interactions Synthesis and interconversion of nucleotide di- and triphosphates
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE) Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of 15-eicosatetraenoic acid derivatives Synthesis of 5-eicosatetraenoic acids
Synthesis of CL Synthesis of DNA
Synthesis of Dolichyl-phosphate Synthesis of GDP-mannose
Synthesis of Hepoxilins (HX) and Trioxilins (TrX) Synthesis of IP2, IP, and Ins in the cytosol
Synthesis of IP3 and IP4 in the cytosol Synthesis of IPs in the ER lumen
Synthesis of IPs in the nucleus Synthesis of Ketone Bodies
Synthesis of Leukotrienes (LT) and Eoxins (EX) Synthesis of Lipoxins (LX)
Synthesis of PA Synthesis of PC
Synthesis of PE Synthesis of PG
Synthesis of PI Synthesis of PIPs at the ER membrane
Synthesis of PIPs at the Golgi membrane Synthesis of PIPs at the early endosome membrane
Synthesis of PIPs at the late endosome membrane Synthesis of PIPs at the plasma membrane
Synthesis of PS Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
Synthesis of UDP-N-acetyl-glucosamine Synthesis of bile acids and bile salts
Synthesis of bile acids and bile salts via 24-hydroxycholesterol Synthesis of bile acids and bile salts via 27-hydroxycholesterol
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol Synthesis of dolichyl-phosphate mannose
Synthesis of dolichyl-phosphate-glucose Synthesis of epoxy (EET) and dihydroxyeicosatrienoic acids (DHET)
Synthesis of glycosylphosphatidylinositol (GPI) Synthesis of pyrophosphates in the cytosol
Synthesis of substrates in N-glycan biosythesis Synthesis of very long-chain fatty acyl-CoAs
Synthesis, secretion, and deacylation of Ghrelin Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) TAK1 activates NFkB by phosphorylation and activation of IKKs complex
TCF dependent signaling in response to WNT TCR signaling
TET1,2,3 and TDG demethylate DNA TGF-beta receptor signaling activates SMADs
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) TGFBR1 KD Mutants in Cancer
TGFBR1 LBD Mutants in Cancer TGFBR2 Kinase Domain Mutants in Cancer
TGFBR2 MSI Frameshift Mutants in Cancer TNF signaling
TRAF3-dependent IRF activation pathway TRAF6 Mediated Induction of proinflammatory cytokines
TRAF6 mediated IRF7 activation TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
TRAF6 mediated NF-kB activation TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
TRAF6 mediated induction of TAK1 complex TRAIL signaling
TRIF-mediated TLR3/TLR4 signaling TRIF-mediated programmed cell death
TRKA activation by NGF TRP channels
TWIK related potassium channel (TREK) TWIK-related alkaline pH activated K+ channel (TALK)
TWIK-related spinal cord K+ channel (TRESK) TWIK-releated acid-sensitive K+ channel (TASK)
Tachykinin receptors bind tachykinins Tandem of pore domain in a weak inwardly rectifying K+ channels (TWIK)
Tandem pore domain halothane-inhibited K+ channel (THIK) Tandem pore domain potassium channels
Tat-mediated HIV elongation arrest and recovery Tat-mediated elongation of the HIV-1 transcript
Telomere C-strand (Lagging Strand) Synthesis Telomere C-strand synthesis initiation
Telomere Extension By Telomerase Telomere Maintenance
Terminal pathway of complement Termination of O-glycan biosynthesis
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation The AIM2 inflammasome
The IPAF inflammasome The NLRP1 inflammasome
The NLRP3 inflammasome The activation of arylsulfatases
The canonical retinoid cycle in rods (twilight vision) The citric acid (TCA) cycle and respiratory electron transport
The fatty acid cycling model The phototransduction cascade
The proton buffering model The retinoid cycle in cones (daylight vision)
The role of Nef in HIV-1 replication and disease pathogenesis Thrombin signalling through proteinase activated receptors (PARs)
Thromboxane signalling through TP receptor Thyroxine biosynthesis
Tie2 Signaling Tight junction interactions
Toll Like Receptor 10 (TLR10) Cascade Toll Like Receptor 2 (TLR2) Cascade
Toll Like Receptor 3 (TLR3) Cascade Toll Like Receptor 4 (TLR4) Cascade
Toll Like Receptor 5 (TLR5) Cascade Toll Like Receptor 7/8 (TLR7/8) Cascade
Toll Like Receptor 9 (TLR9) Cascade Toll Like Receptor TLR1:TLR2 Cascade
Toll Like Receptor TLR6:TLR2 Cascade Toll-Like Receptors Cascades
Toxicity of botulinum toxin type A (BoNT/A) Toxicity of botulinum toxin type B (BoNT/B)
Toxicity of botulinum toxin type C (BoNT/C) Toxicity of botulinum toxin type D (BoNT/D)
Toxicity of botulinum toxin type E (BoNT/E) Toxicity of botulinum toxin type F (BoNT/F)
Toxicity of botulinum toxin type G (BoNT/G) Trafficking and processing of endosomal TLR
Trafficking of AMPA receptors Trafficking of GluR2-containing AMPA receptors
Trafficking of dietary sterols Transcription
Transcription from mitochondrial promoters Transcription of the HIV genome
Transcription-coupled NER (TC-NER) Transcriptional activation of cell cycle inhibitor p21
Transcriptional activation of mitochondrial biogenesis Transcriptional activation of p53 responsive genes
Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer Transcriptional regulation of pluripotent stem cells
Transcriptional regulation of white adipocyte differentiation Transfer of LPS from LBP carrier to CD14
Transferrin endocytosis and recycling Translation
Translation initiation complex formation Translesion synthesis by DNA polymerases bypassing lesion on DNA template
Translesion synthesis by HREV1 Translesion synthesis by Pol eta
Translesion synthesis by Pol zeta Translocation of GLUT4 to the plasma membrane
Translocation of ZAP-70 to Immunological synapse Transmembrane transport of small molecules
Transmission across Chemical Synapses Transmission across Electrical Synapses
Transport and synthesis of PAPS Transport of Mature Transcript to Cytoplasm
Transport of Mature mRNA Derived from an Intronless Transcript Transport of Mature mRNA derived from an Intron-Containing Transcript
Transport of Mature mRNAs Derived from Intronless Transcripts Transport of Ribonucleoproteins into the Host Nucleus
Transport of connexins along the secretory pathway Transport of connexons to the plasma membrane
Transport of fatty acids Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds Transport of glycerol from adipocytes to the liver by Aquaporins
Transport of inorganic cations/anions and amino acids/oligopeptides Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane
Transport of nucleotide sugars Transport of organic anions
Transport of the SLBP Dependant Mature mRNA Transport of the SLBP independent Mature mRNA
Transport of vitamins, nucleosides, and related molecules Transport to the Golgi and subsequent modification
Triglyceride Biosynthesis Tristetraprolin (TTP) destabilizes mRNA
Tryptophan catabolism Type I hemidesmosome assembly
Type II Na+/Pi cotransporters Ubiquinol biosynthesis
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A Ubiquitin-dependent degradation of Cyclin D
Ubiquitin-dependent degradation of Cyclin D1 Unblocking of NMDA receptor, glutamate binding and activation
Uncoating of the HIV Virion Unfolded Protein Response (UPR)
Unwinding of DNA Urea cycle
Utilization of Ketone Bodies VEGF binds to VEGFR leading to receptor dimerization
VEGF ligand-receptor interactions Vasopressin-like receptors
Vif-mediated degradation of APOBEC3G Viral Messenger RNA Synthesis
Viral RNP Complexes in the Host Cell Nucleus Viral mRNA Translation
Virus Assembly and Release Visual phototransduction
Vitamin B1 (thiamin) metabolism Vitamin B2 (riboflavin) metabolism
Vitamin B5 (pantothenate) metabolism Vitamin C (ascorbate) metabolism
Vitamin D (calciferol) metabolism Vitamins
Vitamins B6 activation to pyridoxal phosphate Voltage gated Potassium channels
Vpr-mediated induction of apoptosis by mitochondrial outer membrane permeabilization Vpr-mediated nuclear import of PICs
Vpu mediated degradation of CD4 WNT ligand biogenesis and trafficking
WNT mediated activation of DVL WNT5A-dependent internalization of FZD2, FZD5 and ROR2
WNT5A-dependent internalization of FZD4 XBP1(S) activates chaperone genes
Xenobiotics YAP1- and WWTR1 (TAZ)-stimulated gene expression
ZBP1(DAI) mediated induction of type I IFNs Zinc efflux and compartmentalization by the SLC30 family
Zinc influx into cells by the SLC39 gene family Zinc transporters
activated TAK1 mediates p38 MAPK activation alpha-linolenic (omega3) and linoleic (omega6) acid metabolism
alpha-linolenic acid (ALA) metabolism beta-catenin independent WNT signaling
betaKlotho-mediated ligand binding binding of TCF/LEF:CTNNB1 to target gene promoters
c-src mediated regulation of Cx43 function and closure of gap junctions cGMP effects
deactivation of the beta-catenin transactivating complex degradation of AXIN
degradation of DVL disassembly of the destruction complex and recruitment of AXIN to the membrane
eNOS activation eNOS activation and regulation
formation of the beta-catenin:TCF transactivating complex mRNA 3'-end processing
mRNA Capping mRNA Editing
mRNA Editing: A to I Conversion mRNA Editing: C to U Conversion
mRNA Splicing mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway mRNA decay by 3' to 5' exoribonuclease
mRNA decay by 5' to 3' exoribonuclease mTOR signalling
mTORC1-mediated signalling mitochondrial fatty acid beta-oxidation of saturated fatty acids
mitochondrial fatty acid beta-oxidation of unsaturated fatty acids negative regulation of TCF-dependent signaling by WNT ligand antagonists
p130Cas linkage to MAPK signaling for integrins p38MAPK events
p53-Dependent G1 DNA Damage Response p53-Dependent G1/S DNA damage checkpoint
p53-Independent DNA Damage Response p53-Independent G1/S DNA damage checkpoint
p75 NTR receptor-mediated signalling p75NTR negatively regulates cell cycle via SC1
p75NTR recruits signalling complexes p75NTR regulates axonogenesis
p75NTR signals via NF-kB phospho-PLA2 pathway
regulation of FZD by ubiquitination snRNP Assembly
t(4;14) translocations of FGFR3 tRNA Aminoacylation
trans-Golgi Network Vesicle Budding vRNP Assembly
Wiki Pathways

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ACE Inhibitor Pathway AMPK signaling
Acetylcholine Synthesis Adipocyte TarBase
Adipogenesis Aflatoxin B1 metabolism
Alanine and aspartate metabolism Alpha 6 Beta 4 signaling pathway
Alzheimers Disease Androgen receptor signaling pathway
Angiogenesis Apoptosis
Apoptosis Modulation and Signaling Apoptosis Modulation by HSP70
Arachidonate Epoxygenase / Epoxide Hydrolase Arylamine metabolism
B Cell Receptor Signaling Pathway BMP signalling and regulation
Benzo(a)pyrene metabolism Biogenic Amine Synthesis
Blood Clotting Cascade Calcium Regulation in the Cardiac Cell
Catalytic cycle of mammalian FMOs Cell Differentiation - Index
Cell Differentiation - meta Cell cycle
Cholesterol Biosynthesis Codeine and morphine metabolism
Complement Activation, Classical Pathway Complement and Coagulation Cascades
Cori Cycle Cytokines and Inflammatory Response
Cytoplasmic Ribosomal Proteins DNA Replication
DNA damage response DNA damage response (only ATM dependent)
Diurnally regulated genes with circadian orthologs E2F/MIRHG1 feedback-loop
EBV LMP1 signaling EGF/EGFR Signaling Pathway
EPO Receptor Signaling Effects of nitric oxide
Eicosanoid Synthesis Electron Transport Chain
Endochondral Ossification Energy Metabolism
Epithelium TarBase ErbB signaling pathway
Estrogen metabolism Estrogen signaling pathway
Eukaryotic Transcription Initiation FAS pathway and Stress induction of HSP regulation
FSH signaling pathway Fatty Acid Beta Oxidation
Fatty Acid Biosynthesis Fatty Acid Omega Oxidation
Fluoropyrimidine Activity Focal Adhesion
Folate Metabolism Folate-Alcohol and Cancer Pathway
G Protein Signaling Pathways G1 to S cell cycle control
G13 Signaling Pathway GPCRs, Class A Rhodopsin-like
GPCRs, Class B Secretin-like GPCRs, Class C Metabotropic glutamate, pheromone
GPCRs, Other Ganglio Sphingolipid Metabolism
Glucocorticoid & Mineralcorticoid Metabolism Glucuronidation
Glutathione metabolism Glycine Metabolism
Glycogen Metabolism Glycolysis and Gluconeogenesis
Heart Development Hedgehog Signaling Pathway
Heme Biosynthesis Homologous recombination
Hypertrophy Model Hypothetical Network for Drug Addiction
ID signaling pathway IL-1 signaling pathway
IL-2 Signaling pathway IL-3 Signaling Pathway
IL-4 signaling pathway IL-5 signaling pathway
IL-6 signaling pathway IL-7 signaling pathway
IL-9 signaling pathway Inflammatory Response Pathway
Insulin Signaling Integrated Breast Cancer Pathway
Integrated Cancer pathway Integrin-mediated cell adhesion
Irinotecan Pathway Keap1-Nrf2 Pathway
Kit receptor signaling pathway Leptin signaling pathway
Leukocyte TarBase Lymphocyte TarBase
MAPK Cascade MAPK signaling pathway
Matrix Metalloproteinases Methylation Pathways
MicroRNAs in cardiomyocyte hypertrophy Mismatch repair
Mitochondrial Gene Expression Mitochondrial LC-Fatty Acid Beta-Oxidation
Monoamine GPCRs Monoamine Transport
Muscle cell TarBase Myometrial Relaxation and Contraction Pathways
NLR proteins NOD pathway
Neural Crest Differentiation Nicotine Activity on Chromaffin Cells
Nicotine Activity on Dopaminergic Neurons Nicotine metabolism
Nifedipine Activity Non-homologous end joining
Notch Signaling Pathway Nuclear Receptors
Nuclear receptors in lipid metabolism and toxicity Nucleotide GPCRs
Nucleotide Metabolism One Carbon Metabolism
Osteoblast Signaling Osteoclast Signaling
Osteopontin Signaling Ovarian Infertility Genes
Oxidative Stress Oxidative phosphorylation
Pentose Phosphate Pathway Peptide GPCRs
Peroxisomal beta-oxidation of tetracosanoyl-CoA Phase I, non P450
Physiological and Pathological Hypertrophy of the Heart Polyol pathway
Prolactin Signaling Pathway Prostaglandin Synthesis and Regulation
Proteasome Degradation Proteins and DNA Sequences in Cardicac Structures
RANKL/RANK Signaling Pathway Regulation of Actin Cytoskeleton
Regulation of toll-like receptor signaling pathway SIDS Susceptibility Pathways
SREBF and miR33 in cholesterol and lipid homeostasis SREBP signalling
SRF and miRs in Smooth Muscle Differentiation and Proliferation Selenium Metabolism and Selenoproteins
Selenium Pathway Senescence and Autophagy
Serotonin HTR1 Group and FOS Pathway Serotonin Receptor 2 and ELK-SRF/GATA4 signaling
Serotonin Receptor 2 and STAT3 Signaling Serotonin Receptor 4/6/7 and NR3C Signaling
Serotonin Transporter Activity Signal Transduction of S1P Receptor
Signaling of Hepatocyte Growth Factor Receptor Small Ligand GPCRs
Squamous cell TarBase Statin Pathway
Steroid Biosynthesis Striated Muscle Contraction
Sulfation Biotransformation Reaction Synthesis and Degradation of Ketone Bodies
TCA BCH6203 TCA Cycle
TCR Signaling Pathway TFs Regulate miRNAs related to cardiac hypertrophy
TGF Beta Signaling Pathway TGF beta Signaling Pathway
TNF alpha Signaling Pathway TOR signaling
TP53 network TSH signaling pathway
TWEAK Signaling Pathway Tamoxifen metabolism
TarBasePathway Th1/Th2
Toll-like receptor signaling pathway Translation Factors
Triacylglyceride Synthesis Tryptophan metabolism
Type II diabetes mellitus Type II interferon signaling (IFNG)
Urea cycle and metabolism of amino groups Vitamin A and carotenoid metabolism
Vitamin B12 Metabolism Vitamin D synthesis
Wnt Signaling Pathway Wnt Signaling Pathway and Pluripotency
amino acid conjugation of benzoic acid angiogenesis overview
cytochrome P450 iron metabolism in placenta
mRNA processing metapathway biotransformation
miRNA regulation of DNA Damage Response miRNAs involved in DDR
miRs in Muscle Cell Differentiation p38 MAPK Signaling Pathway

Vector

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To view a list of all empty vectors and their descriptions visit our empty vector page. Or search by vector features using our Plasmid Feature Search option.

Authors


A-D         E-H         I-L         M-P         Q-T         U-W         X-Z         PSI        

A


A.M., Zorn
Abdullah, James
Accelerated Technologies Center for Gene to 3D Structure 
Acton, Thomas
Adama, Deborah
Alam, Steven
Albert Einstein College of Medicine 
Almo, Steven
Anderson, Stephen
Anderson, Karen
Aota, Shin-ichi
Arbing, Mark
Argonne National Laboratory and National Cancer Institute Clinical Proteomic Technologies for Cancer 
Arii, Jun
Arizona State University 
Arrowsmith, Cheryl
Arsalon, Betul Kacar

B


BD Biosciences Clontech 
BEI Resources 
Baci, Ira
Bagdanaviciute, J
Bajorek, Monika
Bargassa, Monireh
Barrett, Cassandra
Bearden, Jessica
Bentley, Shayla
Berkeley Structural Genomics Center 
Bian, Xiaofang
Blanksma, Mary
Blommel, Paul
Borger, Darrell
Brady, Eileen
Bristol-Myers Squibb 
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT) 
Brumm, Phil
Brune, W
Buck, Kimberly

C


CCL 
Cairns, Bradley
Caluseriu, Oana
Campbell, Ellior
Carroll, Jodi
Center for Cancer Systems Biology 
Center for Eukaryotic Structural Genomics 
Center for High Throughput Structural Biology 
Center for Membrane Proteins in Infectious Diseases 
Center for Personalized Diagnostics 
Center for Structures of Membrane Proteins 
Center for the X-ray Structure Determination of Human Transporters 
Chambon, Pierre
Chan, Ho Man
Chang, Yong
Chang, Geoffrey
Chen, Junjui
Chen, Joy
Cheung, Jonah
Chiang, Su
Choe, Juno
Chou, James
Christensen, Devin
Chung, HY1
Chung, Hyo-Young
Cincinnati Children's Hospital Medical Center 
Clancy, Shonda
Clark, Kathleen
Clinger, Jonathan
Cobb, Garrett
Coen, Donald
Colf, Leremy
Collaboration, ORFeome
Collart, Frank
Colwill, Karen
Connelly, Sara
Craciunescu, Felicia
Craciunescu, Felicia
Craciunescu, Felicia

D


D., Balcha
D.E., Hill
DNA2.0 
Daer, Rene
Dana-Farber Cancer Institute 
Daskalova, Sasha
DeCaprio, James
DeLuca, Carl
Del Moral, Lerys
Delvecchio, F
Dhodda, Vinay
Donnelly, Mark
Dowlatshahi, DP
Dumont, Mark

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E


Eaton, Seron
Ecker, Joseph
Eckner, R
Edmondson, Dale
Elledge, Steve
Emory University 
Endres, Michael
Enzyme Discovery for Natural Product Biosynthesis 
Evans, T
Ewaisha, Radwa

F


Falvo, James
Fedoriw, Nadia
Feldmann, Brian
Ferris, Elliot
Festa, Fernanda
Formosa, Tim
Fox, Brian
Franklin, Matthew
Freeman, Laura
Fromme, Petra
Fuchs, Miriam
Fuentes, Manuel
Fukumoto, Emiko

G


GI, Karras
GPCR Network 
Galli, Mary
Garforth, Scott
Garfoth, Scott
Gelfand, Ellen
Genomics Institute of the Novartis Research Foundation 
Gerlt, JA
Gilchrist, Michael
Gileadi, Opher
Gonciarz, Malgorzata
Gong, Zhen
Gonzalez, Laura
Gu, Minyi
Guan, KL
Gutkind, Silvio

H


HIP 
Hamilton, I. Baci
Han, Han
Hanken, James
Hansen, Debbie
Harlow, Ed
Harries, William
Harvard Medical School 
Haynes, Karmella
Henrie, Brandon
Heroux, Annie
Hill, David
Hill, Christopher
Hill, David
Hinata, Kaede
Hobom, U
Hogue, Brenda
Holzle, Denise
Howley, Peter
Huh, WK
Huibregtse, J
Humphries, Martin

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I


Integrated Center for Structure and Function Innovation 
Invitrogen 
Issner, Robbyn
Izumiya, Y

J


J. Craig Venter Institute 
Jedrzejczak, Robert
Judson, Nicholas

K


K., Spirohn
Kaiser, SE
Kamil, Jeremy
Karren, Mary Anne
Kasper, Jocelyn
Kasten, Margaret
Katsuyama, Angela
Keigher, Laura
Kemble, David
Kerney, Ryan
Khoury, G
Kiani, Samira
Kieffer, Collin
Klock, Heath
Knappenberger, Mark
Kopito, RR
Korpal, Manav
Korsmeyer, Stanley
Koszinowski, UH
Kotagama, Kasuen
Kr0usslich, HG
Kramer, Rebecca
Kumar, S
Kung, HJ
Kuperwasser, Charlotte

L


LaBaer, Joshua
Lalonde, Matthew
Lambert, P
Lau, Al
Lawrence Berkeley National Laboratory 
Lecine, P
Lee, YJ
Lee, Chang-Wook
Lee, Jeng-Shin
Lei, Q
Lepourcelet, M
Letai, Tony
Lewis, Allison
Li, Han
Li, L
Lin, Su-Fang
Liu, CY
Livingston, David
Lodding, Cynthia
Lohman, Jeremy
Lorenz, Ulrike
Love, James
Lu, Q
Lubys, A.
Luna, Rafael

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M


M.J., Gilchrist
MRC National Institute for Medical Research 
Malik, Talat
Mandava, Suneeta
Mangone, Marco
Matsumoto, Kazue
McBride, A
McCullough, Laura
McCullough, John
Mead, David
Mekalanos, John
Melandri, F.
Membrane Protein Structural Biology Consortium 
Membrane Protein Structures by Solution NMR 
Mercenne, Gaelle
Meshay, Ian
Midwest Center for Structural Genomics 
Miersch, Shane
Mitochondrial Protein Partnership 
Miyamoto, Shingo
Monroe, Nicole
Montleione, Gaetano
Moore, Victoria
Moqtaderi, Zarmik
Moremen, Kelley
Morita, Eiji
Moy, Shiu
Muller, B
Munger, K
Murugan, Vel

N


N, Balasubramanian
NG, Economos
NIDCR 
Naar, Anders
National Cancer Institute Clinical Proteomic Technologies for Cancer 
Neel, Benjamin
New York Consortium on Membrane Protein Structure 
New York SGX Research Center for Structural Genomics 
New York Structural Biology Center 
New York Structural Genomics Research Consortium 
Nguyen, Tuan
Ning, Bo
Northeast Structural Genomics Consortium 

O


O'Shea, Erin
Osterrieder, Nikolaus

P


P.T., Stukenberg
PM, Glazer
PSI 
PSI:Biology 
Parcells, Mark
Pawson, Tony
Pearlberg, Joseph
Petritis, Brianne
Pioletti, Marta
Porter, Chris
Protein Capture Reagents Program 

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Q


Qiu, Ji

R


Ramachandran, Niroshan
Ramiah, Anna
Rawling, David
Rawlins, Robert
Resnik, Jack
Roberts, Thomas M
Robinson, Howard
Robinson, Daniel R
Ronco, L
Roo, David
Root, David
Rudolph, Michael
Rupp 
Rutgers University 

S


S.A., Rankin
SGX Pharmaceuticals, Inc. 
Sakai, H
Salk Institute 
Sandrin, V.
Sarver, N
Saul, Justin
Savchenko, A.
Scheffner, M
Schubert, Heidi
Scully, Ralph
Sculze, H
Seidel, Ron
Seto 
Shackelford, Grant
Shakya, Binita
Shaler, TA
Shifrin, Victor
Shivdasani, Ramesh
Shome, Mahasish
Silver, Pamela
Silver, Daniel
Singh, Shanteri
Soichet, Sarah
Song, Lusheng
Stegmeier, Frank
Stevens, Ray
Stillman, David
Structure-Function Studies of Tight Junction Membrane Proteins 
Stubblefield, William
Stukenberg, Todd
Sundquist, Wesley
Sykes, Kathy

T


T., Hao
Tamura, Masahito
Tan, Song
Tang, Yanyang
Taveras, Larissa
The FlyBi Consortium: BDGP/Celniker, CCSB/Vidal, DRSC/Perrimon 
The Scripps Research Institute 
The University of Chicago 
Thorn, Kurt
Throop, Andrea
Tischer, B Karsten
Tou, Derek
Transcontinental EM Initiative for Membrane Protein Structure 
Transmembrane Protein Center 
Turner 

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U


U, Thapar
Ubarretxena, Iban
University of Alberta 
University of California Los Angeles 
University of California San Francisco 
University of Georgia 
University of Kansas Medical Center 
University of Kentucky 
University of Minnesota 
University of Pittsburgh 
University of Rochester 
University of Toronto 
University of Utah 
University of Virginia School of Medicine 
University of Wisconsin 
University of Wisconsin Madison 
Upadhyay, Anup

V


VanDemark, Andrew
Varda, Bianca
Vega, MArk
Velasquez, Jeffrey
Velkov, Tony
Vierstra, Richard
Villa, Nancy
Viloria, Jennifer
Vivona, S.
Votteler, Jorg
Vought, Bryan

W


W.R., Pearson
Wackett, Lawrence
Wagner, Gerhard
Wang, Yongping
Wang, Huang
Wang, Jin
Wang, Weidong
Wang, LH
Wenzel, Dawn
Whitby, Frank
Will, Nathan
Wilmot, Carrie
Wittmeyer, Jacqueline
Wu, Beili

X


Xenopus Gene Collection 
Xia, Bing
Xin, Hua

Y


Y., Wang
Yamada, Kenneth
Yamamoto 
Yang, Yieyie
Yasugi, T
Yin 
Yoakim, Monique
Yu, Xiaobo
Yu, Alan

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Z


Zakareviciene, L.
Zhang, Leiliang
Zhao, Jean
Zhao, B
Zhou, P
Zhou, Pei
Zorn, Aaron

PSI


Joint Center for Structural Genomics
Midwest Center for Structural Genomics
New York Structural Genomics Research Consortium
Northeast Structural Genomics Consortium
Center for Membrane Proteins in Infectious Diseases
Center for Structures of Membrane Proteins
Center for the X-Ray Structure Determination of Human Transporters
GPCR Network
Membrane Protein Structural Biology Consortium
Membrane Protein Structures by Solution NMR
New York Consortium on Membrane Protein Structure
Transcontinental EM Initiative for Membrane Protein Structure
Transmembrane Protein Center
Enzyme Discovery for Natural Product Biosynthesis
Mitochondrial Protein Partnership
Structure-Function Studies of Tight Junction Membrane Proteins
Accelerated Technologies Center for Gene to 3D Structure
Berkeley Structural Genomics Center
Center for Eukaryotic Structural Genomics
Center for High Throughput Structural Biology
Integrated Center for Structure and Function Innovation
New York SGX Research Center for Structural Genomics

Researchers         Institution         Consortium        

Researchers

Acton, Thomas
Almo, Steven
Aota, Shin-ichi
Arbing, Mark
Arrowsmith, Cheryl
Arsalon, Betul Kacar
BD Biosciences Clontech 
Baci, Ira
Bearden, Jessica
Borger, Darrell
Brumm, Phil
Brune, W
Buck, Kimberly
Carroll, Jodi
Chambon, Pierre
Chan, Ho Man
Chang, Yong
Chang, Geoffrey
Chen, Junjui
Chen, Joy
Chiang, Su
Choe, Juno
Chou, James
Clancy, Shonda
Clark, Kathleen
Cobb, Garrett
Coen, Donald
Colwill, Karen
Connelly, Sara
DeCaprio, James
DeLuca, Carl
Delvecchio, F
Dhodda, Vinay
Donnelly, Mark
Dumont, Mark
Ecker, Joseph
Eckner, R
Edmondson, Dale
Elledge, Steve
Evans, T
Falvo, James
Fedoriw, Nadia
Feldmann, Brian
Festa, Fernanda
Fox, Brian
Fuchs, Miriam
Fuentes, Manuel
Fukumoto, Emiko
Galli, Mary
Gelfand, Ellen
Gonciarz, Malgorzata
Gonzalez, Laura
Gutkind, Silvio
Hanken, James
Harlow, Ed
Harries, William
Hill, David
Hill, Christopher
Hobom, U
Hogue, Brenda
Howley, Peter
Huh, WK
Huibregtse, J
Humphries, Martin
Issner, Robbyn
Izumiya, Y
Jedrzejczak, Robert
Judson, Nicholas
Kamil, Jeremy
Kasper, Jocelyn
Keigher, Laura
Kerney, Ryan
Khoury, G
Korpal, Manav
Korsmeyer, Stanley
Koszinowski, UH
Kramer, Rebecca
Kumar, S
Kung, HJ
Kuperwasser, Charlotte
LaBaer, Joshua
Lambert, P
Lau, Al
Lecine, P
Lee, YJ
Lee, Chang-Wook
Lee, Jeng-Shin
Lepourcelet, M
Letai, Tony
Lin, Su-Fang
Livingston, David
Lorenz, Ulrike
Luna, Rafael
Malik, Talat
Matsumoto, Kazue
McBride, A
Mead, David
Mekalanos, John
Miyamoto, Shingo
Monroe, Nicole
Montleione, Gaetano
Moore, Victoria
Moqtaderi, Zarmik
Moremen, Kelley
Munger, K
Naar, Anders
Neel, Benjamin
Nguyen, Tuan
O'Shea, Erin
Osterrieder, Nikolaus
PSI 
Parcells, Mark
Pawson, Tony
Pearlberg, Joseph
Petritis, Brianne
Pioletti, Marta
Porter, Chris
Qiu, Ji
Ramachandran, Niroshan
Roberts, Thomas M
Robinson, Daniel R
Ronco, L
Roo, David
Rupp 
Sakai, H
Sarver, N
Saul, Justin
Savchenko, A.
Scheffner, M
Scully, Ralph
Sculze, H
Seto 
Shackelford, Grant
Shakya, Binita
Shifrin, Victor
Shivdasani, Ramesh
Silver, Daniel
Soichet, Sarah
Stegmeier, Frank
Sykes, Kathy
Tamura, Masahito
Thorn, Kurt
Tischer, B Karsten
Tou, Derek
Turner 
Ubarretxena, Iban
Upadhyay, Anup
Vega, MArk
Velkov, Tony
Vierstra, Richard
Vought, Bryan
Wagner, Gerhard
Wang, Yongping
Wang, Jin
Will, Nathan
Xia, Bing
Yamada, Kenneth
Yamamoto 
Yang, Yieyie
Yasugi, T
Yin 
Yoakim, Monique
Zhao, Jean
Zhou, P
Zhou, Pei

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Institutions

Albert Einstein College of Medicine
Argonne National Laboratory and National Cancer Institute Clinical Proteomic Technologies for Cancer
Arizona State University
Bristol-Myers Squibb
Broad Institute of Harvard and Massachusetts Institute of Technology (MIT)
Center for Personalized Diagnostics
DNA2.0
Dana-Farber Cancer Institute
Emory University
Genomics Institute of the Novartis Research Foundation
HIP
Harvard Medical School
Lawrence Berkeley National Laboratory
Argonne National Laboratory
Midwest Center for Structural Genomics
NIDCR
New York Structural Biology Center
PSI:Biology
Rutgers University
SGX Pharmaceuticals, Inc.
Salk Institute
The Scripps Research Institute
University of California Los Angeles
University of California San Francisco
University of Georgia
University of Rochester
University of Toronto
University of Utah
University of Wisconsin
University of Wisconsin Madison

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Consortium

Recombinant Antibody Network
Accelerated Technologies Center for Gene to 3D Structure
Berkeley Structural Genomics Center
Center for Eukaryotic Structural Genomics
Center for High Throughput Structural Biology
Center for Membrane Proteins in Infectious Diseases
Center for Structures of Membrane Proteins
Center for the X-ray Structure Determination of Human Transporters
The ORFeome Collaboration
Enzyme Discovery for Natural Product Biosynthesis
GPCR Network
Integrated Center for Structure and Function Innovation
Joint Center for Structural Genomics
Membrane Protein Structural Biology Consortium
Membrane Protein Structures by Solution NMR
Midwest Center for Structural Genomics
National Cancer Institute Clinical Proteomic Technologies for Cancer
New York Consortium on Membrane Protein Structure
New York SGX Research Center for Structural Genomics
New York Structural Genomics Research Consortium
Northeast Structural Genomics Consortium
PSI
PSI:Biology
Protein Capture Reagents Program
Rutgers University
Transcontinental EM Initiative for Membrane Protein Structure

Species


A-D         E-H         I-L         M-P         Q-T         U-W         X-Z        

A


Acholeplasma laidlawii
Acidianus hospitalis W1
Acidimicrobium ferrooxidans
Acidithiobacillus ferrooxidans
Acidobacterium capsulatum
Acidothermus cellulolyticus
Acidovorax avenae subsp. Citrulli AAC00-1
Acidovorax citrulli
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter sp.
Acinetobacter sp. ADP1
Actinobacillus pleuropneumoniae
Actinobacillus succinogenes
Actinomadura madurae
Actinomadura melliaura
Actinomyces bovis
Actinomyces odontolyticus
Actinomycetales
Actinomycetospora chiangmaiensis
Actinoplanes
Actinoplanes atraurantiacus
Adeno-associated virus - 1
Adeno-associated virus - 2
Adeno-associated virus - 5
Adeno-associated virus - 7
Adeno-associated virus - 8
Adeno-associated virus 9
Adenovirus
Aequorea victoria
Aeromonas hydrophila
Aeropyrum pernix
African swine fever virus
Aggregatibacter actinomycetemcomitans
Agreia bicolorata
Agrobacterium fabrum
Agrobacterium radiobacter
Agrobacterium tumefaciens
Agrobacterium vitis
Agrococcus casei
Aichi virus 1
Akkermansia muciniphila
Albidiferax ferrireducens
Alcanivorax borkumensis
Algoriphagus sp. PR1
Alicyclobacillus acidocaldarius
Aliivibrio fischeri
Alkalilimnicola ehrlichii
Alkaliphilus metalliredigens
Alkaliphilus oremlandii
Alloiococcus otitis
Allokutzneria albata
Alphacoronavirus 1
Alphapapillomavirus
Alphapapillomavirus 5
Alphapapillomavirus 7
Alphapapillomavirus 9
Alteromonadales bacterium TW-7
Alteromonas macleodii
Anabaena sp.
Anabaena variabilis
Anaerococcus prevotii
Anaerocolumna xylanovorans
Anaeromyxobacter dehalogenans
Anaeromyxobacter dehalogenans 2CP-1
Anopheles gambiae
Aphodius variabilis
Aquifex aeolicus
Arabidopsis thaliana
Archaeoglobus fulgidus
Archaeoglobus profundus
Arenimonas oryziterrae
Aromatoleum aromaticum
Arthrobacter aurescens
Arthrobacter chlorophenolicus A6
Arthrobacter globiformis
Arthrobacter sp.
Arthrobacter sp. FB24
Aspergillus fumigatus
Aspergillus oryzae
Atopobium parvulum DSM 20469
Aurantimonas manganoxydans
Auraticoccus monumenti
Avian reovirus
Azorhizobium caulinodans
Azotobacter vinelandii

B


Bacillus anthracis
Bacillus cereus
Bacillus cereus group
Bacillus clausii
Bacillus cytotoxicus
Bacillus halodurans
Bacillus licheniformis
Bacillus licheniformis ATCC 14580
Bacillus megaterium
Bacillus phage phBC6A51
Bacillus selenitireducens
Bacillus sp. 7586-K
Bacillus sp. NRRL B-14911
Bacillus subtilis
Bacillus thuringiensis
Bacillus weihenstephanensis
Bacteriovorax sp. BAL6_X
Bacteroides caccae
Bacteroides capillosus ATCC 29799
Bacteroides eggerthii
Bacteroides fragilis
Bacteroides fragilis NCTC 9434
Bacteroides luti
Bacteroides ovatus
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bacteroides vulgatus
Bartonella bacilliformis
Bartonella henselae
Bdellovibrio bacteriovorus
Bermanella marisrubri
Betapapillomavirus 4
Beutenbergia cavernae
Bifidobacterium adolescentis
Bifidobacterium animalis
Bifidobacterium bombi
Bifidobacterium longum
Bifidobacterium reuteri
Bifidobacterium tsurumiense
Blastomyces dermatitidis
Blastopirellula marina
Bocaparvovirus primate1
Bordetella
Bordetella bronchiseptica
Bordetella parapertussis
Bordetella pertussis
Borrelia andersonii
Borrelia burgdorferi
Borrelia garinii
Bos indicus
Bos mutus
Bos taurus
Bovine papillomavirus
Brachybacterium
Brachybacterium faecium DSM 4810
Brachybacterium paraconglomeratum
Brachyspira murdochii
Bradyrhizobium japonicum
Bradyrhizobium sp. BTAi1
Brevibacterium antiquum
Brevibacterium linens
Brevibacterium mcbrellneri
Brucella abortus
Brucella melitensis
Bubalus bubalis
Buchnera aphidicola
Bundibugyo virus
Burkholderia
Burkholderia ambifaria
Burkholderia cenocepacia J2315
Burkholderia cepacia
Burkholderia graminis
Burkholderia mallei
Burkholderia multivorans
Burkholderia phage phi52237
Burkholderia phymatum
Burkholderia phytofirmans
Burkholderia pseudomallei
Burkholderia sp.
Burkholderia sp. 383
Burkholderia sp. NF100
Burkholderia thailandensis
Burkholderia vietnamiensis
Burkholderia xenovorans
Burkholderiales

C


Caenorhabditis elegans
Caldanaerobacter subterraneus
Caldicellulosiruptor saccharolyticus
Caldivirga maquilingensis
California encephalitis virus
Campylobacter concisus
Campylobacter curvus
Campylobacter fetus
Campylobacter jejuni
Campylobacter jejuni subsp. jejuni NCTC 11168
Campylobacter lari
Candida albicans
Candida glabrata
Candida verbasci
Candidatus Blochmannia floridanus
Candidatus Chloracidobacterium thermophilum B
Candidatus Koribacter versatilis
Candidatus Kuenenia stuttgartiensis
Candidatus Protochlamydia amoebophila
Candidatus Ruthia magnifica
Candidatus Solibacter usitatus
Capnocytophaga gingivalis
Capnocytophaga ochracea
Carboxydothermus hydrogenoformans
Carnobacterium maltaromaticum
Catenulispora acidiphila DSM 44928
Catharanthus roseus phytoplasma
Caudovirales
Caulobacter sp. K31
Caulobacter vibrioides
Cavia porcellus
Cellulomonas cellasea
Cellulomonas flavigena DSM 20109
Cellvibrio japonicus
Cenarchaeum symbiosum
Cephaloticoccus capnophilus
Cercopithecine herpesvirus 17
Chaetomium thermophilum
Chelativorans sp. BNC1
Chikungunya virus
Chitinophaga pinensis
Chlamydia muridarum
Chlamydia pneumoniae
Chlamydia trachomatis
Chlamydiales bacterium SCGC AG-110-P3
Chlamydomonas reinhardtii
Chlamydophila abortus
Chlamydophila caviae
Chlamydophila pneumoniae
Chlorella vulgaris
Chlorobaculum tepidum
Chlorobium ferrooxidans
Chlorobium limicola
Chlorobium phaeobacteroides
Chlorobium phaeovibrioides
Chlorobium tepidum
Chloroflexi bacterium RBG_13_51_36
Chloroflexus
Chloroflexus aggregans
Chloroflexus aurantiacus
Chromatocurvus halotolerans
Chromobacterium violaceum
Chromohalobacter salexigens
Citrobacter koseri
Clavibacter michiganensis
Clostridiales bacterium
Clostridium acetobutylicum
Clostridium beijerinckii
Clostridium cellulolyticum
Clostridium cellulovorans
Clostridium combesii
Clostridium difficile
Clostridium hiranonis
Clostridium hiranonis DSM 13275
Clostridium hylemonae TN-271
Clostridium kluyveri
Clostridium leptum
Clostridium novyi
Clostridium perfringens
Clostridium phage c-st
Clostridium phytofermentans
Clostridium ramosum
Clostridium scindens
Clostridium sporogenes ATCC 15579
Clostridium symbiosum
Clostridium tetani
Clostridium thermocellum
Coccidioides immitis
Coccidioides posadasii
Collinsella aerofaciens
Colwellia psychrerythraea
Comamonas testosteroni
Conexibacter woesei DSM 14684
Coprococcus eutactus
Corynebacterium diphtheriae
Corynebacterium efficiens
Corynebacterium glutamicum
Corynebacterium jeikeium
Corynebacterium tuberculostearicum
Cowpox virus
Coxiella burnetii
Coxsackievirus A10
Coxsackievirus A16
Coxsackievirus A2
Coxsackievirus A22
Coxsackievirus A24
Coxsackievirus A4
Coxsackievirus A5
Coxsackievirus A6
Coxsackievirus A8
Coxsackievirus A9
Coxsackievirus B1
Coxsackievirus B2
Coxsackievirus B3
Coxsackievirus B5
Coxsackievirus B6
Cryptococcus gattii VGI
Cryptococcus neoformans
Cryptosporidium parvum
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pinatubonensis
Cutibacterium granulosum
Cyanidioschyzon merolae
Cytomegalovirus
Cytophaga hutchinsonii

D


Danio rerio
Debaryomyces hansenii
Dechloromonas aromatica
Dehalococcoides mccartyi
Deinococcus geothermalis
Deinococcus radiodurans
Delta proteobacterium MLMS-1
Dengue virus
Dermabacter
Dermatophilus congolensis
Desulfitobacterium hafniense
Desulfobacter curvatus
Desulfobacterium autotrophicum
Desulfobulbus elongatus
Desulfohalobium retbaense DSM 5692
Desulfotalea psychrophila
Desulfotomaculum acetoxidans
Desulfotomaculum reducens
Desulfovibrio alaskensis
Desulfovibrio alaskensis G20
Desulfovibrio desulfuricans
Desulfovibrio piger ATCC 29098
Desulfovibrio vulgaris
Desulfuromonas acetoxidans
Dictyoglomus thermophilum
Dictyostelium discoideum
Dinoroseobacter shibae
Dokdonia donghaensis
Dorea formicigenerans
Drosophila melanogaster
Dyadobacter fermentans

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E


Eastern equine encephalitis virus
Echovirus 9 strain Barty
Echovirus E11
Echovirus E13
Echovirus E14
Echovirus E18 isolate NSW-V13A-2008-ECHO18
Echovirus E21
Echovirus E25
Echovirus E3
Echovirus E30
Echovirus E4
Echovirus E7
Edwardsiella ictaluri
Eggerthella
Eggerthella lenta
Ehrlichia canis
Ehrlichia chaffeensis
Ehrlichia ruminantium
Eleutherodactylus coqui
Emericella nidulans
Encephalitozoon cuniculi
Encephalomyocarditis virus
Enhygromyxa salina
Entamoeba histolytica
Enterobacteria phage CP-1639
Enterobacteria phage P1
Enterobacteria phage P22
Enterobacteria phage PsP3
Enterobacteria phage RB43
Enterobacteria phage lambda
Enterobacteriaceae
Enterococcus casseliflavus
Enterococcus faecalis
Enterococcus faecium
Enterocytozoon bieneusi
Enterovirus A71 strain Hau1
Enterovirus C
Enterovirus D68
Environmental genome shotgun sequencing of the Sargasso Sea
Epstein-Barr virus
Epulopiscium sp. N.t. morphotype B
Ereboglobus luteus
Eremothecium gossypii
Erwinia amylovora
Erwinia carotovora
Erwinia chrysanthemi
Erythrobacter litoralis
Escherichia coli
Escherichia coli O157:H7 str. EC4115
Escherichia fergusonii
Escherichia phage N4
Eubacterium eligens
Eubacterium rectale
Eubacterium siraeum DSM 15702
Eubacterium ventriosum
Exiguobacterium sibiricum

F


Faecalibacterium prausnitzii
Faecalibacterium prausnitzii M21/2
Ferroplasma acidarmanus
Fervidobacterium nodosum
Flavobacteria bacterium BBFL7
Flavobacteriales
Flavobacterium johnsoniae
Flavobacterium psychrophilum
Foot-and-mouth disease virus
Francisella philomiragia
Francisella tularensis
Frankia alni
Frankia sp. CcI3
Frankia sp. EAN1pec
Fulvimarina pelagi
Fundulus heteroclitus
Fusobacterium nucleatum
Fusobacterium varium

G


GB virus C
Galdieria sulphuraria
Gallid herpesvirus 2
Gallus gallus
Gemella haemolysans
Geobacillus
Geobacillus kaustophilus
Geobacillus kaustophilus HTA426
Geobacillus sp. C56-T3
Geobacillus sp. GHH01
Geobacillus sp. Y412MC52
Geobacillus sp. Y412MC61
Geobacillus stearothermophilus
Geobacillus thermodenitrificans
Geobacter daltonii
Geobacter lovleyi SZ
Geobacter metallireducens
Geobacter sulfurreducens
Geobacter uraniireducens
Geodermatophilus obscurus
Giardia intestinalis
Gibberella zeae
Global Ocean Survey
Gloeobacter violaceus
Gluconacetobacter diazotrophicus
Gluconobacter oxydans
Glycine max
Gordonia bronchialis
Gracilaria tenuistipitata
Gramella forsetii
Granulibacter bethesdensis
Granulosicoccus antarcticus

H


H1N1 subtype
H3N2 subtype
HIV-1 M:B
HIV-1 O_ANT70
HIV-2 subtype A
Haemophilus ducreyi
Haemophilus influenzae
Hahella chejuensis
Haliangium ochraceum
Haloarcula marismortui
Halobacteriovorax marinus
Halobacterium salinarum
Halobacterium sp.
Haloferax volcanii
Halogeometricum borinquense
Halomicrobium mukohataei
Haloquadratum walsbyi
Halorhabdus utahensis
Halorhodospira halophila
Halorubrum lacusprofundi
Haloterrigena turkmenica
Halothermothrix orenii
Helicobacter acinonychis
Helicobacter hepaticus
Helicobacter pylori
Heliobacterium modesticaldum
Hepatitis B virus
Hepatitis C virus
Hepatitis C virus genotype 1
Hepatitis E virus
Hepatovirus A
Herminiimonas arsenicoxydans
Herpetosiphon aurantiacus
Histophilus somni
Histoplasma mississippiense (nom. inval.)
Hoeflea phototrophica
Homo sapiens
Hordeum vulgare
Human Endogenous Retrovirus IDDMK1,2-22
Human adenovirus 41
Human adenovirus C
Human alphaherpesvirus 2
Human astrovirus
Human betaherpesvirus 5
Human betaherpesvirus 6A
Human betaherpesvirus 6B
Human betaherpesvirus 7
Human bocavirus 2c PK
Human bocavirus 3
Human bocavirus 4 NI
Human coronavirus 229E
Human coronavirus HKU1
Human coronavirus NL63
Human coronavirus OC43
Human coxsackievirus B4
Human gammaherpesvirus 8
Human herpesvirus 1
Human herpesvirus 2
Human herpesvirus 3
Human herpesvirus 4
Human herpesvirus 5
Human herpesvirus 6A
Human herpesvirus 7
Human herpesvirus 8
Human immunodeficiency virus 1
Human mastadenovirus A
Human mastadenovirus B
Human mastadenovirus C
Human mastadenovirus D
Human mastadenovirus F
Human metapneumovirus
Human orthopneumovirus
Human papillomavirus
Human papillomavirus 9
Human papillomavirus type 11
Human papillomavirus type 16
Human papillomavirus type 18
Human papillomavirus type 33
Human papillomavirus type 34
Human papillomavirus type 5
Human papillomavirus type 6
Human papillomavirus type 6b
Human papillomavirus type 8
Human parainfluenza virus 4a
Human parechovirus 1
Human parechovirus 6
Human picobirnavirus
Human poliovirus 2
Human polyomavirus 1
Human respiratory syncytial virus B
Human respirovirus 1
Human respirovirus 3
Human rhinovirus A1
Human rotavirus C
Human rubulavirus 2
Humibacillus sp. DSM 29435
Hungatella hathewayi
Hyphomonas neptunium ATCC 15444

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I


Idiomarina baltica
Idiomarina loihiensis
Influenza A virus
Influenza B virus (B/Lee/1940)
Influenza C virus (C/Ann Arbor/1/50)
Intrasporangiaceae bacterium URHB0013
Isoptericola variabilis

J


JC polyomavirus
Jannaschia sp. CCS1
Jonesia denitrificans

K


Kineococcus radiotolerans
Kineosphaera limosa
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella pneumoniae 342
Kluyveromyces lactis
Kocuria
Kocuria varians
Kribbella flavida
Kytococcus sedentarius

L


Labrenzia aggregata
Lachancea thermotolerans
Lactobacillales
Lactobacillus acidophilus
Lactobacillus brevis
Lactobacillus casei
Lactobacillus crispatus
Lactobacillus delbrueckii
Lactobacillus gasseri
Lactobacillus johnsonii
Lactobacillus phage phiadh
Lactobacillus plantarum
Lactobacillus reuteri
Lactobacillus sakei
Lactobacillus salivarius
Lactobacillus salivarius subsp. Salivarius UCC118
Lactococcus lactis
Lactococcus phage bIL310
Lawsonia intracellularis
Leeuwenhoekiella blandensis
Legionella brunensis
Legionella pneumophila
Leifsonia sp. Leaf325
Leifsonia xyli
Leishmania donovani
Leishmania major
Leishmania mexicana
Leptospira borgpetersenii
Leptospira interrogans
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Leptotrichia buccalis
Leuconostoc mesenteroides
Leucoraja erinacea
Listeria innocua
Listeria monocytogenes
Listeria phage A118
Lodderomyces elongisporus
Lomentospora prolificans
Luciola mingrelica
Lymphocryptovirus
Lysobacter tolerans

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M


Macaca mulatta
Macaca mulatta polyomavirus 1
Macacine herpesvirus 5
Magnaporthe grisea
Magnetococcus marinus
Magnetospirillum magneticum
Magnetospirillum magnetotacticum
Mamastrovirus 1
Mamastrovirus 3
Mannheimia haemolytica
Mannheimia succiniciproducens
Marburg marburgvirus
Maricaulis maris
Marine bacterium 105
Marine gamma proteobacterium HTCC2143
Marinobacter aquaeolei
Marinobacter hydrocarbonoclasticus
Marinobacter sp. ELB17
Mariprofundus ferrooxydans
Measles morbillivirus
Measles virus
Meiothermus ruber
Mesorhizobium chacoense
Mesorhizobium loti
Metallosphaera sedula
Metapneumovirus hominis
Methanobrevibacter smithii
Methanocaldococcus jannaschii
Methanocella paludicola
Methanococcoides burtonii
Methanococcus aeolicus
Methanococcus jannaschii
Methanococcus maripaludis
Methanococcus maripaludis X1
Methanococcus vannielii
Methanococcus voltae
Methanocorpusculum labreanum
Methanoculleus marisnigri
Methanohalophilus mahii
Methanopyrus kandleri
Methanosaeta thermophila
Methanosarcina acetivorans
Methanosarcina barkeri
Methanosarcina mazei
Methanospirillum hungatei
Methanothermobacter thermautotrophicus
Methanothermococcus thermolithotrophicus
Methylibium petroleiphilum
Methylobacillus flagellatus
Methylobacterium extorquens
Methylobacterium radiotolerans
Methylobacterium sp. 4-46
Methylococcus capsulatus
Meyerozyma guilliermondii
Micrococcus luteus
Micrococcus sp. 28
Microlunatus phosphovorus
Micromonospora avicenniae
Micromonospora chersina
Micromonospora echinospora
Micromonospora peucetia
Micromonospora viridifaciens
Microscilla marina
Microscilla sp. PRE1
Middle East respiratory syndrome coronavirus
Mobilicoccus massiliensis
Monkeypox virus
Moorella thermoacetica
Mumps virus
Murine coronavirus
Mus musculus
Mycobacterium avium
Mycobacterium bovis
Mycobacterium flavescens
Mycobacterium gordonae
Mycobacterium leprae
Mycobacterium marinum M
Mycobacterium smegmatis
Mycobacterium sp.
Mycobacterium sp. KMS
Mycobacterium sp. MCS
Mycobacterium tuberculosis
Mycobacterium ulcerans
Mycobacterium vanbaalenii
Mycoplasma agalactiae
Mycoplasma genitalium
Mycoplasma penetrans
Mycoplasma pneumoniae
Mycoplasma synoviae
Mycoplasmoides pneumoniae
Myxococcus xanthus

N


Nakamurella multipartita
Nanoarchaeum equitans
Natronomonas pharaonis
Neisseria gonorrhoeae
Neisseria meningitidis
Neisseria meningitidis FAM18
Neisseria sp. Marseille-Q6792
Neosartorya fischeri
Neptuniibacter caesariensis
Nicotiana tabacum
Nitrobacter hamburgensis
Nitrobacter sp. Nb-311A
Nitrobacter winogradskyi
Nitrococcus mobilis
Nitrosococcus oceani
Nitrosomonas europaea
Nitrosomonas eutropha
Nitrosospira multiformis
Nocardia farcinica
Nocardioides sp. JS614
Norovirus GI/Hu/JP/2007/GI.P3_GI.3/Shimizu/KK2866
Norovirus GII
Norwalk virus
Nostoc punctiforme
Nostoc sp.
Nostoc sp. PCC 7120
Nostocaceae
Novosphingobium aromaticivorans

O


Oceanicola batsensis
Oceanicola granulosus
Oceanobacillus iheyensis
Ochrobactrum anthropi
Oenococcus oeni
Okibacterium fritillariae
Oleispira antarctica
Onyong-nyong virus
Orthoflavivirus denguei
Orthoflavivirus japonicum
Orthopneumovirus bovis
Orthorubulavirus hominis
Oryza sativa
Ovis aries

P


Paenibacillus
Paenibacillus sp. JDR-2
Parabacteroides distasonis
Parabacteroides merdae
Parachlamydia acanthamoebae
Paracoccus denitrificans
Paramecium bursaria Chlorella virus 1
Parechovirus A
Parvimonas micra
Parvularcula bermudensis
Pasteurella multocida
Pectobacterium atrosepticum
Pectobacterium carotovorum
Pediococcus pentosaceus
Pedobacter heparinus
Pelobacter carbinolicus
Pelobacter propionicus
Pelodictyon phaeoclathratiforme
Pelotomaculum thermopropionicum
Peptostreptococcus anaerobius
Photinus pyralis
Photobacterium profundum
Photobacterium sp. SKA34
Photorhabdus luminescens
Pichia pastoris
Pichia stipitis
Picrophilus torridus
Pirellula sp.
Planctomyces limnophilus
Planctomyces maris
Plantibacter sp. VKM Ac-1784
Plasmodium berghei
Plasmodium falciparum
Plethodon cinereus
Pneumocystis carinii
Pneumocystis jirovecii
Pneumocystis murina
Polaribacter irgensii
Polaromonas naphthalenivorans
Polaromonas sp. JS666
Polynucleobacter necessarius
Pontellina plumata
Porphyromonas gingivalis
Potyvirus
Prevotella copri
Prevotella denticola
Prevotella melaninogenica
Primate bocavirus 1
Prochlorococcus marinus
Propionibacterium acnes
Proteus mirabilis
Proteus vulgaris
Pseudoalteromonas atlantica
Pseudoalteromonas haloplanktis
Pseudoalteromonas tunicata D2
Pseudomonadota
Pseudomonas
Pseudomonas aeruginosa
Pseudomonas aeruginosa group
Pseudomonas entomophila
Pseudomonas fluorescens
Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens PfO-1
Pseudomonas phage phiKZ
Pseudomonas protegens Pf-5
Pseudomonas putida
Pseudomonas savastanoi
Pseudomonas syringae
Pseudomonas syringae group genomosp. 3
Pseudovibrio sp. JE062
Pseudoxanthomonas
Psychrobacter arcticus
Psychrobacter cryohalolentis
Psychrobacter sp.
Psychroflexus torquis
Psychromonas aquimarina
Pyrobaculum aerophilum
Pyrococcus abyssi
Pyrococcus furiosus
Pyrococcus horikoshii

R


Rabies lyssavirus
Ralstonia metallidurans CH34
Ralstonia pickettii
Ralstonia solanacearum
Rattus norvegicus
Recombinant
Reinekea blandensis
Renibacterium salmoninarum ATCC 33209
Rhinovirus A
Rhinovirus B
Rhinovirus C
Rhizobium etli
Rhizobium leguminosarum
Rhizopus delemar
Rhodobacter capsulatus
Rhodobacter sphaeroides
Rhodobacteraceae bacterium HTCC2150
Rhodobacterales
Rhodococcus equi
Rhodococcus jostii
Rhodococcus opacus
Rhodococcus opacus PD630
Rhodopirellula baltica
Rhodopseudomonas palustris
Rhodospirillum rubrum
Rickettsia conorii
Rickettsia sibirica
Rickettsia typhi
Robiginitalea biformata
Roseburia intestinalis
Roseiflexus castenholzii
Roseiflexus sp. RS-1
Roseobacter
Roseobacter denitrificans
Roseobacter sp. MED193
Roseolovirus humanbeta6b
Roseovarius
Roseovarius nubinhibens
Roseovarius sp. 217
Rotavirus
Rotavirus A
Rothia mucilaginosa
Rubella virus
Rubrobacter xylanophilus
Ruegeria pomeroyi
Ruegeria sp. TM1040
Ruminococcus albus
Ruminococcus gnavus
Ruminococcus obeum

S


Saccharomonospora viridis
Saccharomyces bayanus
Saccharomyces castellii
Saccharomyces cerevisiae
Saccharomyces cerevisiae S288c
Saccharomyces kluyveri
Saccharomyces kudriavzevii
Saccharomyces mikatae
Saccharomyces paradoxus
Saccharophagus degradans
Saccharopolyspora erythraea
Saccharothrix espanaensis
Sagittula stellata
Salinibacter ruber
Salinispora arenicola
Salinispora tropica CNB-440
Salivirus NG-J1
Salmo salar
Salmonella choleraesuis
Salmonella enterica
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella typhimurium
Salmonella typhimurium LT2
Sandaracinus amylolyticus
Sanguibacter keddieii
Sapporo virus
Sapporo virus isolate Hu/GV/0003/Sollentuna/2016/SWE
Scedosporium apiospermum
Scheffersomyces stipitis
Schistosoma japonicum
Schistosoma japonicum and Saccharomyces cerevisiae (synthetic)
Schizosaccharomyces pombe
Sclerotinia sclerotiorum
Sebaldella termitidis
Sediminihabitans luteus
Selenomonas ruminantium
Semliki Forest virus
Serratia proteamaculans
Severe acute respiratory syndrome coronavirus 2
Severe acute respiratory syndrome-related coronavirus
Shewanella amazonensis
Shewanella baltica
Shewanella denitrificans
Shewanella denitrificans os-217
Shewanella frigidimarina
Shewanella loihica
Shewanella oneidensis
Shewanella pealeana
Shewanella putrefaciens
Shewanella sp. ANA-3
Shewanella sp. MR-4
Shewanella sp. PV-4
Shewanella sp. W3-18-1
Shewanella woodyi
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Silanimonas lenta
Silicibacter pomeroyi
Silicibacter pomeroyi DSS-3
Silicibacter sp. TM1040
Simian virus 40
Simplexvirus
Sindbis virus
Sinorhizobium fredii
Sinorhizobium medicae
Sinorhizobium meliloti
Slackia heliotrinireducens
Small anellovirus
Solanum bulbocastanum
Solanum lycopersicum
Solanum tuberosum
Sphaerobacter thermophilus
Sphingomonas paucimobilis
Sphingomonas sp.
Sphingomonas sp. SKA58
Sphingopyxis alaskensis
Spirosoma linguale
Squalus acanthias
Stackebrandtia nassauensis
Staphylococcus aureus
Staphylococcus aureus subsp. aureus N315
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus phage G1
Staphylococcus saprophyticus
Staphylothermus marinus F1
Stigmatella aurantiaca
Streptoalloteichus hindustanus
Streptobacillus moniliformis
Streptococcus
Streptococcus acidominimus
Streptococcus agalactiae
Streptococcus gallolyticus
Streptococcus mitis
Streptococcus mutans
Streptococcus pneumoniae
Streptococcus pyogenes
Streptococcus pyogenes SF370
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus suis
Streptococcus thermophilus
Streptomyces
Streptomyces albus
Streptomyces ambofaciens
Streptomyces atroolivaceus
Streptomyces avermitilis
Streptomyces carzinostaticus
Streptomyces clavuligerus
Streptomyces coelicolor
Streptomyces flavoviridis
Streptomyces globisporus
Streptomyces griseochromogenes
Streptomyces griseoruber
Streptomyces griseus
Streptomyces laurentii
Streptomyces lividans
Streptomyces nanchangensis
Streptomyces platensis
Streptomyces verticillus
Streptosporangium roseum
Strongylocentrotus purpuratus
Subtercola sp. Z020
Sudan ebolavirus
Sulfitobacter sp. EE-36
Sulfitobacter sp. NAS-14.1
Sulfolobus acidocaldarius
Sulfolobus solfataricus
Sulfolobus tokodaii
Sulfurimonas denitrificans
Sulfurospirillum deleyianum
Symbiobacterium thermophilum
Synechococcus elongatus
Synechococcus sp.
Synechococcus sp. CC9902
Synechococcus sp. JA-2-3B'a(2-13)
Synechococcus sp. PCC 7002
Synechococcus sp. WH 8102
Synechocystis sp.
Synechocystis sp. (strain PCC 6803 / Kazusa)
Synechocystis sp. PCC 6803
Syntrophobacter fumaroxidans
Syntrophomonas wolfei
Syntrophus aciditrophicus

T


Tetraodon nigroviridis
Thaumarchaeota archaeon SCGC AB-539-E09
Thermanaerovibrio acidaminovorans
Thermoanaerobacter brockii
Thermoanaerobacter ethanolicus
Thermoanaerobacter pseudethanolicus
Thermoanaerobacter sp. X514
Thermoanaerobacterium thermosulfurigenes
Thermobifida fusca
Thermobispora bispora
Thermococcus kodakarensis
Thermococcus litoralis
Thermomonas haemolytica
Thermomonospora curvata
Thermoplasma acidophilum
Thermoplasma volcanium
Thermoplasmatales archaeon SCGC AB-539-C06
Thermoplasmatales archaeon SCGC AB-539-N05
Thermoplasmatales archaeon SCGC AB-540-F2
Thermoprotei
Thermosynechococcus elongatus
Thermotoga lettingae TMO
Thermotoga maritima
Thermotoga petrophila
Thermotogales
Thermus thermophilus
Thiobacillus denitrificans
Thiomicrospira crunogena
Tick-borne encephalitis virus
Tioman virus
Tobacco etch virus
Torque teno midi virus 1
Torque teno mini virus 1
Torque teno virus 3
Torque teno virus 5
Torque teno virus 7
Torque teno virus 8
Toxoplasma gondii
Toxoplasma gondii GT1
Transposon Tn4551
Treponema denticola
Treponema denticola ATCC 35405
Treponema pallidum
Trichodesmium erythraeum
Trichomonas vaginalis
Triticum aestivum
Trueperella bernardiae
Trypanosoma brucei
Trypanosoma cruzi
Tsukamurella paurometabola

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U


Unknown
Ureaplasma parvum

V


Vaccinia virus WR
Vallicoccus soli
Vanderwaltozyma polyspora
Veillonella parvula
Verminephrobacter eiseniae
Vesicular stomatitis Indiana virus
Vibrio cholerae
Vibrio cholerae (unspecified strain)
Vibrio fischeri
Vibrio natriegens
Vibrio parahaemolyticus
Vibrio phage VHML
Vibrio vulnificus
Vibrionales bacterium SWAT-3
Viruses

W


Wenzhouxiangella sediminis
West Nile virus
Wolbachia sp.
Wolinella succinogenes

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X


Xanthobacter autotrophicus
Xanthomonas axonopodis
Xanthomonas campestris
Xanthomonas citri
Xanthomonas oryzae
Xanthomonas translucens
Xenopus laevis
Xenopus tropicalis
Xenorhabdus bovienii SS-2004
Xenorhabdus nematophila ATCC 19061
Xylanimonas cellulosilytica DSM 15894
Xylella fastidiosa

Y


Yellow fever virus
Yersinia bercovieri
Yersinia enterocolitica
Yersinia enterocolitica W22703
Yersinia intermedia
Yersinia mollaretii
Yersinia pestis
Yersinia pestis KIM D27
Yersinia pseudotuberculosis

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Z


Zaire ebolavirus
Zika virus
Zymomonas mobilis

Archaea         Bacteria         Eukaryota         Virus         Other        

Archaea

Acidianus hospitalis W1
Aeropyrum pernix
Archaeoglobus fulgidus
Archaeoglobus profundus
Caldivirga maquilingensis
Cenarchaeum symbiosum
Ferroplasma acidarmanus
Haloarcula marismortui
Halobacterium salinarum
Halobacterium sp.
Haloferax volcanii
Halogeometricum borinquense
Halomicrobium mukohataei
Haloquadratum walsbyi
Halorhabdus utahensis
Halorubrum lacusprofundi
Haloterrigena turkmenica
Metallosphaera sedula
Methanobrevibacter smithii
Methanocaldococcus jannaschii
Methanocella paludicola
Methanococcoides burtonii
Methanococcus aeolicus
Methanococcus jannaschii
Methanococcus maripaludis
Methanococcus maripaludis X1
Methanococcus vannielii
Methanococcus voltae
Methanocorpusculum labreanum
Methanoculleus marisnigri
Methanohalophilus mahii
Methanopyrus kandleri
Methanosaeta thermophila
Methanosarcina acetivorans
Methanosarcina barkeri
Methanosarcina mazei
Methanospirillum hungatei
Methanothermobacter thermautotrophicus
Methanothermococcus thermolithotrophicus
Nanoarchaeum equitans
Natronomonas pharaonis
Picrophilus torridus
Pyrobaculum aerophilum
Pyrococcus abyssi
Pyrococcus furiosus
Pyrococcus horikoshii
Staphylothermus marinus F1
Sulfolobus acidocaldarius
Sulfolobus solfataricus
Sulfolobus tokodaii
Thaumarchaeota archaeon SCGC AB-539-E09
Thermococcus kodakarensis
Thermococcus litoralis
Thermoplasma acidophilum
Thermoplasma volcanium
Thermoplasmatales archaeon SCGC AB-539-C06
Thermoplasmatales archaeon SCGC AB-539-N05
Thermoplasmatales archaeon SCGC AB-540-F2
Thermoprotei
uncultured archaeon GZfos37B2
uncultured archaeon GZfos9E5

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Bacteria


Acholeplasma laidlawii
Acidimicrobium ferrooxidans
Acidithiobacillus ferrooxidans
Acidobacterium capsulatum
Acidothermus cellulolyticus
Acidovorax avenae subsp. Citrulli AAC00-1
Acidovorax citrulli
Acinetobacter baumannii
Acinetobacter calcoaceticus
Acinetobacter sp.
Acinetobacter sp. ADP1
Actinobacillus pleuropneumoniae
Actinobacillus succinogenes
Actinomadura madurae
Actinomadura melliaura
Actinomyces bovis
Actinomyces odontolyticus
Actinomycetales
Actinomycetospora chiangmaiensis
Actinoplanes
Actinoplanes atraurantiacus
Aeromonas hydrophila
Aggregatibacter actinomycetemcomitans
Agreia bicolorata
Agrobacterium fabrum
Agrobacterium radiobacter
Agrobacterium tumefaciens
Agrobacterium vitis
Agrococcus casei
Akkermansia muciniphila
Albidiferax ferrireducens
Alcanivorax borkumensis
Algoriphagus sp. PR1
Alicyclobacillus acidocaldarius
Aliivibrio fischeri
Alkalilimnicola ehrlichii
Alkaliphilus metalliredigens
Alkaliphilus oremlandii
Alloiococcus otitis
Allokutzneria albata
Alteromonadales bacterium TW-7
Alteromonas macleodii
Anabaena sp.
Anabaena variabilis
Anaerococcus prevotii
Anaerocolumna xylanovorans
Anaeromyxobacter dehalogenans
Anaeromyxobacter dehalogenans 2CP-1
Aquifex aeolicus
Arenimonas oryziterrae
Aromatoleum aromaticum
Arthrobacter aurescens
Arthrobacter chlorophenolicus A6
Arthrobacter globiformis
Arthrobacter sp.
Arthrobacter sp. FB24
Atopobium parvulum DSM 20469
Aurantimonas manganoxydans
Auraticoccus monumenti
Azorhizobium caulinodans
Azotobacter vinelandii
Bacillus anthracis
Bacillus cereus
Bacillus cereus group
Bacillus clausii
Bacillus cytotoxicus
Bacillus halodurans
Bacillus licheniformis
Bacillus licheniformis ATCC 14580
Bacillus megaterium
Bacillus selenitireducens
Bacillus sp. 7586-K
Bacillus sp. NRRL B-14911
Bacillus subtilis
Bacillus thuringiensis
Bacillus weihenstephanensis
Bacteriovorax sp. BAL6_X
Bacteroides caccae
Bacteroides capillosus ATCC 29799
Bacteroides eggerthii
Bacteroides fragilis
Bacteroides fragilis NCTC 9434
Bacteroides luti
Bacteroides ovatus
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bacteroides vulgatus
Bartonella bacilliformis
Bartonella henselae
Bdellovibrio bacteriovorus
Bermanella marisrubri
Beutenbergia cavernae
Bifidobacterium adolescentis
Bifidobacterium animalis
Bifidobacterium bombi
Bifidobacterium longum
Bifidobacterium reuteri
Bifidobacterium tsurumiense
Blastopirellula marina
Bordetella
Bordetella bronchiseptica
Bordetella parapertussis
Bordetella pertussis
Borrelia andersonii
Borrelia burgdorferi
Borrelia garinii
Brachybacterium
Brachybacterium faecium DSM 4810
Brachybacterium paraconglomeratum
Brachyspira murdochii
Bradyrhizobium japonicum
Bradyrhizobium sp. BTAi1
Brevibacterium antiquum
Brevibacterium linens
Brevibacterium mcbrellneri
Brucella abortus
Brucella melitensis
Buchnera aphidicola
Burkholderia
Burkholderia ambifaria
Burkholderia cenocepacia J2315
Burkholderia cepacia
Burkholderia graminis
Burkholderia mallei
Burkholderia multivorans
Burkholderia phymatum
Burkholderia phytofirmans
Burkholderia pseudomallei
Burkholderia sp.
Burkholderia sp. 383
Burkholderia sp. NF100
Burkholderia thailandensis
Burkholderia vietnamiensis
Burkholderia xenovorans
Burkholderiales
Caldanaerobacter subterraneus
Caldicellulosiruptor saccharolyticus
Campylobacter concisus
Campylobacter curvus
Campylobacter fetus
Campylobacter jejuni
Campylobacter jejuni subsp. jejuni NCTC 11168
Campylobacter lari
Candidatus Blochmannia floridanus
Candidatus Chloracidobacterium thermophilum B
Candidatus Koribacter versatilis
Candidatus Kuenenia stuttgartiensis
Candidatus Protochlamydia amoebophila
Candidatus Ruthia magnifica
Candidatus Solibacter usitatus
Capnocytophaga gingivalis
Capnocytophaga ochracea
Carboxydothermus hydrogenoformans
Carnobacterium maltaromaticum
Catenulispora acidiphila DSM 44928
Catharanthus roseus phytoplasma
Caulobacter sp. K31
Caulobacter vibrioides
Cellulomonas cellasea
Cellulomonas flavigena DSM 20109
Cellvibrio japonicus
Cephaloticoccus capnophilus
Chelativorans sp. BNC1
Chitinophaga pinensis
Chlamydia muridarum
Chlamydia pneumoniae
Chlamydia trachomatis
Chlamydiales bacterium SCGC AG-110-P3
Chlamydophila abortus
Chlamydophila caviae
Chlamydophila pneumoniae
Chlorobaculum tepidum
Chlorobium ferrooxidans
Chlorobium limicola
Chlorobium phaeobacteroides
Chlorobium phaeovibrioides
Chlorobium tepidum
Chloroflexi bacterium RBG_13_51_36
Chloroflexus
Chloroflexus aggregans
Chloroflexus aurantiacus
Chromatocurvus halotolerans
Chromobacterium violaceum
Chromohalobacter salexigens
Citrobacter koseri
Clavibacter michiganensis
Clostridiales bacterium
Clostridium acetobutylicum
Clostridium beijerinckii
Clostridium cellulolyticum
Clostridium cellulovorans
Clostridium combesii
Clostridium difficile
Clostridium hiranonis
Clostridium hiranonis DSM 13275
Clostridium hylemonae TN-271
Clostridium kluyveri
Clostridium leptum
Clostridium novyi
Clostridium perfringens
Clostridium phytofermentans
Clostridium ramosum
Clostridium scindens
Clostridium sporogenes ATCC 15579
Clostridium symbiosum
Clostridium tetani
Clostridium thermocellum
Collinsella aerofaciens
Colwellia psychrerythraea
Comamonas testosteroni
Conexibacter woesei DSM 14684
Coprococcus eutactus
Corynebacterium diphtheriae
Corynebacterium efficiens
Corynebacterium glutamicum
Corynebacterium jeikeium
Corynebacterium tuberculostearicum
Coxiella burnetii
Cupriavidus metallidurans
Cupriavidus necator
Cupriavidus pinatubonensis
Cutibacterium granulosum
Cytophaga hutchinsonii
Dechloromonas aromatica
Dehalococcoides mccartyi
Deinococcus geothermalis
Deinococcus radiodurans
Delta proteobacterium MLMS-1
Dermabacter
Dermatophilus congolensis
Desulfitobacterium hafniense
Desulfobacter curvatus
Desulfobacterium autotrophicum
Desulfobulbus elongatus
Desulfohalobium retbaense DSM 5692
Desulfotalea psychrophila
Desulfotomaculum acetoxidans
Desulfotomaculum reducens
Desulfovibrio alaskensis
Desulfovibrio alaskensis G20
Desulfovibrio desulfuricans
Desulfovibrio piger ATCC 29098
Desulfovibrio vulgaris
Desulfuromonas acetoxidans
Dictyoglomus thermophilum
Dinoroseobacter shibae
Dokdonia donghaensis
Dorea formicigenerans
Dyadobacter fermentans
Edwardsiella ictaluri
Eggerthella
Eggerthella lenta
Ehrlichia canis
Ehrlichia chaffeensis
Ehrlichia ruminantium
Enhygromyxa salina
Enterobacteriaceae
Enterococcus casseliflavus
Enterococcus faecalis
Enterococcus faecium
Epulopiscium sp. N.t. morphotype B
Ereboglobus luteus
Erwinia amylovora
Erwinia carotovora
Erwinia chrysanthemi
Erythrobacter litoralis
Escherichia coli
Escherichia coli O157:H7 str. EC4115
Escherichia fergusonii
Eubacterium eligens
Eubacterium rectale
Eubacterium siraeum DSM 15702
Eubacterium ventriosum
Exiguobacterium sibiricum
Faecalibacterium prausnitzii
Faecalibacterium prausnitzii M21/2
Fervidobacterium nodosum
Flavobacteria bacterium BBFL7
Flavobacteriales
Flavobacterium johnsoniae
Flavobacterium psychrophilum
Francisella philomiragia
Francisella tularensis
Frankia alni
Frankia sp. CcI3
Frankia sp. EAN1pec
Fulvimarina pelagi
Fusobacterium nucleatum
Fusobacterium varium
Gemella haemolysans
Geobacillus
Geobacillus kaustophilus
Geobacillus kaustophilus HTA426
Geobacillus sp. C56-T3
Geobacillus sp. GHH01
Geobacillus sp. Y412MC52
Geobacillus sp. Y412MC61
Geobacillus stearothermophilus
Geobacillus thermodenitrificans
Geobacter daltonii
Geobacter lovleyi SZ
Geobacter metallireducens
Geobacter sulfurreducens
Geobacter uraniireducens
Geodermatophilus obscurus
Gloeobacter violaceus
Gluconacetobacter diazotrophicus
Gluconobacter oxydans
Gordonia bronchialis
Gramella forsetii
Granulibacter bethesdensis
Granulosicoccus antarcticus
Haemophilus ducreyi
Haemophilus influenzae
Hahella chejuensis
Haliangium ochraceum
Halobacteriovorax marinus
Halorhodospira halophila
Halothermothrix orenii
Helicobacter acinonychis
Helicobacter hepaticus
Helicobacter pylori
Heliobacterium modesticaldum
Herminiimonas arsenicoxydans
Herpetosiphon aurantiacus
Histophilus somni
Hoeflea phototrophica
Humibacillus sp. DSM 29435
Hungatella hathewayi
Hyphomonas neptunium ATCC 15444
Idiomarina baltica
Idiomarina loihiensis
Intrasporangiaceae bacterium URHB0013
Isoptericola variabilis
Jannaschia sp. CCS1
Jonesia denitrificans
Kineococcus radiotolerans
Kineosphaera limosa
Klebsiella oxytoca
Klebsiella pneumoniae
Klebsiella pneumoniae 342
Kocuria
Kocuria varians
Kribbella flavida
Kytococcus sedentarius
Labrenzia aggregata
Lactobacillales
Lactobacillus acidophilus
Lactobacillus brevis
Lactobacillus casei
Lactobacillus crispatus
Lactobacillus delbrueckii
Lactobacillus gasseri
Lactobacillus johnsonii
Lactobacillus plantarum
Lactobacillus reuteri
Lactobacillus sakei
Lactobacillus salivarius
Lactobacillus salivarius subsp. Salivarius UCC118
Lactococcus lactis
Lawsonia intracellularis
Leeuwenhoekiella blandensis
Legionella brunensis
Legionella pneumophila
Leifsonia sp. Leaf325
Leifsonia xyli
Leptospira borgpetersenii
Leptospira interrogans
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Leptotrichia buccalis
Leuconostoc mesenteroides
Listeria innocua
Listeria monocytogenes
Lysobacter tolerans
Magnetococcus marinus
Magnetospirillum magneticum
Magnetospirillum magnetotacticum
Mannheimia haemolytica
Mannheimia succiniciproducens
Maricaulis maris
Marine bacterium 105
Marine gamma proteobacterium HTCC2143
Marinobacter aquaeolei
Marinobacter hydrocarbonoclasticus
Marinobacter sp. ELB17
Mariprofundus ferrooxydans
Meiothermus ruber
Mesorhizobium chacoense
Mesorhizobium loti
Metapneumovirus hominis
Methylibium petroleiphilum
Methylobacillus flagellatus
Methylobacterium extorquens
Methylobacterium radiotolerans
Methylobacterium sp. 4-46
Methylococcus capsulatus
Micrococcus luteus
Micrococcus sp. 28
Microlunatus phosphovorus
Micromonospora avicenniae
Micromonospora chersina
Micromonospora echinospora
Micromonospora peucetia
Micromonospora viridifaciens
Microscilla marina
Microscilla sp. PRE1
Mobilicoccus massiliensis
Moorella thermoacetica
Mycobacterium avium
Mycobacterium bovis
Mycobacterium flavescens
Mycobacterium gordonae
Mycobacterium leprae
Mycobacterium marinum M
Mycobacterium smegmatis
Mycobacterium sp.
Mycobacterium sp. KMS
Mycobacterium sp. MCS
Mycobacterium tuberculosis
Mycobacterium ulcerans
Mycobacterium vanbaalenii
Mycoplasma agalactiae
Mycoplasma genitalium
Mycoplasma penetrans
Mycoplasma pneumoniae
Mycoplasma synoviae
Mycoplasmoides pneumoniae
Myxococcus xanthus
Nakamurella multipartita
Neisseria gonorrhoeae
Neisseria meningitidis
Neisseria meningitidis FAM18
Neisseria sp. Marseille-Q6792
Neptuniibacter caesariensis
Nitrobacter hamburgensis
Nitrobacter sp. Nb-311A
Nitrobacter winogradskyi
Nitrococcus mobilis
Nitrosococcus oceani
Nitrosomonas europaea
Nitrosomonas eutropha
Nitrosospira multiformis
Nocardia farcinica
Nocardioides sp. JS614
Nostoc punctiforme
Nostoc sp.
Nostoc sp. PCC 7120
Nostocaceae
Novosphingobium aromaticivorans
Oceanicola batsensis
Oceanicola granulosus
Oceanobacillus iheyensis
Ochrobactrum anthropi
Oenococcus oeni
Okibacterium fritillariae
Oleispira antarctica
Paenibacillus
Paenibacillus sp. JDR-2
Parabacteroides distasonis
Parabacteroides merdae
Parachlamydia acanthamoebae
Paracoccus denitrificans
Parvimonas micra
Parvularcula bermudensis
Pasteurella multocida
Pectobacterium atrosepticum
Pectobacterium carotovorum
Pediococcus pentosaceus
Pedobacter heparinus
Pelobacter carbinolicus
Pelobacter propionicus
Pelodictyon phaeoclathratiforme
Pelotomaculum thermopropionicum
Peptostreptococcus anaerobius
Photobacterium profundum
Photobacterium sp. SKA34
Photorhabdus luminescens
Pirellula sp.
Planctomyces limnophilus
Planctomyces maris
Plantibacter sp. VKM Ac-1784
Polaribacter irgensii
Polaromonas naphthalenivorans
Polaromonas sp. JS666
Polynucleobacter necessarius
Porphyromonas gingivalis
Prevotella copri
Prevotella denticola
Prevotella melaninogenica
Prochlorococcus marinus
Propionibacterium acnes
Proteus mirabilis
Proteus vulgaris
Pseudoalteromonas atlantica
Pseudoalteromonas haloplanktis
Pseudoalteromonas tunicata D2
Pseudomonadota
Pseudomonas
Pseudomonas aeruginosa
Pseudomonas aeruginosa group
Pseudomonas entomophila
Pseudomonas fluorescens
Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens PfO-1
Pseudomonas protegens Pf-5
Pseudomonas putida
Pseudomonas savastanoi
Pseudomonas syringae
Pseudomonas syringae group genomosp. 3
Pseudovibrio sp. JE062
Pseudoxanthomonas
Psychrobacter arcticus
Psychrobacter cryohalolentis
Psychrobacter sp.
Psychroflexus torquis
Psychromonas aquimarina
Ralstonia metallidurans CH34
Ralstonia pickettii
Ralstonia solanacearum
Reinekea blandensis
Renibacterium salmoninarum ATCC 33209
Rhizobium etli
Rhizobium leguminosarum
Rhodobacter capsulatus
Rhodobacter sphaeroides
Rhodobacteraceae bacterium HTCC2150
Rhodobacterales
Rhodococcus equi
Rhodococcus jostii
Rhodococcus opacus
Rhodococcus opacus PD630
Rhodopirellula baltica
Rhodopseudomonas palustris
Rhodospirillum rubrum
Rickettsia conorii
Rickettsia sibirica
Rickettsia typhi
Robiginitalea biformata
Roseburia intestinalis
Roseiflexus castenholzii
Roseiflexus sp. RS-1
Roseobacter
Roseobacter denitrificans
Roseobacter sp. MED193
Roseovarius
Roseovarius nubinhibens
Roseovarius sp. 217
Rothia mucilaginosa
Rubrobacter xylanophilus
Ruegeria pomeroyi
Ruegeria sp. TM1040
Ruminococcus albus
Ruminococcus gnavus
Ruminococcus obeum
Saccharomonospora viridis
Saccharophagus degradans
Saccharopolyspora erythraea
Saccharothrix espanaensis
Sagittula stellata
Salinibacter ruber
Salinispora arenicola
Salinispora tropica CNB-440
Salmonella choleraesuis
Salmonella enterica
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Salmonella typhimurium
Salmonella typhimurium LT2
Sandaracinus amylolyticus
Sanguibacter keddieii
Sebaldella termitidis
Sediminihabitans luteus
Selenomonas ruminantium
Serratia proteamaculans
Shewanella amazonensis
Shewanella baltica
Shewanella denitrificans
Shewanella denitrificans os-217
Shewanella frigidimarina
Shewanella loihica
Shewanella oneidensis
Shewanella pealeana
Shewanella putrefaciens
Shewanella sp. ANA-3
Shewanella sp. MR-4
Shewanella sp. PV-4
Shewanella sp. W3-18-1
Shewanella woodyi
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Silanimonas lenta
Silicibacter pomeroyi
Silicibacter pomeroyi DSS-3
Silicibacter sp. TM1040
Sinorhizobium fredii
Sinorhizobium medicae
Sinorhizobium meliloti
Slackia heliotrinireducens
Sphaerobacter thermophilus
Sphingomonas paucimobilis
Sphingomonas sp.
Sphingomonas sp. SKA58
Sphingopyxis alaskensis
Spirosoma linguale
Stackebrandtia nassauensis
Staphylococcus aureus
Staphylococcus aureus subsp. aureus N315
Staphylococcus epidermidis
Staphylococcus haemolyticus
Staphylococcus saprophyticus
Stigmatella aurantiaca
Streptoalloteichus hindustanus
Streptobacillus moniliformis
Streptococcus
Streptococcus acidominimus
Streptococcus agalactiae
Streptococcus gallolyticus
Streptococcus mitis
Streptococcus mutans
Streptococcus pneumoniae
Streptococcus pyogenes
Streptococcus pyogenes SF370
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus suis
Streptococcus thermophilus
Streptomyces
Streptomyces albus
Streptomyces ambofaciens
Streptomyces atroolivaceus
Streptomyces avermitilis
Streptomyces carzinostaticus
Streptomyces clavuligerus
Streptomyces coelicolor
Streptomyces flavoviridis
Streptomyces globisporus
Streptomyces griseochromogenes
Streptomyces griseoruber
Streptomyces griseus
Streptomyces laurentii
Streptomyces lividans
Streptomyces nanchangensis
Streptomyces platensis
Streptomyces verticillus
Streptosporangium roseum
Subtercola sp. Z020
Sulfitobacter sp. EE-36
Sulfitobacter sp. NAS-14.1
Sulfurimonas denitrificans
Sulfurospirillum deleyianum
Symbiobacterium thermophilum
Synechococcus elongatus
Synechococcus sp.
Synechococcus sp. CC9902
Synechococcus sp. JA-2-3B'a(2-13)
Synechococcus sp. PCC 7002
Synechococcus sp. WH 8102
Synechocystis sp.
Synechocystis sp. PCC 6803
Syntrophobacter fumaroxidans
Syntrophomonas wolfei
Syntrophus aciditrophicus
Thermanaerovibrio acidaminovorans
Thermoanaerobacter brockii
Thermoanaerobacter ethanolicus
Thermoanaerobacter pseudethanolicus
Thermoanaerobacter sp. X514
Thermoanaerobacterium thermosulfurigenes
Thermobifida fusca
Thermobispora bispora
Thermomonas haemolytica
Thermomonospora curvata
Thermosynechococcus elongatus
Thermotoga lettingae TMO
Thermotoga maritima
Thermotoga petrophila
Thermotogales
Thermus thermophilus
Thiobacillus denitrificans
Thiomicrospira crunogena
Treponema denticola
Treponema denticola ATCC 35405
Treponema pallidum
Trichodesmium erythraeum
Trueperella bernardiae
Tsukamurella paurometabola
Ureaplasma parvum
Vallicoccus soli
Veillonella parvula
Verminephrobacter eiseniae
Vibrio cholerae
Vibrio cholerae (unspecified strain)
Vibrio fischeri
Vibrio natriegens
Vibrio parahaemolyticus
Vibrio vulnificus
Vibrionales bacterium SWAT-3
Wenzhouxiangella sediminis
Wolbachia sp.
Wolinella succinogenes
Xanthobacter autotrophicus
Xanthomonas axonopodis
Xanthomonas campestris
Xanthomonas citri
Xanthomonas oryzae
Xanthomonas translucens
Xenorhabdus bovienii SS-2004
Xenorhabdus nematophila ATCC 19061
Xylanimonas cellulosilytica DSM 15894
Xylella fastidiosa
Yersinia bercovieri
Yersinia enterocolitica
Yersinia enterocolitica W22703
Yersinia intermedia
Yersinia mollaretii
Yersinia pestis
Yersinia pestis KIM D27
Yersinia pseudotuberculosis
Zymomonas mobilis
[Ruminococcus] torques
ampylobacter jejuni
cyanobiont of Azolla filiculoides
marine actinobacterium PHSC20C1
uncultured Ruminococcus sp.
uncultured bacterium

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Eukaryota

Aequorea victoria
Anopheles gambiae
Aphodius variabilis
Arabidopsis thaliana
Aspergillus fumigatus
Aspergillus oryzae
Blastomyces dermatitidis
Bos indicus
Bos mutus
Bos taurus
Bubalus bubalis
Caenorhabditis elegans
Candida albicans
Candida glabrata
Candida verbasci
Cavia porcellus
Chaetomium thermophilum
Chlamydomonas reinhardtii
Chlorella vulgaris
Coccidioides immitis
Coccidioides posadasii
Cryptococcus gattii VGI
Cryptococcus neoformans
Cryptosporidium parvum
Cyanidioschyzon merolae
Danio rerio
Debaryomyces hansenii
Dictyostelium discoideum
Drosophila melanogaster
Eleutherodactylus coqui
Emericella nidulans
Encephalitozoon cuniculi
Entamoeba histolytica
Enterocytozoon bieneusi
Eremothecium gossypii
Fundulus heteroclitus
Galdieria sulphuraria
Gallus gallus
Giardia intestinalis
Gibberella zeae
Glycine max
Gracilaria tenuistipitata
Histoplasma mississippiense (nom. inval.)
Homo sapiens
Hordeum vulgare
Kluyveromyces lactis
Lachancea thermotolerans
Leishmania donovani
Leishmania major
Leishmania mexicana
Leucoraja erinacea
Lodderomyces elongisporus
Lomentospora prolificans
Luciola mingrelica
Macaca mulatta
Magnaporthe grisea
Meyerozyma guilliermondii
Mus musculus
Neosartorya fischeri
Nicotiana tabacum
Oryza sativa
Ovis aries
Photinus pyralis
Pichia pastoris
Pichia stipitis
Plasmodium berghei
Plasmodium falciparum
Plethodon cinereus
Pneumocystis carinii
Pneumocystis jirovecii
Pneumocystis murina
Pontellina plumata
Rattus norvegicus
Rhizopus delemar
Saccharomyces bayanus
Saccharomyces castellii
Saccharomyces cerevisiae
Saccharomyces cerevisiae S288c
Saccharomyces kluyveri
Saccharomyces kudriavzevii
Saccharomyces mikatae
Saccharomyces paradoxus
Salmo salar
Scedosporium apiospermum
Scheffersomyces stipitis
Schistosoma japonicum
Schistosoma japonicum and Saccharomyces cerevisiae (synthetic)
Schizosaccharomyces pombe
Sclerotinia sclerotiorum
Solanum bulbocastanum
Solanum lycopersicum
Solanum tuberosum
Squalus acanthias
Strongylocentrotus purpuratus
Tetraodon nigroviridis
Toxoplasma gondii
Toxoplasma gondii GT1
Trichomonas vaginalis
Triticum aestivum
Trypanosoma brucei
Trypanosoma cruzi
Vanderwaltozyma polyspora
Xenopus laevis
Xenopus tropicalis

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Virus

Adeno-associated virus - 1
Adeno-associated virus - 2
Adeno-associated virus - 5
Adeno-associated virus - 7
Adeno-associated virus - 8
Adeno-associated virus 9
Adenovirus
African swine fever virus
Aichi virus 1
Alphacoronavirus 1
Alphapapillomavirus
Alphapapillomavirus 5
Alphapapillomavirus 7
Alphapapillomavirus 9
Avian reovirus
Bacillus phage phBC6A51
Betapapillomavirus 4
Bocaparvovirus primate1
Bovine papillomavirus
Bundibugyo virus
Burkholderia phage phi52237
California encephalitis virus
Caudovirales
Cercopithecine herpesvirus 17
Chikungunya virus
Clostridium phage c-st
Cowpox virus
Coxsackievirus A10
Coxsackievirus A16
Coxsackievirus A2
Coxsackievirus A22
Coxsackievirus A24
Coxsackievirus A4
Coxsackievirus A5
Coxsackievirus A6
Coxsackievirus A8
Coxsackievirus A9
Coxsackievirus B1
Coxsackievirus B2
Coxsackievirus B3
Coxsackievirus B5
Coxsackievirus B6
Cytomegalovirus
Dengue virus
Eastern equine encephalitis virus
Echovirus 9 strain Barty
Echovirus E11
Echovirus E13
Echovirus E14
Echovirus E18 isolate NSW-V13A-2008-ECHO18
Echovirus E21
Echovirus E25
Echovirus E3
Echovirus E30
Echovirus E4
Echovirus E7
Encephalomyocarditis virus
Enterobacteria phage CP-1639
Enterobacteria phage P1
Enterobacteria phage P22
Enterobacteria phage PsP3
Enterobacteria phage RB43
Enterobacteria phage lambda
Enterovirus A71 strain Hau1
Enterovirus C
Enterovirus D68
Epstein-Barr virus
Escherichia phage N4
Foot-and-mouth disease virus
GB virus C
Gallid herpesvirus 2
H1N1 subtype
H3N2 subtype
HIV-1 M:B
HIV-1 O_ANT70
HIV-2 subtype A
Haemophilus influenzae
Hepatitis B virus
Hepatitis C virus
Hepatitis C virus genotype 1
Hepatitis E virus
Hepatovirus A
Human Endogenous Retrovirus IDDMK1,2-22
Human adenovirus 41
Human adenovirus C
Human alphaherpesvirus 2
Human astrovirus
Human betaherpesvirus 5
Human betaherpesvirus 6A
Human betaherpesvirus 6B
Human betaherpesvirus 7
Human bocavirus 2c PK
Human bocavirus 3
Human bocavirus 4 NI
Human coronavirus 229E
Human coronavirus HKU1
Human coronavirus NL63
Human coronavirus OC43
Human coxsackievirus B4
Human gammaherpesvirus 8
Human herpesvirus 1
Human herpesvirus 2
Human herpesvirus 3
Human herpesvirus 4
Human herpesvirus 5
Human herpesvirus 6A
Human herpesvirus 7
Human herpesvirus 8
Human immunodeficiency virus 1
Human mastadenovirus A
Human mastadenovirus B
Human mastadenovirus C
Human mastadenovirus D
Human mastadenovirus F
Human metapneumovirus
Human orthopneumovirus
Human papillomavirus
Human papillomavirus 9
Human papillomavirus type 11
Human papillomavirus type 16
Human papillomavirus type 18
Human papillomavirus type 33
Human papillomavirus type 34
Human papillomavirus type 5
Human papillomavirus type 6
Human papillomavirus type 6b
Human papillomavirus type 8
Human parainfluenza virus 4a
Human parechovirus 1
Human parechovirus 6
Human picobirnavirus
Human poliovirus 2
Human polyomavirus 1
Human respiratory syncytial virus B
Human respirovirus 1
Human respirovirus 3
Human rhinovirus A1
Human rotavirus C
Human rubulavirus 2
Influenza A virus
Influenza B virus (B/Lee/1940)
Influenza C virus (C/Ann Arbor/1/50)
JC polyomavirus
Klebsiella pneumoniae
Lactobacillus phage phiadh
Lactococcus phage bIL310
Listeria phage A118
Lymphocryptovirus
Macaca mulatta polyomavirus 1
Macacine herpesvirus 5
Mamastrovirus 1
Mamastrovirus 3
Marburg marburgvirus
Measles morbillivirus
Measles virus
Middle East respiratory syndrome coronavirus
Monkeypox virus
Mumps virus
Murine coronavirus
Norovirus GI/Hu/JP/2007/GI.P3_GI.3/Shimizu/KK2866
Norovirus GII
Norwalk virus
Onyong-nyong virus
Orthoflavivirus denguei
Orthoflavivirus japonicum
Orthopneumovirus bovis
Orthorubulavirus hominis
Paramecium bursaria Chlorella virus 1
Parechovirus A
Potyvirus
Primate bocavirus 1
Pseudomonas phage phiKZ
Rabies lyssavirus
Rhinovirus A
Rhinovirus B
Rhinovirus C
Roseolovirus humanbeta6b
Rotavirus
Rotavirus A
Rubella virus
Salivirus NG-J1
Sapporo virus
Sapporo virus isolate Hu/GV/0003/Sollentuna/2016/SWE
Semliki Forest virus
Severe acute respiratory syndrome coronavirus 2
Severe acute respiratory syndrome-related coronavirus
Simian virus 40
Simplexvirus
Sindbis virus
Small anellovirus
Staphylococcus phage G1
Sudan ebolavirus
Synechocystis sp. (strain PCC 6803 / Kazusa)
Tick-borne encephalitis virus
Tioman virus
Tobacco etch virus
Torque teno midi virus 1
Torque teno mini virus 1
Torque teno virus 3
Torque teno virus 5
Torque teno virus 7
Torque teno virus 8
Vaccinia virus WR
Vesicular stomatitis Indiana virus
Vibrio phage VHML
Viruses
West Nile virus
Yellow fever virus
Zaire ebolavirus
Zika virus

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Other

Environmental genome shotgun sequencing of the Sargasso Sea
Global Ocean Survey
Transposon Tn4551
Unknown
metagenome sequence